Wsmi049960.2
Basic Information
- Insect
- Wyeomyia smithii
- Gene Symbol
- GATA-B
- Assembly
- GCA_029784165.1
- Location
- CM056646.1:191292489-191301407[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-18 3.7e-14 53.7 3.3 1 34 114 146 114 148 0.97 2 2 3e-18 2e-14 54.6 4.2 1 35 223 256 223 257 0.97
Sequence Information
- Coding Sequence
- ATGCAGTACTTCAACAATAGCCCCACGCACGATCCGACGCACATGTGGTCTTCCGGTATAACTGATTCCGAATACACAAAGGGAGGTCTGCCAGGTTTCCAGCGCATCGCTCCCAGTACCAATGCAGCCCGAGGCAATCATTACAATTCTATTTCATCCAGCTACGGCCAACAGACTGATTCCTGGCCATCCCATTATGAAGTCAGCGCGATTGCATACAGTACTGCATCCTCTGGAAATGGTCGACGGACGACGCCTACCTTGACACCAAACTTCTCGGCAGCCGCCTCACTGACTGCAATGGGCATAGAAGCGGACTTGTTTACCGAGGGACGAGAATGTGTCAATTGTGGTGCGATTCAGACCCCGCTCTGGCGTCGGGACGGAACAGGACACTATTTGTGCAATGCATGCGGCCTCTATCACAAGATGAACGGGATGAATCGGCCGTTGGTCAAACAGCCCAGACGCTTGCAGAATCCCAAAATATATCGATTGTGGCGCGAACGCAAACTAATCCtgtttgttataaaaattgttaTTGCAGTGGCCGCTGATCAGGGCGGGGATCACTATAAGAGCTATGGCTACAATTCCTTGACAACTCGCACCACTGATGAGAAGCAAAGCCGAAGACTGAGTTCAGCACGACGCGTCGGACTGCAATGTTCAAACTGTGACACTAAAAACACTTCGCTGTGGAGACGCAATCAGGTCGGTGAACCGGTGTGCAACGCGTGCGGTCTCTATTACAAACTGCACAACGTGAACCGACCGTTGACAATGAAGAAGGACAACATACAGTCACGCAAACGCAAACCGAAGGGCAGCAAAAACACCGATGGAGCCACATCGACCAGCTCGAAGAGCAGCAATAACAATAGTAACGGCGCTagtaacaacagcaacaacaacaacaacaacaatagcaGTAATAGCACCACTACTAGCAGCAATAATAATTCGAGCAACACCGCCAGCTCCTCCATATTGGGAAATTCCCTTGTCGaGCTCAAATCCTTAAAGGCAACGGTGGGCCATCCGAGTATCATCCAATCCACTTCGACACATTCCAGCATCGGTAGCAACGTGTCTCCAACCCATCAGTCGCCATCACCAGCACATCACAACCAGCTTTCCCCGATTCCATACACCGAACAAATACCGTCACCAACCATCATGAGTActaacaataacaacaataataataacgcCAAGTACAATAACCAGAAGAGCGTCTTTCTGATGCCACCCTACGCAACATCGTTGGCCAATGCCAGCTCATTGGCCAATCACCAAACAAACGTGTCATCGTTAAGTCCAATGGGCTACCATCTCAGCAGCAACGGACAGTCTAATGGTTCCATAATGAGCCCAAAGTTTTCTCAAAGTCCATCGGAATCGCCTAGTAGCATGTATTACGATATGATACATTCGGACGTCAACGGTGTCGATCAGCACAGCCTGGGGTCGATAGTTAAAATGGAACCAATGGCGAACCACTACTCGACAGCCTATCAGACGATTCACCAGCAGGTGGTACAACAGCATCACCACCACCAGCAGCAACAGCATCAACAAATGCAATTGCAGCATCAGCAAATGCATCACCAAAGCCGAAGCCCGTCAGTTTCCGATGAGAACGAACAATCCCCGGAATGTCTTGAAAACAAGCATAACATCACTCGGCCGACTGTGGTCTCCATGCCCAGCTAA
- Protein Sequence
- MQYFNNSPTHDPTHMWSSGITDSEYTKGGLPGFQRIAPSTNAARGNHYNSISSSYGQQTDSWPSHYEVSAIAYSTASSGNGRRTTPTLTPNFSAAASLTAMGIEADLFTEGRECVNCGAIQTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLQNPKIYRLWRERKLILFVIKIVIAVAADQGGDHYKSYGYNSLTTRTTDEKQSRRLSSARRVGLQCSNCDTKNTSLWRRNQVGEPVCNACGLYYKLHNVNRPLTMKKDNIQSRKRKPKGSKNTDGATSTSSKSSNNNSNGASNNSNNNNNNNSSNSTTTSSNNNSSNTASSSILGNSLVELKSLKATVGHPSIIQSTSTHSSIGSNVSPTHQSPSPAHHNQLSPIPYTEQIPSPTIMSTNNNNNNNNAKYNNQKSVFLMPPYATSLANASSLANHQTNVSSLSPMGYHLSSNGQSNGSIMSPKFSQSPSESPSSMYYDMIHSDVNGVDQHSLGSIVKMEPMANHYSTAYQTIHQQVVQQHHHHQQQQHQQMQLQHQQMHHQSRSPSVSDENEQSPECLENKHNITRPTVVSMPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -