Xdes021313.1
Basic Information
- Insect
- Xanthorhoe designata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963582015.1
- Location
- OY757052.1:6208813-6256436[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.2 3.4e+03 -1.5 0.0 18 27 31 40 29 40 0.91 2 3 3.6e-14 2.9e-11 43.5 0.0 1 38 347 385 347 389 0.94 3 3 2e-18 1.6e-15 57.1 0.0 1 43 549 592 549 594 0.95
Sequence Information
- Coding Sequence
- ATGATGAGGTACCCGGTGGATATAATGGCCATCAACGAGACGTGGCTTCGGACGGGCCAGGAGGCGCgtgcgcccgcgccgcccggGTACAGTCTGCGGCACGCGCCGCGGCACTACGGGCGCGCCGCCGGCGGCCGCCAACGCGGTGGCGGCGTCGGCTTTTACATCAAGCAGGGCGTCAATGCGCGCCTCCTCGCCCATCCTGAGACGCCGGGCGTCGACCAGATGTGGCTCCGTCTCACTTTAAACGGCCGCAAATTAGCAATAGGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAGCAATACCAGGACACACTGATCCCGAAGCCAGAAGAGTCCAGCGACGAAGATTCCATGCCATCCACCGACCAGCCGCCCGCGCTAAAGATAAAAACCATCGAGCAGATCAACGAAGACGATGGCCCGAAGCGCCCGGAGACTATCCTGGAGAGTCTGATCAAGAGACCAGCTACGCAGCCGAAGCTAGAGCTGGCGGAGGAGCCGACGGATTGGAAGCCCCCGGACAAGTGCTACTTCTGCACTGACGGGGAGAAGGGGGAGGCTGCGGAGCCCCAGCCGCAAGGGGGCGCCACGAGTCCTGCGTCGGAGTCTGACAGCAGCTCCGTGTCGGGCAGCAAGagccccgccgccgccgcgccgcagCTGCTGCAGAACCTGCTGCAGCTGCACGCACAGAACCCTCAGGGCATCGCTCAGCATGATGTGCTTCAGTTCCAGCAGATAAtggcggcgctggcggcggtGGGCACGGGGCTGGTGATGCCGCCCTTCACGCCCAACTGGATGCTGCCCAGGATGATGCAGAACAGGCAGCAGTGTGATACGCTAGCGGACGACAAGGCAGCCCCCTCGTCCCCGCTACCAACAGAACAGCCCCTGGACCTCAGCGCCAAGTCCACCTCCAGCACCAGCGGCACCCCGCCGCCTGATGCCAAGAACCTGGACAACAGATTGAAACGCGCGGCCCTCGATGGAGCCAACAGCACAACCAAACGGAATTACACGGAAGACGAGCTCCAATCAGCACTTCGCGACATCCAGACCGGCCGGCTCGGCACCAGGCGCGCGGCCGTAGTCTATGGCATCCCTCGCTCCACCCTCCGGAACAAAGTCAACAAGTTCGGCCTCACTCCTGACCAACATGAGTCAGAACCGGACAGCGACCTGGAAAGAACTGAGTCCCCGCCCTCGGTTATCCTCAAAATCCCGACCTTCCCCCCACCGGACGAGAAGAGTCCATCGCCTGCCACCCCAGTGACCACGCCGATAACTCCCATCACACCCAACTTCCACAACAATCAAACGCCACTACTGCTCCCGCCATCTGTGTACGCTGATCCTCCGACGCAACTCTACACATCTCTCAGCGATGTGATAGCCAAGAGCATCAGCCAGAAGTTCCAGCAGCCGCTGGATAGAACCCAAGCGGAGATGCAGCAGTTCATGCGCGCTCCGGACCGACACGTCTCCGTCATCAAAACCCCTCCCGACAACCACCACAGGAACTATCAGATGCCGAGCAACTCCCGATCTGTCTCCAACAACAACGGACAAGGGGCCGCAGGTGGAAAAGGAACTCGCCCTAAACGAGGAAAGTATAGAAACTACGATAGAGACAGTTTGGTCGAGGCTGTGAAGGCGGTCCAGAGAGGTGAGATGTCGGTCCACAGAGCCGGTTCATACTACGGCGTCCCGCACTCGACGCTCGAGTACAAGGTCAAAGAGCGTCACTTGATGCGGCCGAGGAAACGCGAGCCGAAGCCCCAGCCCGACGTGAAGCCCCAACCTCCGAAGCCACAGCCCCCCAAACCGGCGACAAAACCCTTCTCCAACGGACTCAACGGGCCCGAAACTGGAGGCTACCCCCCAGGGTACCCGTTCTGGCCGGGAGCCAGCTACGCGCAGCATCTGTCATCTCCCGCTCCGGATCTCTACGCATCGCACATGATGCGCCGACTGCGCGAGGAGGCGCCTCCGCCAGCGAACGGCTCCTTCCTCGAAGGGATCATCAGGTCTAGCTTGGAGCGGCCGCTGATGCAGCGGCTGACGGCGGAGCCGAGGGTGCCGGGGGTGGGGGGGGTGGGGCAGGACTCGCCGAGCTTGCTGCGGCGGCTGGCGGGCACCGCTTCGCCCGAAGACGCGCCGCCTGCCCGCCGCCCCCGCCTCGACAGCTCGGACCGGCAGCTGGCGGCCGAGATGCGCGAGGCGGTGCAGCGACTGCGCGCCGACAAGCTGCGGCCCCGCAACGGGACCCCCACGCCCCCCCTCTCGCCCCCGCcggcgccccccgcgccccccgacCGCGCCTAG
- Protein Sequence
- MMRYPVDIMAINETWLRTGQEARAPAPPGYSLRHAPRHYGRAAGGRQRGGGVGFYIKQGVNARLLAHPETPGVDQMWLRLTLNGRKLAIGLERVAEELMGRRKWKQYQDTLIPKPEESSDEDSMPSTDQPPALKIKTIEQINEDDGPKRPETILESLIKRPATQPKLELAEEPTDWKPPDKCYFCTDGEKGEAAEPQPQGGATSPASESDSSSVSGSKSPAAAAPQLLQNLLQLHAQNPQGIAQHDVLQFQQIMAALAAVGTGLVMPPFTPNWMLPRMMQNRQQCDTLADDKAAPSSPLPTEQPLDLSAKSTSSTSGTPPPDAKNLDNRLKRAALDGANSTTKRNYTEDELQSALRDIQTGRLGTRRAAVVYGIPRSTLRNKVNKFGLTPDQHESEPDSDLERTESPPSVILKIPTFPPPDEKSPSPATPVTTPITPITPNFHNNQTPLLLPPSVYADPPTQLYTSLSDVIAKSISQKFQQPLDRTQAEMQQFMRAPDRHVSVIKTPPDNHHRNYQMPSNSRSVSNNNGQGAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDVKPQPPKPQPPKPATKPFSNGLNGPETGGYPPGYPFWPGASYAQHLSSPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPLMQRLTAEPRVPGVGGVGQDSPSLLRRLAGTASPEDAPPARRPRLDSSDRQLAAEMREAVQRLRADKLRPRNGTPTPPLSPPPAPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00702817; iTF_00698193; iTF_01529117;
- 90% Identity
- -
- 80% Identity
- -