Basic Information

Insect: Xanthorhoe designata
Gene Symbol: TUBGCP4
Assembly: GCA_963582015.1
Location: OY757032.1:6261247-6265203[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-08 1.4e-05 25.3 0.1 2 40 115 153 114 157 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-08	1.4e-05	25.3	0.1	2	40	115	153	114	157	0.92

Sequence Information

Coding Sequence: ATGCGTGATAATGTTAGGGCGTACCCCCCAGGCGACGCGCAGGTGCAGCACCCGGCGCCTGTGAGAAATGGACTAGGGTTGTCGCATCAGGGACGGGTGCGACGTAAGAGGCGAGTCCGGGAAGTAAGAATGAGGATGGCAAGCTGGAATGTAGGAACGATGACTGGGAGAGGAAGGGAGTTAGCGGATGTTTTAGAAAGAAGACGGATAAATGTGGCGTGCTTGCAGGAGACTAGATGGAAGGGTACGAGAGCTAGAGAGATTGGAATGGGTTATAAGTTCTTTTATTGTGGAAGTGATGTGTCTACGATCACGATGCCTCCTAAACGGGCATTGTGGTCACAAGATGACCTGGTCTCAGCTGTTCGCGCAGTTCAGAGAGGAATTTTGAGTACATATGCGGCTGCGGAAAGATACAGGATTCCAAGAAGAACCATCAGAAACCATGTCGAGAGTGGTGTTGTGGTGAAAAGCTTGGGTCGTAAGCCCGTATTGAATCCCGAACAGGAAGCTGATCTTGTAAAGAGGATAATCAGGTATGCGGAAATAAGTTTACCTGTCACACCAAGAATACTGCGTCGGTTGGTGTACAAATATTGCGAGCTTAATAACATAAAGCATAATTTTGATGAGACTGCTAAACGCGCAGGTAAAGACTGGCTTAAGGCGTTTATGAAAAGACATCCCGAATTGTCTATACGAAAAGCACAGTTCATGAACCCTGCTAGAGCCCAAAagctaaataaatttattgtagATGACCACTTTGAAAGACTGAATGAAGTTTATGATAAACTGGAGCTGAAAGATCATCCAGAAAGAATTTATAACATGGATGAGAAGGGATGCCGTCTGACAATCCATCACCAGCAAAGTGTTTTGGCCAAAAAAGGAGCAAAAAGGGTTCATTTGCAGTCTTATGAACATGTAGAAAGTGTGACTATCGCAGGATGTGTGACCGCACTCTGTACTGCTATACCGCCAATGGTGATATTCAAGGGACAACGTTTGAAGCCAGAATTGTACGACAATTTGCCACCGGGTTCTTTGGTTGAAAAGTCTGCAAAGGGGTACATGACAAACGAGCTTttcaaagaatttttgaaacatCTGGCCAGATACAAAAGCGCAGGACCTTGCCTCTTGATATTTGATGGAGCAGCATGTCATTTAGACCTTTCCATTGTCGATGCGATACCAGAAACAGCCTTCGCTCCTTCAATTTTGACAGAAGCCCCAGCGCCAGCGCCTGCTGATGGTGAACAAGGAAACATGCAACCTCTTGATAATTCTGGGATCGAAACTCCAGAACGAGAATCACCATCAATTTTGACAGAGGCGTTAACGCCTGATCTTATAGAAGAGAATGTGTTACCTGTGGATTATGCTAGGCAAAAGACTCCAGAAGCTGATACTTTAGATCGCCAGCCAAATTTTTATCAGAAGTATTACCAAATCAACAGACCCCAAGTCAACCAAACGCGAAACGCAGCTATTATCGCCAAATTTATGGAACTTCTTCAACTCAACTCAGCTTCAAATCACAGAATGTATGGCCTTTACACCCAAGTACTAAGTGAAGGCATCATTGAAGTGCTCCAATCATACAAGAAAACACTAGTGGATGTTGAAAGCTTGGTAATCGGCAACCATAACTATACACTATCATATGTGTACAGCTATGTTGAGAAGTATTATAGTATCTTTAATACACTAAATAGAGTTATAACAACAATTAAGGAGAGGAGGTTGACAGGATGCCAAGTTTTGAGTCTCCTTCATCAGTACATTTTGAACGGGAATGAGAAAGTACATGAAGCTATTATACAAATATTCTCATGCATGAACAAAGTGTTCATAAACCAGCTGTGCTCATGGTTGCTATATGGTGAACTGAGAGACCCATACCAAGAGTTCTTCATATTCCGGAACCCAAAAGAAGAAACGTCAGATACATTCCTATCATCACCATCTACTTCGAACACATGTGATAAATCTCTTGTGTCCACTCTCCAAGATACAACGCTAGACTGCGGCTTCAATCTCAACCCGAGCATGATTCCGTACTTCGTGCCTCTCTCTCTGGCCCAAGAGATTCTCTTCATTGGCAAGACAGTCATACTCTTCGGCTTCGACCCTAAGAAGGTGAAGAGGAATAGCAGTTTTACAGTGAACAGAACTATGGTGCCGCTGCAGAAATGCGGCCTTGATTCTAGAAGGTTTACGATCTGGGAAGAAAAGGAATCAGTATACCACGAGAAACTGCAGCAACTAAAGAATCCTGAAGTGTTTGAAGCCTGCAGTCTTAGGACTGTTGTCAGGGAGATTAAGGAGTGTGTGACCAAGCATCTCTGGACGGTGGCAGTCGAGGAGGCTCAACTAATACACGAGCTGAGGCTAATGAAAGATTTCTATCTGCTGGGTCGCGGTGAACTTTTCCTAGAGCTGTTGCGTTTGACCGCGCATAAGCTTGACAAACCGACCGCTAGGACTTCTACTAGAGATATGAACCACGCATTCCAGTTAGCAGCTAGAGCAGTATTCTTAAGCAACAACTCGGATATAGAGAAGTTTAGCTTCGAACTGCCGTATGTGAAGCCAAACGCCTCTAACAACAGCGGCAACTCGTCTGTGGAAGATGACGGCAGCATTGTGGCAGACGGTTGGTccagtataatattaaaatacgaCTTCAAATGGCCACTTCACCTTTTATTCACGCCCGAAGTTCTGGCCCGGTATAATGACATGTTCCGTCTACTGCTGCGGATAAAGAAAACTCAGCACGATCTTCATGCGTTATGGAAAACTTACAAGCAATCTGCTAGTTTCCCCATGTGTCAACTTCACAACAAACTGATGTTCCTAATGGACAATCTGCAACATTACCTACAGTCCGATGTACTAGAGACTAACTTCTCACGACTAATGGATGCTGTGAACAAAACCAACGATTTCGAGAAACTCAAGAAATCGCACGCTTTGTTCTTGGCTGATGTGTTGAGTCAATCCTTCTTGACTGTTACTTCGTCAGCAGAAAGCGAGAGCTCAGGTGATACATTGGATTCGTTAAATAACCCAGTGTTCTGCAATATAATGGAGCTGCTCAAACTCTGTCATTCCTTCTGCAGTATTAACGAATTTGCATCAGATAGGGAGGCGGAGGATTACTATATCAGAGGATATTCCGAGAGATTTAATAAGCTAGTAAAACAGTTGATGCAGTTACTGGTATCCCTAAGAGACCGTCCGTGTGGCGTGTTCCTAGCTCGCCTACTAATGAGACTTGATTACAATCGCTGGCTCAGCGGCGAAGCACAACTCTCACAGTCTGTCACTAATATGCTGAGATATTGA
Protein Sequence: MRDNVRAYPPGDAQVQHPAPVRNGLGLSHQGRVRRKRRVREVRMRMASWNVGTMTGRGRELADVLERRRINVACLQETRWKGTRAREIGMGYKFFYCGSDVSTITMPPKRALWSQDDLVSAVRAVQRGILSTYAAAERYRIPRRTIRNHVESGVVVKSLGRKPVLNPEQEADLVKRIIRYAEISLPVTPRILRRLVYKYCELNNIKHNFDETAKRAGKDWLKAFMKRHPELSIRKAQFMNPARAQKLNKFIVDDHFERLNEVYDKLELKDHPERIYNMDEKGCRLTIHHQQSVLAKKGAKRVHLQSYEHVESVTIAGCVTALCTAIPPMVIFKGQRLKPELYDNLPPGSLVEKSAKGYMTNELFKEFLKHLARYKSAGPCLLIFDGAACHLDLSIVDAIPETAFAPSILTEAPAPAPADGEQGNMQPLDNSGIETPERESPSILTEALTPDLIEENVLPVDYARQKTPEADTLDRQPNFYQKYYQINRPQVNQTRNAAIIAKFMELLQLNSASNHRMYGLYTQVLSEGIIEVLQSYKKTLVDVESLVIGNHNYTLSYVYSYVEKYYSIFNTLNRVITTIKERRLTGCQVLSLLHQYILNGNEKVHEAIIQIFSCMNKVFINQLCSWLLYGELRDPYQEFFIFRNPKEETSDTFLSSPSTSNTCDKSLVSTLQDTTLDCGFNLNPSMIPYFVPLSLAQEILFIGKTVILFGFDPKKVKRNSSFTVNRTMVPLQKCGLDSRRFTIWEEKESVYHEKLQQLKNPEVFEACSLRTVVREIKECVTKHLWTVAVEEAQLIHELRLMKDFYLLGRGELFLELLRLTAHKLDKPTARTSTRDMNHAFQLAARAVFLSNNSDIEKFSFELPYVKPNASNNSGNSSVEDDGSIVADGWSSIILKYDFKWPLHLLFTPEVLARYNDMFRLLLRIKKTQHDLHALWKTYKQSASFPMCQLHNKLMFLMDNLQHYLQSDVLETNFSRLMDAVNKTNDFEKLKKSHALFLADVLSQSFLTVTSSAESESSGDTLDSLNNPVFCNIMELLKLCHSFCSINEFASDREAEDYYIRGYSERFNKLVKQLMQLLVSLRDRPCGVFLARLLMRLDYNRWLSGEAQLSQSVTNMLRY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01528228; iTF_01528230;
90% Identity: iTF_01528228; iTF_01528230;
80% Identity: iTF_01528230;