Xtog049541.1
Basic Information
- Insect
- Xanthia togata
- Gene Symbol
- -
- Assembly
- GCA_963853775.1
- Location
- OY970818.1:3642405-3643099[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-06 0.0005 21.3 0.0 1 38 18 55 18 63 0.85 2 2 3.9 1.1e+03 1.0 0.0 14 23 97 105 85 107 0.79
Sequence Information
- Coding Sequence
- atGCCTCGCAAATATGTAAGAAAGGTTGGAGTTCGTCCACGAGCTGAATGGACGCAAGAGGCGTTAATAGCTGCAATGGATGAAATTTCGAGAGGCATCGTTGGAATCAATGAAATATCTCGTAAATATGGGATTCCATCGAGGATATTAAGAAGAAGATTcgcaaataaaaatgttgaaaaacAGACATTAGgaaagCACCCGCTTCTTGGTTTTGCCAACGAAAAACGTTTGGTGagccacataaaaaaaattagaaaaatctGGTTTCCCTCCAACCCGGGACATGAAGGCTTATCAGTTGCAAAAGCACAGGGATTAAATCGAGATgaagttaataaaatgtttgaaCTACTGCTTAAAGTGATGACAGAGCATGGTTTACTGGATAAACCGGATAGGATTTACAATATAGATGAGACAGGTGTCCAGTTAAATAACTCTACGGGAAAAGTTATCGCTACAAGAGGCTGA
- Protein Sequence
- MPRKYVRKVGVRPRAEWTQEALIAAMDEISRGIVGINEISRKYGIPSRILRRRFANKNVEKQTLGKHPLLGFANEKRLVSHIKKIRKIWFPSNPGHEGLSVAKAQGLNRDEVNKMFELLLKVMTEHGLLDKPDRIYNIDETGVQLNNSTGKVIATRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01527115;
- 90% Identity
- iTF_01527115;
- 80% Identity
- iTF_01527115;