Basic Information

Insect: Xanthia togata
Gene Symbol: clz9_43
Assembly: GCA_963853775.1
Location: OY970792.1:11970000-11972297[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.1e-07 0.00012 23.4 0.0 1 35 8 41 8 48 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.1e-07	0.00012	23.4	0.0	1	35	8	41	8	48	0.90

Sequence Information

Coding Sequence: atggcGCCTAAAAAAGACTATACGCCTCAACAAATGGGCTTGGCTATCGAAGCTGTTAGAAAAGGCGTAAAAATATCTGATGCAGCTAAAAAATTTAATGTGCCGAGAATAACTTTGCACAATAAAATCACCGGAAAAAGTCCCATAGAGTGCTCAATGGGACCCAGTACCGTTTTATCGAAGGAAGAAGAGGATATTCTAGAAGTCTGGATTAAAGATATGGCAGATAAACATATCCCAATAACGAAAGACGAATTATTAGACAGTGTCCAACGTATAATCTTTGACAAAAACCGAGTGACTCCTTTCACAAATAACAGACCAGGCAAAAAATGGTATTCCTCATTTATGAAACGACATCCTACGATTGCTGAACGTACTGCTCAAAATTTATGCACAGCAAGAGATAATGTTACTCAAGACGACATTGAGAAGTGGTTTTCGGAAGTCGAAGGTGATTTGAAAGATAGAGGACTGACTGAAATACTGAAAAATCCTAAAAGGATTTTCAATACAGACGAGagtgcgttttttttaaatccgaaACCAGGGCGTGTCCTTGCTACAAAGggagaaaaaaatgtatatgcTTCTTCAGGCGACGATAAGGAAAATTTAACAGTTTTGGTTACCGGAAATGCCGCAGGAGATCTGGCACCTACTCtggtagtttttaattatgcaaGGATACCGTCATCAATTTCAGAAACTTTCCCCAATGAGTGGGCTATTGGTCGCTCAGAAAGCGGATGGATGTGCGCAGGGACATTTTATGAATATATGACAAACGTTTTTAATCCTTGGCtgataaacaacaatattgaaAAGccagtgttattttttttggatggacacaAGTCACATTTAACTTTGCACCTGTCAAATTTCTGCTCTGAAAATGGCATCGAAGTTATAGCTCTTAATCCAAATTCTACACACATCTTACAACCAATGGATTTGGCTGTCTTCAGGCCTTTGAAGTCGTCATGGCGAGAAGCGGTTAAGACCTGGAAGATGCAAAATTTGGGACAAGTCctcaaaaaacataattttgctCCAGTTTTGAAGCTAGCGATCGAAAAAATTACTGCTGAGACAGTCAAAAATGGATTTCGAGCGGGGGGACTGTACCCATTTGGTCCAGAATACGTAGATATGAGTAAAATCAAATctcaaaacaaaaagaaaattgaGTCCATGTGCCAAAGcgaatttttgaaaatgttgGAAACCAGAATAGAATCAACTTTGTCAAATgacaaattaaagctgtttaAAGATCTTTATTACAAAAGTCGCCTCGAGTTAGACAACCTTTTGCCTAATGAAAACATATCTTTATATTTGATTTGGGCTAGTAGTAAGCAAACTGATCATGACGTAGGAAATGATGTATCAGTAGCAGTACCCACTATCGCCGTTGAAAAGTCAAATCCCATAACagaaaatattaatcaaaatGCCAACCATTCTCCTAACGAAAACGAAAGTACTGCTATTTCGTCTCATAATACAAATGATTCCGAACCAAGCACTTCAGGTCTCAATACTTCAAATGAGCCAAATGTCGGCCAGGGAGATTTACCAGACAACGCTTATTCTTTATCAAAATGTAGCGACAAAACACCTATTAAGAGTTTTAATCCTGGCACTTCAAAATATGTGATACCATCGCCTTTTAAACGAAACTTATTTTGGCCAGAAGAAGatgaaacaacaaaaaacaagaAACGCAAATTAAAAGAGAAAATTCCATTTACGATTACAAGCCCTGCATGGAAGGCTTACAATACCAAAAAAGAAGAACTGAAAAGGAAACAAATAGAAGAAAAGGAATTGCGAGCTAAAAAACGAGAAGAAAAAAGGCTGGAAAAACTTAATAAGAAGAAAAAAGtgccaaaaaaacaaacaaacaggtCTGAATCGTCTGAAAGTGAGACTGAAATAATTTACGCCGAAAGTGATGACAGTGTCTTGTCTGAAGGATCGGACGACGGCGACGCATCAATGAGTACGTTGGTCTCTTCACAACAAAAACACACGAAAGGAAGTTATGTGATAGTTTTATATGAAGGGCAACATTTTCCTGGAGTTATCGAAAGTACAAATAAAAACGAGTTTGAAGTTAGCACGATGACATTTTCAACAGGTAACACCTACAAATGGCCAGAGAAACCTGACAAAATGTGGTACCAAGGAAAAGATGTCGTGGAGCATATCAGTCCTCCAATCTTGATAAACAAAAGAGGATTTTACTCTgtaaaagaaatggaaaaatACTCAGTTTTTACTTCTTAA
Protein Sequence: MAPKKDYTPQQMGLAIEAVRKGVKISDAAKKFNVPRITLHNKITGKSPIECSMGPSTVLSKEEEDILEVWIKDMADKHIPITKDELLDSVQRIIFDKNRVTPFTNNRPGKKWYSSFMKRHPTIAERTAQNLCTARDNVTQDDIEKWFSEVEGDLKDRGLTEILKNPKRIFNTDESAFFLNPKPGRVLATKGEKNVYASSGDDKENLTVLVTGNAAGDLAPTLVVFNYARIPSSISETFPNEWAIGRSESGWMCAGTFYEYMTNVFNPWLINNNIEKPVLFFLDGHKSHLTLHLSNFCSENGIEVIALNPNSTHILQPMDLAVFRPLKSSWREAVKTWKMQNLGQVLKKHNFAPVLKLAIEKITAETVKNGFRAGGLYPFGPEYVDMSKIKSQNKKKIESMCQSEFLKMLETRIESTLSNDKLKLFKDLYYKSRLELDNLLPNENISLYLIWASSKQTDHDVGNDVSVAVPTIAVEKSNPITENINQNANHSPNENESTAISSHNTNDSEPSTSGLNTSNEPNVGQGDLPDNAYSLSKCSDKTPIKSFNPGTSKYVIPSPFKRNLFWPEEDETTKNKKRKLKEKIPFTITSPAWKAYNTKKEELKRKQIEEKELRAKKREEKRLEKLNKKKKVPKKQTNRSESSESETEIIYAESDDSVLSEGSDDGDASMSTLVSSQQKHTKGSYVIVLYEGQHFPGVIESTNKNEFEVSTMTFSTGNTYKWPEKPDKMWYQGKDVVEHISPPILINKRGFYSVKEMEKYSVFTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00726305;
90% Identity: iTF_01527116; iTF_01439875; iTF_01439874; iTF_01192647; iTF_01440979; iTF_01440980; iTF_01440981; iTF_00036609; iTF_00038689; iTF_00038708; iTF_00038682; iTF_00038683; iTF_00038684; iTF_00038685; iTF_00038686; iTF_00038687; iTF_00038688; iTF_00745625; iTF_00745627; iTF_00745628;
80% Identity: -