Xdes008676.1
Basic Information
- Insect
- Xanthorhoe designata
- Gene Symbol
- lolal
- Assembly
- GCA_963582015.1
- Location
- OY757035.1:13293986-13299692[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-16 4.4e-13 49.3 0.0 1 42 343 385 343 388 0.94
Sequence Information
- Coding Sequence
- ATGGCCCAGCAATACAGCTTAAAATGGAACAACCACCAGCCCAATTTCATCTCGATGTTTGCAATACTCCGCAACACGCAAGCCTTGGTTGACGTCACACTGGCCGCTGAAGGCAGACACTTACACGCTCACAAAACAGTTCTTTCAGCCTGCAGTCCCTACTTCCACTCACTTTTCGTCGAGAACCCCTCACAGCACCCCATTGTAATTCTGAAGGATGTCACGTTCGCTGACCTGCGCACTATCGTCGACTTCATGTACTACGGAGAAGTCAACATCACACAGGAGGAGTTGCCTCAGATGTTGCATTCAGCAAAGTCTCTGAAAGTGAAAGGCCTCACCGAAACAGAGCCGACATCTGTTATGCGATCGCAATCATCAGAGTTTCCATATGAGCAGTCGGGCGAGGTGAGCGGCGAGCAGTCAGGCGAGCCCCGCGGTGACGTCACTGGCGACCAAGCCAGGGAACCATCCAATGAGTCCACTAACGAACAGCCCCACGAGGTTGAACCACAGCGACGGCAAACCCCGTCTCCTAATGGCTCACCGGCTGCGAAACGACGACGATGCCGCAAGAGTTCAAACATATCTACATCAATAAACATGGTGGGCGAAGAAAACCGCGAGGACGGCGCCCTGGAGATAGTGAGGGAGGATATAACGCTAAGCAGCGTCACGCCACGGCGCCGTGAGTTCTCGCACGAAGATAACACGCAGCAGaaTTCCGAGCCTCAGAACATAAATATAGACGATTTAAATGTGAACCACAACACCACCGGCATGCCACAAGGAGGTCAGTGGAGTATGATGGAGCACACTTACCCGCGGTATACGAACTCGTGCTTCGGGTCCGCGCCGGCGGAGGGCGGCGGCGTGTACATGGGTGGCATGATGGGCGGCGCGCTCGAGGGGGAGCTGGGCGGGtggggcggggggggcgcggggggcggggcgggggggcTGCCCGCCGCGCCGCTCGCGGACCCGCCGCCGCAGCCCAAGCGCCGCCGCACCACCAACCCGCAGTCGGAGGAGAACTTCCAGCGCGCGCTCGAGGCCGTGCGCATCGGCGGCATCGGCTTCTGCAAGGCGGCGCGCATGTTCGGCGTCAACAACCGCACCCTCTGGCTGGAGTACAAGAAGAAGGGCTACCCCAACAACCGGCCGAGCATCAAGAGCCGCATCAAGCGCGAGCACgcgacgccgccgccgccgcacaAGGACGAGGCGCCGCCGCCCGCCGACCACCACATGGCGCTCGTATGCCAGCCCCAGCACGCGCATGCGCACGCGCACGCGCACCCCCCCCACCCCCCGCCGCACCACCTCTCGCTCGGCTTCGTCGAGTCGCGCACGCTGGACCTGCCGCTGCAGACCATGAACATCCTCGGCGGGCTCAACTTCAACTCCATGCAATAG
- Protein Sequence
- MAQQYSLKWNNHQPNFISMFAILRNTQALVDVTLAAEGRHLHAHKTVLSACSPYFHSLFVENPSQHPIVILKDVTFADLRTIVDFMYYGEVNITQEELPQMLHSAKSLKVKGLTETEPTSVMRSQSSEFPYEQSGEVSGEQSGEPRGDVTGDQAREPSNESTNEQPHEVEPQRRQTPSPNGSPAAKRRRCRKSSNISTSINMVGEENREDGALEIVREDITLSSVTPRRREFSHEDNTQQNSEPQNINIDDLNVNHNTTGMPQGGQWSMMEHTYPRYTNSCFGSAPAEGGGVYMGGMMGGALEGELGGWGGGGAGGGAGGLPAAPLADPPPQPKRRRTTNPQSEENFQRALEAVRIGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHATPPPPHKDEAPPPADHHMALVCQPQHAHAHAHAHPPHPPPHHLSLGFVESRTLDLPLQTMNILGGLNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01529120;
- 90% Identity
- iTF_01528431;
- 80% Identity
- iTF_01528431;