Xtog046305.2
Basic Information
- Insect
- Xanthia togata
- Gene Symbol
- clz9
- Assembly
- GCA_963853775.1
- Location
- OY970815.1:3882944-3884596[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-12 2.1e-09 38.5 0.0 2 39 15 52 14 57 0.94
Sequence Information
- Coding Sequence
- atggtacgaaattataaaagaaaaactaccgATAAATACTCTCGAGAAACTCTGCTGGCAGCTGTTAATGCAGTAAGGGAGGGACAGATGACGGCTTTGAAGGCATCTACAGTTTATGGTGTACCTAGACCAACAATAATCTCACACTTAAATGGTGATCGGGGTATGAAATCGAAAACTCATGGAAGACCGACAGTATTTACGACTGAATGTGAGAAAGATATGGCGTCAATGTTACACAGTATGGAACGGCACGGTTTTGGTTTAACTCGGCGAGAAGTCAGAGCTCTTGTTGGACAATACGTTCGTAGAAATAACATTGACACTCCCTTTAAAGACGGAATTCCAGGGGAAGAATGGATACGAGGCTTCAAAAAGAgaaataaattaagtttaaaaaaaccacAATCGGTAGAAATAGCGAGAAAGAAGGCAGCCGATCCTTTTCTTGTAAACGAATTTTATGATCTACTAGAAGAAATTGTGCAGGAGCAAAAATTAGAAGGTGATCAGATTTGGAATCTTGATGAAACAAGTTTTTGCCAAGATCCAGGCAAGTCGAAAATTATTGGATTAAAAGGCTTCCAAGCCACAAGAACTACCAGTTCACCTGGTCGCGATAACACAACAGTGTTATTCGCATGCAACAGTTGGGGTCAAAAAATTATTcctttaataattttcaaaggAACATATCTTTGGAACTCATGGCTACCTGACGATGATTCGATTGATTCAGCATTTGCATCGACCTCGAAAGGTTGGATGGAGGCTTCCGTCTTCGAAAGCTTTTTTTCTAACGTATTAATACCTGAAATATGCAAAACAGGTAAACCACAGCTTGTGATATACGACGGCCATTCAACGCATCTGGacttgaatgttattttaaaggcaaaagagaacaagatcaccattCTAAAATTGCCGCCTCATTCTTCTCACATTTTACAGCCGTTAGATGTGAGCACTATGAAAGCGATGAAGGATCGATGGGatcaaaagttaattaaatgGCAACGGCTTAATATCGGTAAAAAGTtaccaaaaaaagaatttaccCAAATATTGGTAGAAACTTGGAATGACCTGGAACCATTGATATTGATGAACGGATTCCGAAAAACCGGTATATATCCTTTGGATAGGAACCAAATCGGAGAAGACAAATTTGATCTTGCATCACTACAGCGTTGGAAAAATCATTTAGCAAATAAAACtacagaagaagaagaaataatcACGGAAACTCAACATATTCAAAAACAGAATATTGAAACTGATGAAACAACACAAATAATTCATCAACTTGAACAAGAATTTGAAGGAGAAACTGTACAGGAAGCTCAGAAGGAACAACAACAATATGATGAAACCACCGAAACACGCAAAATGTTCGGTTGTGTACATAGAGGTCCAGCTAAAAATGTTGGCAAATTTAAACTTATCCCTAGGAAACAAAGCAATTCTAACGCTTTAACAATCATAAGCCAAAATAAAGTTATCATGGAACAGTCAGaggaaaagaataataatatcaatgtaACTTTTGGGAGCTTATTACTTGAATCTATATCAAGAGGAAAAGAAGAAACGAAGCAAAAAAGAAAACGCTTAGGAATAGGcgctataaataataatcacaaCAAATGA
- Protein Sequence
- MVRNYKRKTTDKYSRETLLAAVNAVREGQMTALKASTVYGVPRPTIISHLNGDRGMKSKTHGRPTVFTTECEKDMASMLHSMERHGFGLTRREVRALVGQYVRRNNIDTPFKDGIPGEEWIRGFKKRNKLSLKKPQSVEIARKKAADPFLVNEFYDLLEEIVQEQKLEGDQIWNLDETSFCQDPGKSKIIGLKGFQATRTTSSPGRDNTTVLFACNSWGQKIIPLIIFKGTYLWNSWLPDDDSIDSAFASTSKGWMEASVFESFFSNVLIPEICKTGKPQLVIYDGHSTHLDLNVILKAKENKITILKLPPHSSHILQPLDVSTMKAMKDRWDQKLIKWQRLNIGKKLPKKEFTQILVETWNDLEPLILMNGFRKTGIYPLDRNQIGEDKFDLASLQRWKNHLANKTTEEEEIITETQHIQKQNIETDETTQIIHQLEQEFEGETVQEAQKEQQQYDETTETRKMFGCVHRGPAKNVGKFKLIPRKQSNSNALTIISQNKVIMEQSEEKNNNINVTFGSLLLESISRGKEETKQKRKRLGIGAINNNHNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00700957;
- 90% Identity
- iTF_01439827;
- 80% Identity
- -