Basic Information

Gene Symbol
ZFY
Assembly
GCA_949128155.2
Location
OX421957.2:7072001-7106636[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.33 35 6.3 0.4 1 23 348 371 348 371 0.91
2 11 0.016 1.7 10.4 0.1 1 23 378 400 378 400 0.98
3 11 2 2.1e+02 3.8 0.9 1 10 404 413 404 427 0.77
4 11 0.26 28 6.6 2.1 1 23 434 456 434 456 0.82
5 11 1.2e-05 0.0013 20.3 1.1 2 23 461 483 460 483 0.93
6 11 1.8e-05 0.0019 19.7 1.0 1 23 489 511 489 511 0.97
7 11 0.023 2.5 9.9 1.4 2 21 523 542 523 547 0.93
8 11 1.8e-05 0.002 19.7 0.6 1 23 555 578 555 578 0.94
9 11 0.0081 0.86 11.3 0.2 1 23 583 606 583 606 0.97
10 11 2.1e-06 0.00023 22.6 3.1 2 23 614 635 613 635 0.97
11 11 2.9e-06 0.00031 22.2 1.3 1 23 641 664 641 664 0.95

Sequence Information

Coding Sequence
atgaatatcaaAGAAGAAGATGTTGCTTATAAGCTGCTCTGCAATGCCTGCCTTTGTGTCGGGCGAAAGCTCCACAACATTACAGAtgagaaaacacaaaaatattaccTAAACGCTTTGAACGAAATTCCTCTATGCAGTTCGACTGCTGTAAGCCTGCAGGTCTGTTGGGAGTGTAAAGCCTTGCTAGAGAAGAGCATATCCTTTAGAGAACAAGTCCAGGACTCTTACCGGATACTGCAAACTTATACTCAAGAGAATCTCCACGAATGCCTCCTGACAGACGTGAGCCGACCACCTCGCCTGAAGGTCCACTGTTCTGAACCCACCAGTATATCTTCCTCAGGGTACGAGACATTTTGCACATACCCAGAAGTCCCCGTTATTTGTATTAAGAATGAGCTTAAAGAGGATTGGGATTGTGACAATGatGACACAAATATCTTAGATGACACTGGCCCTCTATCGGACAGCTCGGAAAACACGAAACATTTCGAGTCAGAGCTACAAAGTATAATGTGCTCTATGAACCGAGATgaaaagagacagagagagagtaAGACCAAAGTAAAAAGAGCTAAGAAGATTAAGAGAGTCAAAGAGGATGAAAAAGTTAAGAAAATGGATGAAAGAAACAAGTCCACCGATGAATGGACACGAAAAAGGGAGCTGGCTAACGCGCGCATGCGTAGATATCGTAAAAAAAAGCGTAAACAACTATTGGATTCTAAACTCCTGAATGACCCTGTGACGGAagaaatgagaaaaaaacaaattcaagaagaaaaaatccGACAACGGAGAGAATGTGGCAAGGAACGTTCAAGAAGATATCGGGAGAAGAAACGTATCAATGCTCTGACAGCTGTTGACCCTTTGGCTCACGACTCACAAGTACCCGGACCTTCGCACGCTAATTCACCATTTCCTAAACCTACAAAGGAGCGAGACCAAAAGATCCTAACCATAGAGCTGACATACGAAGAGATGCTGTTAGAAAGAGATAAAGAATCAACCAAAGACTCGTACTTAAAGGCGGagtataaatgtgaaagttgtCTCATTGGGTTCAACTATAGGAAGTCATATTCAGCTCATGTGGCGGCCAAGCATTCAGCTgaACTAGGTGACTACATCTGTCCTATTTGCAAAACGATAATACCTTCAGTGGAGTCATTTACAGCGCATTATAAGAGGCATATGAGAAGATATGAATGTAGTATTTGTCACAAAAGAACATTGGATGTAAAAGTGATGCAACAGCATTATTACTCAACCCATGAGATATCATTGAAGGAATATAAATGTAATATATGTGGAAAGATATCTAACTCCATAGACACCCACCGCTACCATAAAGACACACACAAAGCAAGAGTACAGTGCACAGAGTGTGATAAAACATTCAGGCATAGAGCGGGGCTCAAGAACCATAGACTggCAGTGCATGAATATCGCAACACGTTCCCTTGCACCATATGTGATAAAGTGTTCCGATGGAAAACTAGTCTAAAGCGCCATTTGGAGAAACATGAAGCTAAGGGCAAGTCATCATCAGCGGCAGCATACTGTTCCATGTGTAAAGTCAGCTTTTCGTCCATATTTTCCTACCAAAGACACTTGAAGAATAGTCTCAAACATGTGTCGCAGGATCAGCTCAAATTTATCTGTGATGATTGTAACAAGCGTTTCGCCGATAAGACAAAGCTAAGAGATCACATAGAAGAAAAGCATTTACACAAGACTTACCAATGTCAAATCTGTCTTAAGCCCTCTAAAAATCGTGTTGGTCTGGACCAGCACGTACGCAATGTGCACAAAGGAAGACCGAATGATAAGATGTGCCATCACTGCGGCAAAGGATTTCCTaCTAAAGTACAGTTAGAATCTCACATCCGTTCGCACACCGGTGAAAGACCATTTATATGCGAATACTGCCCGACCACATTCTCCCAGCAATCCAActtatataaacataacagacagGTACATCTGAACATCAAATCCAAACGCTATCCTATGTGTAAGAAGAAAGAACAGAAACTTCCAGACGTGCCCATATTAGACCACGTTCAACCCATTGACCCTTATAGGCCGGTGCCCATGTTACACTATACTGctgaaaaagtatttggaatgtaa
Protein Sequence
MNIKEEDVAYKLLCNACLCVGRKLHNITDEKTQKYYLNALNEIPLCSSTAVSLQVCWECKALLEKSISFREQVQDSYRILQTYTQENLHECLLTDVSRPPRLKVHCSEPTSISSSGYETFCTYPEVPVICIKNELKEDWDCDNDDTNILDDTGPLSDSSENTKHFESELQSIMCSMNRDEKRQRESKTKVKRAKKIKRVKEDEKVKKMDERNKSTDEWTRKRELANARMRRYRKKKRKQLLDSKLLNDPVTEEMRKKQIQEEKIRQRRECGKERSRRYREKKRINALTAVDPLAHDSQVPGPSHANSPFPKPTKERDQKILTIELTYEEMLLERDKESTKDSYLKAEYKCESCLIGFNYRKSYSAHVAAKHSAELGDYICPICKTIIPSVESFTAHYKRHMRRYECSICHKRTLDVKVMQQHYYSTHEISLKEYKCNICGKISNSIDTHRYHKDTHKARVQCTECDKTFRHRAGLKNHRLAVHEYRNTFPCTICDKVFRWKTSLKRHLEKHEAKGKSSSAAAYCSMCKVSFSSIFSYQRHLKNSLKHVSQDQLKFICDDCNKRFADKTKLRDHIEEKHLHKTYQCQICLKPSKNRVGLDQHVRNVHKGRPNDKMCHHCGKGFPTKVQLESHIRSHTGERPFICEYCPTTFSQQSNLYKHNRQVHLNIKSKRYPMCKKKEQKLPDVPILDHVQPIDPYRPVPMLHYTAEKVFGM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00908196;
90% Identity
iTF_00038230;
80% Identity
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