Basic Information

Gene Symbol
ct
Assembly
GCA_963582015.1
Location
OY757029.1:9128709-9157917[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.2e-27 4.2e-23 81.7 0.0 3 70 219 287 217 294 0.94
2 3 7.2e-32 4.9e-28 97.5 0.0 4 77 620 694 618 696 0.96
3 3 1e-30 7e-27 93.8 0.0 3 75 823 896 821 900 0.95

Sequence Information

Coding Sequence
ATGGTCACAGTCCACCGCTCCTCCACGCTTCTTACTCCGAGTCAATCGACGAAATTCAACATCGCGCAGCTAGTAGAAGACGTGCGCAGACTCCAGGCGTCGCTGTCAGCGCTGCAGGAAGCGCACGCGCAGCAGCTGCAGCGGCTGGAAGAGCGCCTGGACGAGAAGAAGCAGCACATCGCCCGGCTTGAAGCCAGGCTTGACGGCCAGCGGGATTACGATGAAGTAAAGCGGGAAGTCAACATGCTTCGCTCGCTCGACTTAGGCCCAAGCGATCGCATCATGGGTATGGAGAGAGCCGAACGCAAACCCGAACGTTCGCCGAGCGTCGCGCCGCGCGACGAACGCAGCTCGGTCGAGCGCGAGCGCAGCGTCGAGCGAAGAGAGCCAGGTCCCGAGGAGTGGCCCAGCACGCCCCCACTCAACAACAACACAACCCATCACAACAACAACGGGCCGACACCTCTGCCGCTGCCGCCGCCGAGTCCCTTCAGATTCGACGACCACCGCCCGTACCGCTTCGCTGACGACATGGGACCTTTACCACCCGGCGCTCTTGTCGGTCGACTGGGAGACTCTCTCATCCCCAAAGGAGATCCGATGGAAGCGCGACTGCAAGAGATGCTCAGATATAACATGGACAAATACGCGAACAGTAACTTAGATACGCTTCATATCAGCAGACGAGTGAGAGAACTGCTTTCCGTTCACAATATCGGTCAGAGACTGTTCGCAAAGTACGTCCTCGGTCTGTCGCAAGGGACGGTGTCGGAGTTGCTGTCGAAGCCGAAGCCCTGGGACAAGCTGACGGAGAAGGGACGCGACTCGTACCGCAAGATGCACGCGTGGGCGTGCGACGAGGCCGCGGTGATGCTTCTCAAGTCTCTCATCCCTAAGAAAGTCGGTTCGAAAGACGGCAGCATCGGCCCGGGGGGTTTCGGGAGATCAGAAGGGGATGGGGATGACCGACTGGCGCACATTCTCAATGAGGCCTCGCATATGATGAAGACGCCTACGGGACCTCCACACAATGACGACTCTAGAAGCAACGACGACTCCAGCTCTCCGAGAACACAGTGTCAATCACCCTTCTCTAAGGACTCGAGCCAAAACCGGAGGCTAAAAAAATACGAGAACGATGATATTCCGCAGGAGAAGGTGGTTCGCATCTACCAGGAGGAGCTGGCCAAGATCATGACCAGGCGAGTGGAGGACATCCGTCACAATCGCGAAGGTTTCCCTGGTATGTTTCCCCCTTTTTTCAGCGGTGGTATGCCCCCACACATGGAGAGGCCGCCCGAAGACATCCGTATGGCTTTGGAAGCATACCACAGAGAACTCGCCAAAATCCAGCCTGGTGGCAACATCCCCAATCTCCACAACTTGCCAGGAATGCCTCCCTTCTCCAACCTGCTCGCGCTGCAGCAGCAAGCCATGCAGCAGGCCCAGAGCCAGCACATCAATGGTGGCGCCGTCCAAGATCTCTCAATCCCAAAGGACAAAATCGCCAAAATGAACGGAATGACTGATAGCGATAAGGATAGATCAATGGACGCCGAGGAGGCGATCCGACACGCGGGGAGCGCCTTCTCGCTCGTGCGGCCCAAGCTAGAGCCGGGCCAGCACTCCACCGGCTCCTCAGCCTCCAGTCCTCTAGGTAACGCGATCCTACCACCCGCCATCACCCCCAACGAAGACTTTAACAGCTCCGCCGCGGCGAGCCCGCTGCAGAGGATGGCGTCCATCACGAACAGTCTGATCTCCCAGCCGAGCAACCCGCCGCACCATACCCCCGCGCAGCGGTCCATGAAGGCGGTGCTGCCACCTATAACTCAACAACAGTTCGATCTCTTCAACAACTTGAACACGGAAGACATCGTTCGGAGGGTCAAGGAGGCTCTCAGTCAGTATTCGATCAGTCAGAGGCTTTTCGGGGAGTCGGTTCTGGGGCTCTCGCAAGGGTCCGTGAGCGACCTGCTCGCGCGGCCCAAGCCTTGGCACATGCTGACGCAGAAGGGTCGGGAGCCCTTCATCCGCATGAAGATGTTCCTCGAGGACGACAACGCGGTGCACAAGCTGGTCGCCTCGCAATACAAGATCGCGCCGGAGAAACTCATGCGGACCGGCAACTACAGCGGAGCACCGATATGTCCGCCGATGAACAAGCCGATGCCTCCAACACAAAAGATGATCTCAGACGCCACTTCGCTTCTCACCAAGATGCAGCACGAGCAACTCCTAGGCCCCGGCCACCTCGCGCACCTCGGCCACCAGCCGCCCCCCCTGCTGCTCACACCCCCCGGCTTCCCCCCGCACCACGCCGTGACTTTACCCCCACAGCACCACGATAACAACAATAAGGAGAGGAAACCCCCGCCTCCGCCCCAGCCCCACCACCAGCCTCCCATCATGCGCAGTCTGCACCAGCACATATCCCCCAGCGTCTACGAGATGGCGGCTCTCACGCAAGACCTCGACACGCAGACGATCACAACCAAAATCAAAGAGGCTCTGCTGGCGAATAACATCGGCCAGAAAATATTCGGAGAAGCCGTCCTTGGACTGTCACAGGGGTCGGTCAGCGAGCTGCTGTCCAAGCCCAAGCCCTGGCACATGTTGAGCATCAAGGGCCGAGAACCGTTCATCCGAATGCAGCTCTGGCTGAGCGACGCGCACAACATCGACCGCCTGCAAGCGCTGAAGAACGAGAGACGAGAGGCCAACAAGCGGCGGCGCTCCAGCGGCACAGGACAGGACAACTCCTCGGACACCTCCTCCAACGACACGTCTGAGTTCTACCACTCGAGCTCGCCGGGCCCCACCGCCGGCACCGGCGCCCCCTGTGCCAAGAAACAACGGGTTCTGTTCTCCGAGGAGCAGAAGGAGGCGCTGAGACTGGCGTTCGCTCTGGACCCTTACCCCAACATGCCGACGATAGAGTTCCTCGCCTCGGAGTTAGGGCTATCGACGCGAACGATAACCAACTGGTTCCACAACCACAGGATGCGGTTAAAGCAGCAGGCGCCGCACGGGCTGCCCGCCGAGCCGCCCGCGCGGGACCAGTCCTCCGCGCCCTTCGACCCCGTGCAGTTCCGGCTCCTCCTCAACCAAAGGCTGCTGGAGCTGCAGAAGGAGAGGATGGGGCTGGCCGGAGTGCCTCTGCCCTACCCGCCGTACTTCGCCGCGAACTCCAACCTCGCCGCGCTCATCGGCCGAGGGTTGCTGCCCCCCGAGGCCAGCAAGGATCAGAGCGGCGGCCTCGACCTCTCCATGCCGCTGAAGCGGGAGCCCGACGGCGAGGACTACGAGGACGACGATGTCGAGAGCAATCTCGGCTCCGAGGACTCCATGGACGACGAGTCTAAGACTGAGCCCAAGGCGGCGTCGACGCCGCAGGGCCGCTCCAGCAGACGGAAACCCGCCGCGCCGCAGTGGGTCAACCCGGACTGGCAGGAGGACAAGCCTCGCAACCCGGACGAGGTCATCATCAACGGCGTGTGCGTCATGCGCAGTGACGACTTCCGGCGCTCGGCGGAGGAGACGGTGCGCATAGAGCCGTCGCCGGCGCGCGAGCCCTccccccccgcgcccgcccTCACCCCGCGCCCGACGCACGCGCCGGATGACGTCATCCCCGAGGACAAGATCAAGTCGGAGACGGACGACGACCGGTGGGAGTACTAG
Protein Sequence
MVTVHRSSTLLTPSQSTKFNIAQLVEDVRRLQASLSALQEAHAQQLQRLEERLDEKKQHIARLEARLDGQRDYDEVKREVNMLRSLDLGPSDRIMGMERAERKPERSPSVAPRDERSSVERERSVERREPGPEEWPSTPPLNNNTTHHNNNGPTPLPLPPPSPFRFDDHRPYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKVGSKDGSIGPGGFGRSEGDGDDRLAHILNEASHMMKTPTGPPHNDDSRSNDDSSSPRTQCQSPFSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDIRHNREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFSNLLALQQQAMQQAQSQHINGGAVQDLSIPKDKIAKMNGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQHSTGSSASSPLGNAILPPAITPNEDFNSSAAASPLQRMASITNSLISQPSNPPHHTPAQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPICPPMNKPMPPTQKMISDATSLLTKMQHEQLLGPGHLAHLGHQPPPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPQPHHQPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGTGQDNSSDTSSNDTSEFYHSSSPGPTAGTGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLASELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLLPPEASKDQSGGLDLSMPLKREPDGEDYEDDDVESNLGSEDSMDDESKTEPKAASTPQGRSSRRKPAAPQWVNPDWQEDKPRNPDEVIINGVCVMRSDDFRRSAEETVRIEPSPAREPSPPAPALTPRPTHAPDDVIPEDKIKSETDDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_01443621;
80% Identity
iTF_01528175;