Basic Information

Insect: Xanthia icteritia
Gene Symbol: clz9
Assembly: GCA_949128155.2
Location: OY855862.1:8347322-8357561[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.3e-10 1.2e-07 32.5 0.0 1 39 25 63 25 68 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.3e-10	1.2e-07	32.5	0.0	1	39	25	63	25	68	0.92

Sequence Information

Coding Sequence: ATGGTGCGAACATATCAAAGGAAGTATACCAACTCACGCAATGGCAATACACATCCACCATATCTGCAGTATTCTGAAGAAGATTTACAAAAAGCAATAGAAGCCGTtcaaaatggtcatttgaaagTGAAAGAGGCTgccgaaaattacaaaattccGATGAGCACTTTAAGCAGAAAATATAGATATAAAAATTGCACACAAGAGAAAGCGGGGCACCCAACCCTATTTTCTAAGGAAGAAGAGAATTCGTTTGTAGAATATATTCAATTATTGAGCCACTGGGGGTTTCCTTTAGATTCAACTGACCTACGAGTATTTgcacaaaaatacttaaataaaattggaaaaacCATATATGGACTAAAAGATAACATGCCTGGTGTAGACTGGGCGCGCAATTTCCTAAACAGACACAAACGTGTGATTTCCAATCGGACAGCGTCAAACATATCTAGCGATCGCGCCAAAACTACAGAACAGGAGatagatgacttttttgatcGCTACGAAAAATCTATCGAAGGAGTCTCTCCAGACTGTCTCATCAATTATGATGAGACAAACCTAACCGATGACCCgggtaacaaaaaatacatttttaagagAGGATGTAAATACCCTGAAAGGGTTATAAATAGTTCTAATTCATCAATTTCTTTGATGTTTGCTGGCACTGCGGATGGACAATCCTTGCCGATATATGTAGTGTACAAAGCAGATCATCTGTGGGATCAATGGCTGGAGGGAGGACCTGAAGGGACCAGATACAATAGGTCAAAAAGTGGCTGGTTTGATTCCGTATGCTTTGAAGACTGGTTTCATACGGTAATAGTTccgtatgcaaaaaaaaaatcgggacGAAAAGTAGTAATTGGAGATAACTTGTCTTCTCATTTCTCTCAATCTGTTCTACAGACTTGCAATGAACTgaatataacgtttatttgcttAACTCCAAAAACTACACATCTACTCCAGCCATTGGATGTAGCTTTTTACGCTCCTTTAAAAAAGTATTGGCGTGACGTGTTAATAAAGTGGAAGAAGACAGAAGGATTGAAACACAAGACTCTAGTAAAAAGTTCATTTCCaaagttattaaagaaattgAAGAATAAGTTGGTAGAGAATGGCACGGAATCCATTAACCTGATAGCCGGATTTAACAAATCAGGCTTATACCCCATAAATTCAAAGCGACCCAAGTCACGGTTACCACAAAGACAGATCATTTCGGAAGAACAGATAGAGAACACAGCATCTTCGGTTGTAATAGACATTTTGCAAGAAATGAGATGTCCAACAAGTGCCACCGGACAAACAATACGAAAAAGGAAATGCAATGTACCACCTGGAATGAGTATTACAGCCGACGATTTAGAGCGCAATCAGACAGAAAAAACCAAACCCCTCCAGAAACAAAAACGGAAAAGTACACAAAAGCAAGTGTCTGgcaaaaagaagaataaaaaatctttagcTATAACCAATTCATCTGACAAAGACATGAGTAATACCGATTCTGATACCACTGGAGGATTTAAAAATGAAGAATCGAATTTGCTTGATACGCAGCCAATTGCTGGTCCTTCCGGGCTATGTAATGCCTATGCCTTTGACTCCGGCTCCACAGACGTCAGCTCAGATGATCAAAGATCACAATATGAAATGATCATAGAAAATAGTAAGAAACCAGCAACTGGAGAATGTGTATCTATCAAAGGCAAGGGTAAAGGAAAGAGAAGTAaaccaaaaatagaaaaaagccAGATGAAGATAAGTGATTTGAAAAAGAAACTAGCATCTGGTGAAAATCTATCTATTAAAGGCAAGGGCAAGGGAAAGAAAAGTAAACCAAAAATAGAGAAAAGTCAGATGAAGATAAGTGATTTGAAAAACTTAGACTTAGATCCAGAAAGTATTAGACTATTGATAGCCAGTGTTAAAGCCGAGAAATCCAAAAATAAGAAAACCAAAAGAAAGTCAAAAGATTCTGACACTACAAGTGTGTCAGATGTCATGAGTGTCCATAGTGACTCGGATCTTATAGATGTTGATTTCAGTGAAAACAGCTTTGATGTCAAGAGCAACGATGAAGGCTACGAATGTAACAAAGGCATGAGTGACTGTACTTACATTAAACAGCCAACAGCTGCAGAAAACATTCAAATTCCTGACCATGATGATAAGTTGATTGCTCGATCATATGTACCTGTAGATTCTGTTGAACAAAAGACTGATGGCACCTTAAAGACTAAGTTAGAATACGAAACTGATAAGACTGATAACAATCTAAGCAATTCAGCAACAATATGTGATAATATAGATTTGCGAGAACCCGGGATTCCTCAAACTCATGTACCCAATGATTACCACCAAGAACATTTACAAACGCAAAAAGATGAATCTGAAGTACATGAACTTTGTTTTTACAACAAAGAACCAACATGCACTAAAGACCTCCAAAATTGGAACATAAAAGATTGCAACATGTCACCTGTTACATCATATGGAACTGCAGGTTCTCTAGAACAAAAGACTTATGATAGTTTAAAGACTGAGCTAGAACATGGACTCTATAAGACTGATAACAATGTGAGTACCTCAGCAATATTATGTGAGAATATAGATTTGCCGGAACCTGAGATCTCACAAACTCATGAGTCCAATGATTCTCACCACGAAAATGTGGATCCCTTGCAAACACAGAAAGGCTTTGAACCGGATTTAGATATGTACTGTAATGAAAAcgaccaaaattataataataccagccaaaAACATGTAGAAAGCAATCAAGAACTTGATGAACACTCAATGGAGTGTTTATATGCGGTGAATGACCATGTTTTGGTGCGCTACTGTGAcgAACTGTTATTAGGCGAGAGGTGCGCGCACGTCCTCTTTTTGCTGTGTCCCATTGCCGCAGACAATTTCATGGCTGTAAGCTGCGACGAGTTCGTCGACAAGACAGCCTTGAGATCGACCGAGCGTGTAGCGCTGATTCAAACGGTATTCACTAACGTAGTTGTGGTCGTCGACGAAACCTAG
Protein Sequence: MVRTYQRKYTNSRNGNTHPPYLQYSEEDLQKAIEAVQNGHLKVKEAAENYKIPMSTLSRKYRYKNCTQEKAGHPTLFSKEEENSFVEYIQLLSHWGFPLDSTDLRVFAQKYLNKIGKTIYGLKDNMPGVDWARNFLNRHKRVISNRTASNISSDRAKTTEQEIDDFFDRYEKSIEGVSPDCLINYDETNLTDDPGNKKYIFKRGCKYPERVINSSNSSISLMFAGTADGQSLPIYVVYKADHLWDQWLEGGPEGTRYNRSKSGWFDSVCFEDWFHTVIVPYAKKKSGRKVVIGDNLSSHFSQSVLQTCNELNITFICLTPKTTHLLQPLDVAFYAPLKKYWRDVLIKWKKTEGLKHKTLVKSSFPKLLKKLKNKLVENGTESINLIAGFNKSGLYPINSKRPKSRLPQRQIISEEQIENTASSVVIDILQEMRCPTSATGQTIRKRKCNVPPGMSITADDLERNQTEKTKPLQKQKRKSTQKQVSGKKKNKKSLAITNSSDKDMSNTDSDTTGGFKNEESNLLDTQPIAGPSGLCNAYAFDSGSTDVSSDDQRSQYEMIIENSKKPATGECVSIKGKGKGKRSKPKIEKSQMKISDLKKKLASGENLSIKGKGKGKKSKPKIEKSQMKISDLKNLDLDPESIRLLIASVKAEKSKNKKTKRKSKDSDTTSVSDVMSVHSDSDLIDVDFSENSFDVKSNDEGYECNKGMSDCTYIKQPTAAENIQIPDHDDKLIARSYVPVDSVEQKTDGTLKTKLEYETDKTDNNLSNSATICDNIDLREPGIPQTHVPNDYHQEHLQTQKDESEVHELCFYNKEPTCTKDLQNWNIKDCNMSPVTSYGTAGSLEQKTYDSLKTELEHGLYKTDNNVSTSAILCENIDLPEPEISQTHESNDSHHENVDPLQTQKGFEPDLDMYCNENDQNYNNTSQKHVESNQELDEHSMECLYAVNDHVLVRYCDELLLGERCAHVLFLLCPIAADNFMAVSCDEFVDKTALRSTERVALIQTVFTNVVVVVDET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01525889; iTF_01525890; iTF_01525893; iTF_01525886; iTF_01525887; iTF_01525888; iTF_01178393; iTF_01178391; iTF_01178392; iTF_00071323;
90% Identity: iTF_01525889;
80% Identity: -