Basic Information

Insect: Xanthia togata
Gene Symbol: -
Assembly: GCA_963853775.1
Location: OY970800.1:5928814-5939068[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.8 6.8e+02 2.6 0.2 1 21 176 196 176 199 0.72

2 7 0.082 12 8.2 0.2 2 21 205 224 204 225 0.90

3 7 7e-05 0.0098 17.9 0.1 1 23 264 286 264 286 0.96

4 7 0.0041 0.57 12.3 4.9 1 23 292 314 292 314 0.98

5 7 0.00061 0.086 14.9 0.4 1 23 319 341 319 341 0.98

6 7 9.7e-05 0.014 17.4 0.1 3 23 349 370 347 370 0.96

7 7 1.7e-05 0.0024 19.8 1.0 2 23 378 400 377 400 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.8	6.8e+02	2.6	0.2	1	21	176	196	176	199	0.72
2	7	0.082	12	8.2	0.2	2	21	205	224	204	225	0.90
3	7	7e-05	0.0098	17.9	0.1	1	23	264	286	264	286	0.96
4	7	0.0041	0.57	12.3	4.9	1	23	292	314	292	314	0.98
5	7	0.00061	0.086	14.9	0.4	1	23	319	341	319	341	0.98
6	7	9.7e-05	0.014	17.4	0.1	3	23	349	370	347	370	0.96
7	7	1.7e-05	0.0024	19.8	1.0	2	23	378	400	377	400	0.95

Sequence Information

Coding Sequence: ATGGAGGCTGAAGACGATATGATCGTTTTGGTTATTGTTGACGATGACGAGAAAGCGAACCCGTCCGAAAAGAATTTTCCGCCTTCTGAGCCTTCTGGAGCCTGTATAGAAGtggataatttaattgaaacagCTCAGAAACATGGAGAGTACATCACAATAAAGTTAGAACCCTTGGACGACCAATACCAGTGTGATTATCTTGATGATGAAATCACATCTGAGACTGGATCGAATCACCAACCATATGTCAAAGAAGAACCTTCTGAAGACGAAATAGAACAAGACAATGGTGATGAGGAATATTTTCCGGAAGACGAATACAACCCATCTCAACGTCCTGATAGACACCGCTTTGCTATGCTAAAGCCGTGGCAGCAGCGGTCGTTTGTAGCGGAACTGAGGGAACGGTATGAGGAATTGAGGGAGGATGAAGAGTTACTTGTCAATACGTTGGGTAGAATTATGCGGACAGTAAAGCCTCCACCTCCGCCACAGGATTTCTTTATGATGAATGATACAATGTTTGAGTGTGCATACTGCGGATATCTGTTGGACACAATACCATCAGTTGGTCGACATTACCAGGAAAAACATGGACAGCGATATTTAGTGTGCTATGCATGTGGAGTCGATTTTAGAAGCACTACAAACCTGTATAAGCATGAGAAGCGTTGCATCGCTCCGGATGCGGAGATAGTATTGCGTGCGCGCGCCGTGTTCCTCGGCCGCAAGGGGCGTGGCCGACCCTTCGTCACGCTCAACAAGTTCTCCACTAAACGAAATAAGTTTCCCTGCTCGCTGTGTTCTGCGGTGTTCATAACTAAGAGCAACCTGGAGTCTCATGAGAACTTGCATCGCGGCGAGCGGCCGTTCCGATGCCACGCCTGTCCCTGCGCTTATACGTCATATTCTGCGCTGTCGCGTCACACTAAAAAGCACTCGGATGCCCAGTTTATCTGCGACCACTGCAGCCGCTTGTTCAAAATCAAGGCTGCGTTAGTTGCTCACATGGACACACATAAACCAATGCGTAAATACGGGTGTGACGAGTGCAATCGTCGATTCGCTCAGAAGTCGGCGCTGGTGCTGCACGTCAACAGAGTTCACAGGAACTTACCACCGCCCTGTGCTTGTCAGATATGTCCCAAGAGATATCCCAGGATGTCTCTACTCAAAGCACACATGAAGCGGGCGCATGGCATGTCGATCATCACTCGCAAGATGTTCTTCAAAACCCTGCCAACAATGACAGAGCTAGAAATAAAACAATCCAAAGTCATATTAAAATATGACGAAAATGAAATGCTTGCTTTCCCACCGCCACCGATCAAGACCGAACCAGCCACGAATGAGGAACTTAACTACGACCAAGATTATGCAGAAGGTAGCAATGAAATGGACCAAGTAGAAACTAAACCAACCGAGGAAATATTAATGGATGACTTCATGCAATATGTGACACAAGGCGTTCAAGACACAGGTGCAAATGTAGTTTATATACAAAATGGGGAAGTGGTACATCATAGTACGGATTCTGAATATGTAACAAGTACGGATAATTTTATATTGGAAGTAGAAGCTATAGTTGATGGGCAGATAGTGGTCAAAAGCTTGAGTGATGATAGAAAACCAGGTAATTTTGTTGTTGGAAATAGTCTTTAG
Protein Sequence: MEAEDDMIVLVIVDDDEKANPSEKNFPPSEPSGACIEVDNLIETAQKHGEYITIKLEPLDDQYQCDYLDDEITSETGSNHQPYVKEEPSEDEIEQDNGDEEYFPEDEYNPSQRPDRHRFAMLKPWQQRSFVAELRERYEELREDEELLVNTLGRIMRTVKPPPPPQDFFMMNDTMFECAYCGYLLDTIPSVGRHYQEKHGQRYLVCYACGVDFRSTTNLYKHEKRCIAPDAEIVLRARAVFLGRKGRGRPFVTLNKFSTKRNKFPCSLCSAVFITKSNLESHENLHRGERPFRCHACPCAYTSYSALSRHTKKHSDAQFICDHCSRLFKIKAALVAHMDTHKPMRKYGCDECNRRFAQKSALVLHVNRVHRNLPPPCACQICPKRYPRMSLLKAHMKRAHGMSIITRKMFFKTLPTMTELEIKQSKVILKYDENEMLAFPPPPIKTEPATNEELNYDQDYAEGSNEMDQVETKPTEEILMDDFMQYVTQGVQDTGANVVYIQNGEVVHHSTDSEYVTSTDNFILEVEAIVDGQIVVKSLSDDRKPGNFVVGNSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00301614;
90% Identity: iTF_00039271;
80% Identity: -