Basic Information

Insect: Xanthia togata
Gene Symbol: -
Assembly: GCA_963853775.1
Location: OY970803.1:21885601-21897735[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0019 0.27 13.3 1.4 1 23 261 283 261 283 0.99

2 10 0.0082 1.2 11.4 8.5 1 23 290 313 290 313 0.97

3 10 5.3e-05 0.0075 18.2 1.1 1 23 344 367 344 367 0.98

4 10 0.031 4.4 9.5 0.1 2 23 376 398 375 398 0.94

5 10 0.026 3.6 9.8 0.1 2 20 409 427 409 429 0.94

6 10 0.00029 0.041 15.9 0.6 3 23 439 459 439 459 0.99

7 10 5.5e-05 0.0077 18.2 4.0 1 23 514 536 514 536 0.98

8 10 0.0003 0.042 15.9 0.7 1 23 542 564 542 564 0.98

9 10 2.5e-05 0.0035 19.3 2.4 1 23 570 592 570 592 0.98

10 10 0.0019 0.26 13.4 4.2 1 23 598 621 598 621 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0019	0.27	13.3	1.4	1	23	261	283	261	283	0.99
2	10	0.0082	1.2	11.4	8.5	1	23	290	313	290	313	0.97
3	10	5.3e-05	0.0075	18.2	1.1	1	23	344	367	344	367	0.98
4	10	0.031	4.4	9.5	0.1	2	23	376	398	375	398	0.94
5	10	0.026	3.6	9.8	0.1	2	20	409	427	409	429	0.94
6	10	0.00029	0.041	15.9	0.6	3	23	439	459	439	459	0.99
7	10	5.5e-05	0.0077	18.2	4.0	1	23	514	536	514	536	0.98
8	10	0.0003	0.042	15.9	0.7	1	23	542	564	542	564	0.98
9	10	2.5e-05	0.0035	19.3	2.4	1	23	570	592	570	592	0.98
10	10	0.0019	0.26	13.4	4.2	1	23	598	621	598	621	0.96

Sequence Information

Coding Sequence: ATGGATGATCTAAAATATTGTCGAGTATGTCTTGTGACTGATGTGAAGATGTTTAGCTTGGAAACTACGTCGAGCGATTCCATCGGTGTTGTTTACTCACATTTGGCGCAGATTCCGATATTCGATATGGATCAACATGTGTGTTTCGAGTGTGCCAATCTCCTCCATAAGTATCAAGAGTTCAAGACAAAATCTCTCAGAGCTCACAACATTATATCTAAAATCAAACTTGGTTCTTCACAGATAACAAGGCAAACCCTCAAAAATGTAGATagagaaataaacaaattggaATCCACCTTGATATTAACTCCAGTAACTATCTTTTATGAAGGACCTACAAGGATCACAGAAAGAGAAATAAATGTTCAagacaaagaaaataaacaatttgaaattaatgttaaaatagAAGCAGACATAGAAATAGAAAAGGAATATGATTACAATGAATCATATAATGAAgattacattgattttacagAAGAGTCAGTCCCAGAAAAGGTTACACAACCAAAACATAAAAGTAAACCAAACAAGGaatcaaaaagtaaaaaaagaaaagttagAACTGTTGTTAAGAGCGAGGATGACTTCAGTGATGATGAACCTTTGTCAAAAAGTGCTATGAAGACAGCAAAAACAGAGCctgttaaaaaaaagaatggTCTCAACATTGGTTACTTTGATGATTATGCAACTGTTGTGTTTCTGACCCCTGAAGATGCCAGAAAAGAGGTGCTTTTGAGAAAAGAGTCCAGTAACTATAAAAAGTCACCATTCAAATGTGATTTATGCTATAGAGGATTTGAAGCAAAATCAGCATTTGAGAATCATACAAAGAAACATAGCATTGAGAACGGCAACTATGAATGTGATCTCTGCCATCTCAGGTTCCCTCAACAAGTACACTTGTGTAAACATAGACTTTCATGTCATAAGAGAAAGTTTAGCTGTAAATTATGCTCATACATTTGTTATTGCACTTACCAAGCAAAAACCCATGTTAGTCTAcacaaaggaaaaaaatatccaTGTAAACACTGTGGAGAAATATTCAGCATGCCAAACAGCTTACTAATGCATAAACGTATGAAGCATTTGAAGGAGTCTGTACGGGAAAGTGTTTGTGAGCTTTGTGGAAGTACCTTCGGCACGCCCAGGGGACTGTTCTTACATAACATGAAAGTGCACAGGCAGgATAAAAACGACAAGCTTGGCCCCGAGTGTGAAGACTGCGGGGTGCACTTCACATCAGAACTGGCCTGGAAGCGACACCTTGTGCTTTCTAATAAACATAAAGTCAGTAACGGTTGCAAATTCTGCGGAGACACATTCTCGAACGAGGACGATCTTAAGGTTCACTTGAGATTGCACTCTCGGAAGCCACTCAACAGATGCAAAAATATGAAACTACCCGCCGCCTGTGCTATTTGCGCTAAATGGCTAGTTAATCGCGTGGAATACAAGACACACGTGACTTCAGAGCACCCTCACAGCGACGAGGCGAAGAAGTTCCACGCAGACGACCAGACGCCCTTCGTGTGCGAAGTTTGTGGACAGATGTTTAAGcaacaatGCTTCCTAACTTACCACCAACGGAAACACACCGGCGAGCGTCCCTACAAGTGTCACGAATGTGAGAAAACGTTCCAACTGGCCGGAGCGCTGTCTATACATCGCAGTATACACAATCGGAAGAGGCCACATAAGTGTTTGTTGTGCGCCCGTGTGTTTACATTTAAGAGTGCCCTTAACAAACATATGAagGTCCACCTCGGCATCCGTCCCCACAAATGCGCGATCTGCGACAAAGGCTTCATACACATGTGCGACTTAAAACTGCACATCAAATACGTGCACGACAAGATACCGTGGCCTAAGAAGAAGAACAAGAGAACTATTGTTGATGATGCTCCGTATTTAGAATACCACTGA
Protein Sequence: MDDLKYCRVCLVTDVKMFSLETTSSDSIGVVYSHLAQIPIFDMDQHVCFECANLLHKYQEFKTKSLRAHNIISKIKLGSSQITRQTLKNVDREINKLESTLILTPVTIFYEGPTRITEREINVQDKENKQFEINVKIEADIEIEKEYDYNESYNEDYIDFTEESVPEKVTQPKHKSKPNKESKSKKRKVRTVVKSEDDFSDDEPLSKSAMKTAKTEPVKKKNGLNIGYFDDYATVVFLTPEDARKEVLLRKESSNYKKSPFKCDLCYRGFEAKSAFENHTKKHSIENGNYECDLCHLRFPQQVHLCKHRLSCHKRKFSCKLCSYICYCTYQAKTHVSLHKGKKYPCKHCGEIFSMPNSLLMHKRMKHLKESVRESVCELCGSTFGTPRGLFLHNMKVHRQDKNDKLGPECEDCGVHFTSELAWKRHLVLSNKHKVSNGCKFCGDTFSNEDDLKVHLRLHSRKPLNRCKNMKLPAACAICAKWLVNRVEYKTHVTSEHPHSDEAKKFHADDQTPFVCEVCGQMFKQQCFLTYHQRKHTGERPYKCHECEKTFQLAGALSIHRSIHNRKRPHKCLLCARVFTFKSALNKHMKVHLGIRPHKCAICDKGFIHMCDLKLHIKYVHDKIPWPKKKNKRTIVDDAPYLEYH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01027699;
90% Identity: iTF_00238121;
80% Identity: -