Wsmi017662.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Wyeomyia smithii
Gene Symbol
Hivep1
Assembly
GCA_029784165.1
Location
CM056645.1:14681538-14706177[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00073 0.08 15.1 1.9 1 23 437 459 437 459 0.99
2 8 0.014 1.5 11.1 2.5 1 21 465 485 465 489 0.89
3 8 0.22 24 7.3 0.2 1 20 878 897 878 898 0.95
4 8 5.4e-06 0.00059 21.8 2.4 1 23 1657 1679 1657 1679 0.99
5 8 0.00033 0.036 16.2 5.8 1 23 1685 1709 1685 1709 0.92
6 8 0.0043 0.47 12.7 0.6 2 23 2303 2324 2303 2324 0.97
7 8 0.0057 0.62 12.3 0.5 1 23 2330 2354 2330 2354 0.91
8 8 0.008 0.88 11.9 2.7 1 23 2375 2399 2375 2399 0.92

Sequence Information

Coding Sequence
ATGAATTTGGGAAAAGACAGTCTTGTAGCGCAGCGCTTGGTGTACGATACAGTACAGGTTGCCGGAGGAGGACACGAAATTGATATTGATGGGGAGATGCATGATCCGGGTGGAGAGCTTCCGCCCGCTATGGAAATAACGAACAGCTGTAATGAAAGTAAAACGACGTCAGTGAGTCAACCGTACAGCAGCAGCAAACAGCCGATCGCGAACCCAGCAGCGGAGAGCAAAGTCAGCGCGGAAAATAGCATTTTGCATCATTCGCAAACACCGCCAACGCCATCGCGACCGCAGGCTGCCACATTCAGCGTCTGCCCCTCGCCGAACGCGACGAATTCTTCTGACCTAAAGTACCTGCATAAAAAATTCAAACGGATCGCCAGTGCCACACtgagcaacaacaacaacaacatcaacaacGATAGTGGCAGTGAATCGAAACTCGTTACATCAGCAGCGGCGGCCACCagcagtagtagtagtagcAGTAGCATTCGTAGCAGTAGCAGTAGTAGTAGTGGTGGTGATAGTAGTACTAATATTGTAACTACTACTGCTGCTTTGCCAGCTGGTACTAGTATCGTAGTAGTAGCAGTTGAGAAGCAACAAGCAAGTGCATACGGTTCCCCCGCAGTGCGACTACCCAACTCATTGAGCTACGAGTCTGTCCAGCGACTTCATCAAcaccaacatcaacaacaacaacaacaacaacaaaatcaaCATACGATTGCATGTGCCAACGAGGGTGATTTAGTCGACTCATACCGACCAGCGACCACTGAACGAATTATTCGTACAGGAGGACAACCAACGGTTGGCAGCGAGTGCCACAGTCGCCCCCAATTAACCTCTTTGAGTAGCGAACACAGTAACGGTGCTTCCTTGAATCGCACTAACAACATTAGTGGCGTCAGTAATAGTtttatcagcagcagcagcagcagcagcagcagcaaccacAATCATATTCCGAGAGAGAGTGAAGATTTGAAAACGTACTATCCCAGTGTAAATAATAACAGTGCTATCAACAACATAAACTGTGATTTAAACGAGAAGAACCAATGCCCAAGCATCCTGAACAACAGCAACCCTagcggtggtggtggtggcagTGTAGTAACGTTATCAGCCGACTCGATTCAGGCCATTCAGCAGGCGGCGCAGTACGAAACCGCCGTCAATCACGGTCCTCCGGCGGGGATTGTGGTTAATTTCGGCTGCGATCCGGCTTCGACCGCTCCGCTGCACTCGCCGCTGACCTCGGCGAATCTAATCAACACGGCGGCCGCCACCCCGGGCCGCTATGTGTGTCCGTTCTGTCAGATGAACTGTAGCAAACCGTCGGTCCTGCAGAAGCACATTCGACGTCACACCAACGAGCGTCCCTTTCGGTGCGACCCGTGCGGTATTGCATTTAAAACCAAGAGCAACCTGTACAAACACTGCCGATCCCGAGCGCACGCATCAAAAAGTCAAGGCGAGGATATCGGAGCCGTTATCGATGAGGACGGCGGTTCTCTCGGTGGATCGGATATAGAGGATAAAGAGCTGAGCAACAGTGGATCTGAAATTATAAATCGAGGATCACCAATGGATGATCGAGTGCATTCACCCCAGCTGCTGGTGGAAAAACCCTACAAGCCCAAGTTCCATAATGCAGCCCTGTACGCCAAACTGGACGCAAAGCTAGCCAATAAATTTCCTTCATCGGGGCCAAACAGCACCGGTAGTGGACTTCCACCGGCGCTGAACGTCAGCCATTCAGCACCCCCAACTCCACACTATTTCaatggccaaaacgtGGAATCGCTTGAGCAGCACATTTCAAAGCTCATATCGGATAACGAAGCCATCGTGGAAGTGGTTGAGCCACCGCTTCAGAAAAAGTATCATAAAATTACCGGTATAACCCGAGGTATATCAGTAGGTTCCAGTTCGTCCCACAGTGGGCCACATGAGTCCGGAACCAGCAGTAGTTCTAGTGGTAGCAGTAGTTCCAAACTGGCAAGTGctttgttgcagaaaagaaacaGCGAGGAACAGTTACTGTATCTTCCACAGCAGGGACCGCAACAGCCATACGTAAACCCATTTCCCAGCGAGCCAAATGTGATAACAGTTTCCAATAGTAAACCAAACGTAAGTTCCAAACCGGCGGTAGTTCAGTATGGACCTAATCACCACGCAGTGTCGGTTCAGATGGCGATTCGGTTACCTAGCGAACAGCATGATCAGCTGTCCGCTCAACAAGTGCAATATCAGCAGCCTTTAAATCTGAGTAAACCAATGCCCTCGATGGGGTTGGAACCATTGGAACAGATAGAACAACCTCGAAAACGGAGCTCTGGCTCCTTGTACAGCCGAGAACAATCACCATCGTCTTCTTTGCAATATCCACCGTCGCAGACGGCATCGATTCACACACAACCTGCGATTCTCCAACAAACACCGCCTACACCTCCGCAAACTCAACCAGTatcgcagcaacagcaacaacaacagcagccaATGACAGTTTCGGATCATCCCCAGAATCCGGAACGTTCTATCATCAAAGATCTTCTGCTTAATTCACGTGGCTTCGGAGTCGTACAGAATCCGGAGAATGAGAACATTGAAAAGCTTTTCACCTGTAAGTCGTGCAACGTAAGCTTCCGGGATGCGGAAATCCTCAAGTACCACATGATTTGCTACTGTCAAGGAAGTAGCAGCAATCTGAACAGTCCTTCGTCTAGTGCCCCCATAAGTCCGGTTGGTTCGCCGTCGCAGTTCAATCGATCCAAATCGTACAACCCAAATAGTCTGAAAACATTGGCCCGGGTATCACTGAATCCACCGCCTCGAAACCCATCCACCCTTTCCAAGCTGGCCAAGTCTCAGCTGAGGTTACCGCGGATTCGACCGGAGAATATTTCGTTACTATCTGCGCTGGCCAAGGAAAACTTAGCACTCAACAGCATGGGAAGCTCTGCGAACAGTCATCCATCGGAGATGCAGGTGTCACCAGCTATGGCCAAAATTGTGGATGTGGTTCAAAATCCACTGCCATCGCCAGGTCCCCTATTGGGAAACACTCGATTGGTTGATTTTCAGAGTAACAAAGCAATGTCTGCTGAAGATGCTTCAGTGACACAGAAACGGGCACTCGTCATCACTGTTGATGAACACCAGCAGACTCTCCGGCGAGTTCACCAGTATCCTAACTTGCAACTGTTTGGAGGAAATGTGGAAATTGTGGATCGTAATTGTCTGAATATATCACCTCATCGGTATACATCCGGTGGTACGGTAACGAGATGCTCACCAGAAATCGAGAGTGGAATGCAAGAATATAGCGGGCGCGTTAACAGCATGCATTCGGGGGGAACTTTCACGCAGTTACCGGAAAACAACCGAAGCACTTCACCCGCTCCAATGAACCCAGATACTCCGAAATTGGTTGTGACTATTACACCGACGCTTACACCAGCTCTGGCTACTCCCAGCTACTACGGGAATCAACAGCAAGTTTCGGAAGGTAACAACAGTGCAGTTTCTGTTGCTCAACCCGTAACACACTTTCACTTCCCACCAATCAATCCGATTACGGCGTACAACCCATTAACACTGCCTCAGGTATCACCCGGCCAGGCACAACAGATAATGCACGGTGGTAAACTGATACCATTTGTACAGGGTATTCCCGGCCCAAATTCGATGCTGATACCAAACGATCACAACCCGCAACCGAAAAGTAGTCCTCGCATGATAGTCAACCAATCAACCCACCCACTAATGCAATCGATCTCGATCTCCACCGGAAACCACCAACTGCCGGGTCCAACCGTGAAACTACAATCGTCCTCGCTGCTGACGATCGTGAAACCTACTAACACTACAGCCATCGATCGGCGTAACGAAATTGACGAAGATCTAGGACGTAGTAAAAAACCTTTTCTGCAAGTAGCACCGGGCAAAAATGGACTGTCCAAAGAAATCTGGTCTCCAGCAAAGCAGGAATACCCTGTGCCAAAAAAGAGTTTCAATTTCTCCCGAATGGCGGACAATATAAGCCCGCGGAAAAAAGAACTCATCGAGCAACCGCCAATCAAGAAGGAAGAAATCCGTTACTTTAACTTCGAAAATTTGATTTCAAAATCGGAGATATTAATCAAAACAACAGCCACCGCGGTCGGTCCGCTGGAGTGTAAAGCGGAACCGATGGAGGTGAAACTGGAACCACCACCATCAACCATCGTAACGAAACCGAAATTTCTGCGACCAAACTCACTGCCGCTCAAACCTGGTACCTTTACACCGAAGCGCCATCACGGGATCACACCGACTCACAACACGATGCCGCTGATATCACCCGAAACACCCCGACCCTCGAAATCCTGCCGAGAGTTGTACTTCAACGGCCACGCCTATACCAACATCGGGTTGAAATCGAGCACTAAACCATTCTACTGCACGGTCAACAAAACTCAACCCTTCTACGTTCAAACCCAGCAGAAGCAGCTTTCGATGTACAGCAACTGGCAGGTCCATCCGGAAAATGACCCTCATCCGTTGGGTCTGAAACCGGTGGCCGTTATGTCACTCTATGACAGCAGCCAACAGCGTAACCATCGCTATTCGATCGCCCAATCACATGTGCCGCCACTCTCGGTGGTCAATTCAAGTTCCTTCAACAATGCCGTCATGAGTACGGTCGAAGTTAAAACCAACTTCCCAGCGTATTCACTGCAACCGATGACCTCCCCAAAACCCACACTGGTGCCATTAGCAAGTGGACAGCATCAACaagtacaacaacaacaaacgcaATCAACGCAAAGTTATCTTCAGTTCGGTTATCACGATAAGGGAGCCTCGAACGATAGTGTTCCGGCCAGAAGTGAATCTTCGGAACGCACCCTGTCCGGTGGCTTTGAGAGTACGGAAGAATACACCTATGTGCGGGGTCGCGGCCGGGGCAAGTACGTCTGCAAGGAGTGTGGCATTCGCTGCAAGAAACCTTCCATGCTGAAGAAGCACATCCGAACGCACACCGACGTCCGGCCGTACTCGTGTCAGTACTGCAGCTTCCAcTTCAAAACGAAAGGCAACCTGACGAAACACATGAAATCGAAGAGTCACTACAAGAAGTGTTCGGAGTTGGGTCTGAATCCGATTCCGACCGGGGTGGATGATGACggtggtgatgtcgatattgaGGGCGACCAGCAGTCGATTTCAAGCGAGCGCACTTCGACAATTCCGGGCGACTCCGATAGTGGGTCCGAAAGTGATGGCGAGGATAGTGACGACAGTGATGAATCGAAGAGTCGCCTCCCGGAGCACGAAGCCGCCCACTGTCTACTATCTCTGTCGATGACACCGCCGACCAGTTCGCAGATCTCCAAGAGCTACCCAAGCCCGGTGCCGTACAGTAGCCAGCAGTTGGTGGAACGAGACCGCAATCGTCATCAAGGATACCCCCTAAACGATGCCGTTTCCCCTGGGGGCCTAATTATCTACCCTCAACAGTCACCAGCGGCCTTGGTGGATCAATCTACTAGTCAACCGAACCGACGCATAATCACCTTCGGTAACACCCCGAAGGTCGAATTTAATCTGCTCAAGCACGAGCAGTACTACTCGGATCCGAACCTCAGCAAAAAGAAGCGGGACATGGCAGGCACCGCCAATCAGGCTGTGTCCTTTCAAAATGAAGACGATGACGATGGTGCGATGCCGATTGATTTAACGAAAAAGGTGAAAGAAGTGCCCACGGCGTTGCAGTCTCATTCGATTCAGGAAGCAACCGGTTACTCACACCATTCGCATTATCAACATCAAAACCATCACCAGTTGAGCAAGGGATCGAACGTTCTGCTGCGTGCTCAACATCATCCAGAACAGTTGCCGAACGCGATATCGCAAGTCATCGTGCGTATGTCGGATGTCGTTACGCCGATCACCGGAACGGCCAATCTGCTAACGACGTTGGTTTCCAACACCGATAAGATACCTCTTACGCACGGGTTGATTCCAGGAAGCGGGAAGGAACTGGTGGATGACAATGTTTACTTCCAGGAGTACATTAAGCAGCGGGCACTGCAGGACAGTCGTATGAAGCAGAGTCAGATGAAGAGTGTAACCAATAGTTCACAGTACGAAGATAGCCAGGAAACTGCTGGTGCGGTGGATAGTCAGATGCCCTTGGTTAAGTCGCAAAAGCTCGAAGCTCCGCTGGCGATTACAACTGCAACTACTTTGGTTGTTAATGGGCCAGTCAATAAAGGGGTGGTCCCTCCTGTGGAGAAAGTTTATCGAATATTTAATGGTAAAAATGAGTTACATGCGAAGGTTGCGAATACTGATCTAGTGAGTAGGGTGGACGTTCCAGTTGTGGGGAATGAATCGATCCCACAAGAAAGTGACCATCCGATAACGGAAGTTGGAGAAGCGGTGGTTAATACTGCCGTTGGCAGTGGAAAGTTAGATTTGTTGGTTGAGCCGATTAGATCCAGGAGTAATAGTGTGAAGTcgaatgattccacgaagccaTCGATTGCAACTACCGCCGCCGCAACGGCCGCTGCCGGGTCAGGTAAGGAGAGTGCTAAAAGTGTCGCTTCCGAGTACCTCAAACTGACGAAGTCAGTTACGCTTAGAAAGCGTGAGGATAGCGAAAGCGGTACAGCTTCGGATCAGGAACCACCTGTGGTGGAGAACAAAATAATTCCAACACCGCCAATTGTTGCTCCTATTGTGCCGCCTATCGTAGTCGTTCCGCCTACTTCGGCTGCAACTGGTGAACTGGGAGGAATCGTAGCTCGAACCGTCGTGGTTGGTGAGGACGGTTTCAAATCGACCCCCGCGACAAATGAGTTCGCCTCGTTAAGTCATTTCCAAGAGGATGGCGGCCGGCCGGTATGTGAGGTGTGTAACAAACGCTTCCTGAAGATGTCTCAGCTGAAAATTCACATGAACATTCACTACATGGAGCGGAAGTACCGCTGTGAACCCTGTGGAACTAGTTTCCGTTCGCAagggttgtttttgaaacaCGAAAGATCTGCCACCCATCGGAATAAGGTTTCGATGACGACAACATTCGGTATAGCAACCGATTCGAATCCTCGTCCGTTCTACTGTAAAGATTGCGATGTCGGATTCCGAATCCATGGCCACTTGGCCAAGCATCTGCGATCAAAgatgcacgttctaaaactcgAATGTCTCGGGAAACTTCCCTTCGGAACGTACACCGAAATCGAGCGCTCGGGAACGAATCTAACCGAGATCGATACTACCGATTGTGAGAACTCGCTGTCCAGTCTGAAGCGGCTGGCCATTCGGCTGCACGTGAAGGATCCGGCCAATGTTCTGCCTGGTGGTGGCAGTGGTGGGCTCGGTCCTTCCGGCAGTGGCAACGAAACGGACAGCTGTGACGATAATCAGTACGAGAATGACAACGACGAATCCAACGTCGAGGACAGCTCCAGCTCGAATGGACCAACGAATAACCGGGACGATGAAACGGACAATGACGGTGAACCATCGTCGGCCGGCGAATGCAATGGGCCCTTGATTCAAccaatcaacaacaacaacaacttgAGCATGAAGCGAAAACCTGATGACAGCAGTACAAGCGGCAACTTCGAGCCGAGCGAAGCAAAGCGGGCACGGATGCAGCCGGCTACTGCCGCCATCGACGTGAATCCGGGAGGGCAAACAACGTCACTGCCACTGCCGGGATGTGATTCATAG
Protein Sequence
MNLGKDSLVAQRLVYDTVQVAGGGHEIDIDGEMHDPGGELPPAMEITNSCNESKTTSVSQPYSSSKQPIANPAAESKVSAENSILHHSQTPPTPSRPQAATFSVCPSPNATNSSDLKYLHKKFKRIASATLSNNNNNINNDSGSESKLVTSAAAATSSSSSSSSIRSSSSSSSGGDSSTNIVTTTAALPAGTSIVVVAVEKQQASAYGSPAVRLPNSLSYESVQRLHQHQHQQQQQQQQNQHTIACANEGDLVDSYRPATTERIIRTGGQPTVGSECHSRPQLTSLSSEHSNGASLNRTNNISGVSNSFISSSSSSSSSNHNHIPRESEDLKTYYPSVNNNSAINNINCDLNEKNQCPSILNNSNPSGGGGGSVVTLSADSIQAIQQAAQYETAVNHGPPAGIVVNFGCDPASTAPLHSPLTSANLINTAAATPGRYVCPFCQMNCSKPSVLQKHIRRHTNERPFRCDPCGIAFKTKSNLYKHCRSRAHASKSQGEDIGAVIDEDGGSLGGSDIEDKELSNSGSEIINRGSPMDDRVHSPQLLVEKPYKPKFHNAALYAKLDAKLANKFPSSGPNSTGSGLPPALNVSHSAPPTPHYFNGQNVESLEQHISKLISDNEAIVEVVEPPLQKKYHKITGITRGISVGSSSSHSGPHESGTSSSSSGSSSSKLASALLQKRNSEEQLLYLPQQGPQQPYVNPFPSEPNVITVSNSKPNVSSKPAVVQYGPNHHAVSVQMAIRLPSEQHDQLSAQQVQYQQPLNLSKPMPSMGLEPLEQIEQPRKRSSGSLYSREQSPSSSLQYPPSQTASIHTQPAILQQTPPTPPQTQPVSQQQQQQQQPMTVSDHPQNPERSIIKDLLLNSRGFGVVQNPENENIEKLFTCKSCNVSFRDAEILKYHMICYCQGSSSNLNSPSSSAPISPVGSPSQFNRSKSYNPNSLKTLARVSLNPPPRNPSTLSKLAKSQLRLPRIRPENISLLSALAKENLALNSMGSSANSHPSEMQVSPAMAKIVDVVQNPLPSPGPLLGNTRLVDFQSNKAMSAEDASVTQKRALVITVDEHQQTLRRVHQYPNLQLFGGNVEIVDRNCLNISPHRYTSGGTVTRCSPEIESGMQEYSGRVNSMHSGGTFTQLPENNRSTSPAPMNPDTPKLVVTITPTLTPALATPSYYGNQQQVSEGNNSAVSVAQPVTHFHFPPINPITAYNPLTLPQVSPGQAQQIMHGGKLIPFVQGIPGPNSMLIPNDHNPQPKSSPRMIVNQSTHPLMQSISISTGNHQLPGPTVKLQSSSLLTIVKPTNTTAIDRRNEIDEDLGRSKKPFLQVAPGKNGLSKEIWSPAKQEYPVPKKSFNFSRMADNISPRKKELIEQPPIKKEEIRYFNFENLISKSEILIKTTATAVGPLECKAEPMEVKLEPPPSTIVTKPKFLRPNSLPLKPGTFTPKRHHGITPTHNTMPLISPETPRPSKSCRELYFNGHAYTNIGLKSSTKPFYCTVNKTQPFYVQTQQKQLSMYSNWQVHPENDPHPLGLKPVAVMSLYDSSQQRNHRYSIAQSHVPPLSVVNSSSFNNAVMSTVEVKTNFPAYSLQPMTSPKPTLVPLASGQHQQVQQQQTQSTQSYLQFGYHDKGASNDSVPARSESSERTLSGGFESTEEYTYVRGRGRGKYVCKECGIRCKKPSMLKKHIRTHTDVRPYSCQYCSFHFKTKGNLTKHMKSKSHYKKCSELGLNPIPTGVDDDGGDVDIEGDQQSISSERTSTIPGDSDSGSESDGEDSDDSDESKSRLPEHEAAHCLLSLSMTPPTSSQISKSYPSPVPYSSQQLVERDRNRHQGYPLNDAVSPGGLIIYPQQSPAALVDQSTSQPNRRIITFGNTPKVEFNLLKHEQYYSDPNLSKKKRDMAGTANQAVSFQNEDDDDGAMPIDLTKKVKEVPTALQSHSIQEATGYSHHSHYQHQNHHQLSKGSNVLLRAQHHPEQLPNAISQVIVRMSDVVTPITGTANLLTTLVSNTDKIPLTHGLIPGSGKELVDDNVYFQEYIKQRALQDSRMKQSQMKSVTNSSQYEDSQETAGAVDSQMPLVKSQKLEAPLAITTATTLVVNGPVNKGVVPPVEKVYRIFNGKNELHAKVANTDLVSRVDVPVVGNESIPQESDHPITEVGEAVVNTAVGSGKLDLLVEPIRSRSNSVKSNDSTKPSIATTAAATAAAGSGKESAKSVASEYLKLTKSVTLRKREDSESGTASDQEPPVVENKIIPTPPIVAPIVPPIVVVPPTSAATGELGGIVARTVVVGEDGFKSTPATNEFASLSHFQEDGGRPVCEVCNKRFLKMSQLKIHMNIHYMERKYRCEPCGTSFRSQGLFLKHERSATHRNKVSMTTTFGIATDSNPRPFYCKDCDVGFRIHGHLAKHLRSKMHVLKLECLGKLPFGTYTEIERSGTNLTEIDTTDCENSLSSLKRLAIRLHVKDPANVLPGGGSGGLGPSGSGNETDSCDDNQYENDNDESNVEDSSSSNGPTNNRDDETDNDGEPSSAGECNGPLIQPINNNNNLSMKRKPDDSSTSGNFEPSEAKRARMQPATAAIDVNPGGQTTSLPLPGCDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-