Xtog023996.1
Basic Information
- Insect
- Xanthia togata
- Gene Symbol
- -
- Assembly
- GCA_963853775.1
- Location
- OY970799.1:16415965-16416456[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-08 4.4e-06 27.9 0.0 3 40 15 53 13 57 0.90
Sequence Information
- Coding Sequence
- atgAGTACCAATGAGAGAAAAAAGCGAAAGAAATGGGATTCTGATAAGATGCTGAAGGCGTACAATgcagtaaaaaataaagaaatgggCTACTTAAAGGCCTCTCAATTTTTTAAAGTCCCAAAGTCAACTTTGGAGCGTTATTGTAAAAGTGTCAATCCTATAACAGAGCTAACCTCTCTGAAAATGGGCCGAAAACCAACTTTTTCAGAAGAAATGGAACGTGAGCTTGCAGAGTACTGCATTACAATGGTGTCAAGATTCTACGGACTGAGAGCCTCTGACATCCGCTCTTTGGCGTTCCAACTGGCGATAAAGAATGGACTGCCACACCAATTTAATAGAAGCAAGAATACTGCAGGCCGAAAGTGGATGAGAAACTTTCTAAAAAGAAATCCTCGATTGTCTTTTAGGACACCTCAAGCTACATCTGCTAATAGAGCCAAGGGGTTTTCAAAAGAGAAGGTAGACGAATTTAATGACATTTTTTAG
- Protein Sequence
- MSTNERKKRKKWDSDKMLKAYNAVKNKEMGYLKASQFFKVPKSTLERYCKSVNPITELTSLKMGRKPTFSEEMERELAEYCITMVSRFYGLRASDIRSLAFQLAIKNGLPHQFNRSKNTAGRKWMRNFLKRNPRLSFRTPQATSANRAKGFSKEKVDEFNDIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01527043; iTF_01439847; iTF_00172761; iTF_00411377;
- 90% Identity
- iTF_01527043; iTF_01439847; iTF_00172761;
- 80% Identity
- -