Basic Information

Gene Symbol
-
Assembly
GCA_963853775.1
Location
OY970798.1:1773454-1784529[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 37 1.5 1.5e+03 0.9 0.1 22 42 418 438 414 439 0.86
2 37 1.5 1.5e+03 0.9 0.0 22 42 444 464 441 465 0.86
3 37 1.5 1.5e+03 0.9 0.0 22 42 470 490 467 491 0.86
4 37 1.5 1.5e+03 0.9 0.0 22 42 496 516 493 517 0.86
5 37 1.5 1.5e+03 0.9 0.0 22 42 522 542 519 543 0.86
6 37 1.5 1.5e+03 0.9 0.0 22 42 548 568 545 569 0.86
7 37 1.5 1.5e+03 0.9 0.0 22 42 574 594 571 595 0.86
8 37 1.5 1.5e+03 0.9 0.0 22 42 600 620 597 621 0.86
9 37 1.5 1.5e+03 0.9 0.0 22 42 626 646 623 647 0.86
10 37 1.5 1.5e+03 0.9 0.0 22 42 652 672 649 673 0.86
11 37 1.5 1.5e+03 0.9 0.0 22 42 678 698 675 699 0.86
12 37 1.5 1.5e+03 0.9 0.0 22 42 704 724 701 725 0.86
13 37 1.5 1.5e+03 0.9 0.0 22 42 730 750 727 751 0.86
14 37 1.5 1.5e+03 0.9 0.0 22 42 756 776 753 777 0.86
15 37 1.5 1.5e+03 0.9 0.0 22 42 782 802 779 803 0.86
16 37 1.5 1.5e+03 0.9 0.0 22 42 808 828 805 829 0.86
17 37 1.5 1.5e+03 0.9 0.0 22 42 834 854 831 855 0.86
18 37 1.5 1.5e+03 0.9 0.0 22 42 860 880 857 881 0.86
19 37 1.5 1.5e+03 0.9 0.0 22 42 886 906 883 907 0.86
20 37 1.5 1.5e+03 0.9 0.0 22 42 912 932 909 933 0.86
21 37 1.5 1.5e+03 0.9 0.0 22 42 938 958 935 959 0.86
22 37 1.5 1.5e+03 0.9 0.0 22 42 964 984 961 985 0.86
23 37 1.5 1.5e+03 0.9 0.0 22 42 990 1010 987 1011 0.86
24 37 1.5 1.5e+03 0.9 0.0 22 42 1016 1036 1013 1037 0.86
25 37 1.5 1.5e+03 0.9 0.0 22 42 1042 1062 1039 1063 0.86
26 37 1.5 1.5e+03 0.9 0.0 22 42 1068 1088 1065 1089 0.86
27 37 1.5 1.5e+03 0.9 0.0 22 42 1094 1114 1091 1115 0.86
28 37 1.5 1.5e+03 0.9 0.0 22 42 1120 1140 1117 1141 0.86
29 37 1.5 1.5e+03 0.9 0.0 22 42 1146 1166 1143 1167 0.86
30 37 1.5 1.5e+03 0.9 0.0 22 42 1172 1192 1169 1193 0.86
31 37 1.5 1.5e+03 0.9 0.0 22 42 1198 1218 1195 1219 0.86
32 37 1.5 1.5e+03 0.9 0.0 22 42 1224 1244 1221 1245 0.86
33 37 1.5 1.5e+03 0.9 0.0 22 42 1250 1270 1247 1271 0.86
34 37 1.5 1.5e+03 0.9 0.0 22 42 1276 1296 1273 1297 0.86
35 37 1.5 1.5e+03 0.9 0.0 22 42 1302 1322 1299 1323 0.86
36 37 1.5 1.5e+03 0.9 0.0 22 42 1328 1348 1325 1349 0.86
37 37 1.6 1.6e+03 0.8 0.1 22 42 1354 1374 1351 1374 0.86

Sequence Information

Coding Sequence
atgtatttattattatacttccAGTACTCGAGTCTGCGCAAGTCCGTAGACTGCTGCAAACCTGTTCAAACGGTTGACGTATGTCTCGTCACCGACAAACCGATGGAAGATCAGACAGATATAGTAAACACGCTGGAGAACAACTTATTTGTTATAGAGGACCTCTACAGGGAGTGTTTTTATGAGACGGCAAAACAAGAGAATCTGATAGAAATGCTGCGCAGTTCGTATCTGGACGTGCGACTGATGGACAGACAGAAGGCAGACCAGATCGGACGCCTGCAGACTGTCATCAACACGCAACAATGGTCGCTGGACAGGTGTCAGGACATATCACTGGAAGTGGACGGCTTGAAGATGGAAATATCTAACTTTCTGAACAGCTCCAGTTCAACAAACAACGACTCGGGTATGTGGGAGCGCAGTGAGGAGTCGTATGCGCCTGCGCCGGGCGTGCAAGACGATCTGCACGACGTCAGGGAACAGCTGTTGAGGCTGCAGGACTTGCTAGCTCTCGATTCTTGTACATGTGGTTTAATGgaagaaaatatgaaattgaagAAGAGAGCTGAGAGCCAAGAAATAAAAGTAGGCGAGTTACAAGAGAAGATATGTGAGTTAGAAGCCAGCAAGTGGGAGACCGACTCGAAGTGCAAGGTAGAGATCGAGTCGAGAGGGCAAGAAtTGGCGCACATAAGAGAGCAGCTGTTACGTGCACAGAACTGCTCCAGGGAGCAGAGCTCCACCGTCGAATCGATGTCAATACAGCTGGGACAGACAAAGGCGTTATTGTGCGAGAAGACGGCAGAGGTGTCGGAACTGCGCCAAGAAATTGAAACGCAGGCGGAAAAGATCAATGGACTTCAGGAGGATCTGGCGAAAGCAGACCACATCATTGAAGAGAACTGCAAGATGCGCAGCGAGGTGGCGTACCTGACGACGCAGGAGCAGCTGTGGCGCGCGCAGCTCGACGACAGCAAGCGCCGCGCGCGCGCGCTCGGGGCCGAGCTCGCGCGCTCGCGGGCGCACGCGGCGCACGTCGACACGTGCTACAGGGAAAAGGCGAGCAACGTGGCGGAGCTGCAGGCGTACCTGGAGCAGGCGcacgcgcgcggcgcggcgctgtGCGGCGAGGCGCGGCGCGCTGTGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGTTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACCTGGAGCGGGCGCCGTGCGCGTGTGGATGCGGCGCATGCGCGACAAGCACAGGTAACGTGGCGGGGCTGCAGGCGCACAGAGAAAGAGATAACTTACTCAAAGAGAAAGATTCTCTCATAGCGGTCCTACGTCGACGTCTAGAAGAAAGACAGAACGATTCGCAAAGCACGAGTGCGAGCGAGAACACAGCATCTTGCTCCAAGTGTAAATCGAGCAGAGAGAAGCGGAGCTACTGTTCCAAGAGTGGAATAAGACGGGGACAGTGCCTTGCGCCGAGTGTGAGCGAGATGCCAAGCTGTTCGTCGACTCCCGCGCCGATGCCTATGCGGTTAAGGAAGAAACAGAGTGGTAATAATGTGAGTAAATGCTGTACGTTGTTTATATCGATCGCTCAGCGATCTAATTAA
Protein Sequence
MYLLLYFQYSSLRKSVDCCKPVQTVDVCLVTDKPMEDQTDIVNTLENNLFVIEDLYRECFYETAKQENLIEMLRSSYLDVRLMDRQKADQIGRLQTVINTQQWSLDRCQDISLEVDGLKMEISNFLNSSSSTNNDSGMWERSEESYAPAPGVQDDLHDVREQLLRLQDLLALDSCTCGLMEENMKLKKRAESQEIKVGELQEKICELEASKWETDSKCKVEIESRGQELAHIREQLLRAQNCSREQSSTVESMSIQLGQTKALLCEKTAEVSELRQEIETQAEKINGLQEDLAKADHIIEENCKMRSEVAYLTTQEQLWRAQLDDSKRRARALGAELARSRAHAAHVDTCYREKASNVAELQAYLEQAHARGAALCGEARRAVGAVRVWMRRMRDKHSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHLERAPCACGCGACATSTGNVAGLQAHRERDNLLKEKDSLIAVLRRRLEERQNDSQSTSASENTASCSKCKSSREKRSYCSKSGIRRGQCLAPSVSEMPSCSSTPAPMPMRLRKKQSGNNVSKCCTLFISIAQRSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-