Xict016484.1
Basic Information
- Insect
- Xanthia icteritia
- Gene Symbol
- clz9
- Assembly
- GCA_949128155.2
- Location
- OX421941.2:15411981-15414104[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-08 3.6e-06 27.7 0.0 1 35 8 41 8 48 0.91
Sequence Information
- Coding Sequence
- atggcgcctaaaaaaaattacacgcCCCAACAAATGAGCATGGCTATCGAAGCCGTGCAAAAAGGCTTAAAAATATCAGAAGCagcaaaaaaatttaatgtaccAAGAATAAccttacataataaaattaccgGCAAAAGTCCTATTGAATGCTCAATGGGACCCAGCACCGTTTTGAGTAAACTGGAGGAAGATATTTTAGAGGTGTGGATTAAAGACATGGCAGATAAACATATCCCTATAACAAAAGAAGAGTTACTAGATAGTGTCCAACGTATAATAGTCGACAAAAACCAAGAAACCCCTTTTACTGGCAACAGACCTGGTAAGAAATGGTATTCTTCATTTATGAAACGACATCCTGGAATTGCAGAACGTACAGCTCAAAATTTATGCACAGCGAGAGATAATGTTACTCAAGAGGACATCGAGAAGTGGTTTTCGGAAGTTGAAAGCGATTTGAAAGATAGAGGTCTAATTGACATAGCAAAACATcctgaaagaatttttaatacAGATGAGAgtgcgttttttttaaatccaaaaCCAGGACGTGTCCTCGCTAAAAAAGGAGATAAAAATGTGTATGCATCTTCAGGCGACGataaagaaaatttgacagttctgGTTACTGGAAATGCTGCAGGAGAACTGGCACCTACTCTGGTAGTTTATAACTATGCAAGAATACCGTCGTCAATTTCAGAAAATTTCCCCAATGACTGGGCCATTGGTCGCTCAGAAAGTGGATGGATGTGCGCAGGGACTTTCTATGAATATATGACGAACGTGTTCAATCCTTGgcttactaacaaaaatattgaaaagccaattttgttttttttggacgGACACAGGTCTCATTTGACTTTGCACCTCTCTAACTATTGTTCCGATAATGGCATTGAAGTAATTGCACTCAACCCAAATTCGACACACATACTGCAACCGATGGATTTGGCTGTCTTCAGGCCTTTGAAGTCGTCATGGCGAGAAGCAGTTAAGGCTTGGAAACAGCAAAATTTAGGACAAGTcctcaaaaaacaaaatttcgcTCCAGTCTTAAAGGTGGCTATAGAAAAAAATTCTGCTGAGACAGTGAAAAATGGGTTTCGCGCAGGGGGGCTGTACCCATTCGGCCCGGAATACGTAGATATGAGTAAAATTAAGTCTCAAAACCGGCAAAATGTTGACTCTTCAAACGAAAGAGAATTTTTGAAGAAATTAGagaacaaaattgaaataactttgTCCAAAAACAAGGTGAAGCTTTTCCAAGATCTTTATTACAAAAGTCGCCTTGATCTTGAAAATCTTTTGCCTACTGAAGATTTATCGCTTTATTTGATTTGGGCGaattgtaaacaaaaacaaactgaaGTAGTAAATGAAGAGTCAATATCCACTTCCTCGGCTGAAAAGTCAAATCCTGTTTCAGACACTAATAATCCAAATGCCAACATTTTTCCAAACGAAACCCGAACAGTTCCTGCCTTCTCTCATAATTCGAGTGATTCCGAACCAAACACCTCTTTACAAACCATTTGCTTGCCCATAGAAGAGTCAACATCCACTACCTCGGTTGAAAAGTCAAATCCTGTATCAGAAACTAATAATCCTAATGTCAACGAGTCTCCAAAAGAAATCGGAACAGTTTCTGTCTTGTCTTATAACACGAATAATTCCGAACCAAGCACTTCTTCACAAACCAATTCCTTGTCTATACAAACAGGTCTCAATACTTCAAGCAAGGACAAAACTCCTATTAAGTTTGTTAATCTTGGCACTTCAACTTATGTGATTCCATCTCCTTTCAAACGCAACATATTTTGGCCAGAAATGgatgaaacaacaaaaaataagaaacgcAAATTAAGAGAGAAAATTCCATTTACGATCACAAGCCCTGCATGGAAAGCCTACAATACAAAAAAggaagaagaaaaaaggaaaaaaatagaaGAGAAAGAATTGCGAGCTAAAataagacaagaaaaaaagCTGGAGAAACTTAACACGAAGAAAAAAgcgtcaaaaaaacaaactatatcTGAGTCTTCTGAAAGTGAACCTGAAATAACTTACGCTGAAAGTGATGAAAGTGTCTTGTCTGAAGGATCGTAG
- Protein Sequence
- MAPKKNYTPQQMSMAIEAVQKGLKISEAAKKFNVPRITLHNKITGKSPIECSMGPSTVLSKLEEDILEVWIKDMADKHIPITKEELLDSVQRIIVDKNQETPFTGNRPGKKWYSSFMKRHPGIAERTAQNLCTARDNVTQEDIEKWFSEVESDLKDRGLIDIAKHPERIFNTDESAFFLNPKPGRVLAKKGDKNVYASSGDDKENLTVLVTGNAAGELAPTLVVYNYARIPSSISENFPNDWAIGRSESGWMCAGTFYEYMTNVFNPWLTNKNIEKPILFFLDGHRSHLTLHLSNYCSDNGIEVIALNPNSTHILQPMDLAVFRPLKSSWREAVKAWKQQNLGQVLKKQNFAPVLKVAIEKNSAETVKNGFRAGGLYPFGPEYVDMSKIKSQNRQNVDSSNEREFLKKLENKIEITLSKNKVKLFQDLYYKSRLDLENLLPTEDLSLYLIWANCKQKQTEVVNEESISTSSAEKSNPVSDTNNPNANIFPNETRTVPAFSHNSSDSEPNTSLQTICLPIEESTSTTSVEKSNPVSETNNPNVNESPKEIGTVSVLSYNTNNSEPSTSSQTNSLSIQTGLNTSSKDKTPIKFVNLGTSTYVIPSPFKRNIFWPEMDETTKNKKRKLREKIPFTITSPAWKAYNTKKEEEKRKKIEEKELRAKIRQEKKLEKLNTKKKASKKQTISESSESEPEITYAESDESVLSEGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00726305;
- 90% Identity
- iTF_01525928; iTF_00373996; iTF_00449050; iTF_00449052;
- 80% Identity
- -