Basic Information

Insect: Wyeomyia smithii
Gene Symbol: -
Assembly: GCA_029784165.1
Location: CM056645.1:118854699-118872829[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.016 1.7 10.9 3.7 1 23 318 340 318 340 0.95

2 15 3.1e-05 0.0034 19.5 2.9 1 23 371 393 371 393 0.96

3 15 0.0027 0.29 13.4 3.0 1 22 411 432 411 435 0.90

4 15 0.17 18 7.7 0.1 3 23 442 463 441 463 0.95

5 15 1.9e-05 0.0021 20.1 1.1 1 23 469 491 469 491 0.98

6 15 0.41 45 6.5 0.1 1 23 499 522 499 522 0.97

7 15 0.076 8.2 8.8 4.8 1 20 528 547 528 550 0.94

8 15 7.3e-05 0.008 18.3 2.4 1 23 556 581 556 582 0.96

9 15 5 5.5e+02 3.1 0.3 3 23 760 781 758 781 0.87

10 15 0.016 1.7 10.9 0.5 2 23 799 822 798 822 0.90

11 15 1.9 2.1e+02 4.4 0.8 2 23 828 850 827 850 0.95

12 15 0.0064 0.7 12.2 0.4 1 23 856 878 856 878 0.97

13 15 0.017 1.9 10.8 0.4 3 23 888 909 886 909 0.96

14 15 0.018 2 10.7 3.0 1 20 915 934 915 937 0.95

15 15 0.002 0.22 13.7 0.3 1 23 943 968 943 968 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.016	1.7	10.9	3.7	1	23	318	340	318	340	0.95
2	15	3.1e-05	0.0034	19.5	2.9	1	23	371	393	371	393	0.96
3	15	0.0027	0.29	13.4	3.0	1	22	411	432	411	435	0.90
4	15	0.17	18	7.7	0.1	3	23	442	463	441	463	0.95
5	15	1.9e-05	0.0021	20.1	1.1	1	23	469	491	469	491	0.98
6	15	0.41	45	6.5	0.1	1	23	499	522	499	522	0.97
7	15	0.076	8.2	8.8	4.8	1	20	528	547	528	550	0.94
8	15	7.3e-05	0.008	18.3	2.4	1	23	556	581	556	582	0.96
9	15	5	5.5e+02	3.1	0.3	3	23	760	781	758	781	0.87
10	15	0.016	1.7	10.9	0.5	2	23	799	822	798	822	0.90
11	15	1.9	2.1e+02	4.4	0.8	2	23	828	850	827	850	0.95
12	15	0.0064	0.7	12.2	0.4	1	23	856	878	856	878	0.97
13	15	0.017	1.9	10.8	0.4	3	23	888	909	886	909	0.96
14	15	0.018	2	10.7	3.0	1	20	915	934	915	937	0.95
15	15	0.002	0.22	13.7	0.3	1	23	943	968	943	968	0.92

Sequence Information

Coding Sequence: ATGCAGCACAACCCCCAGGCGCACTTGTTCCAGATACAGGTTAAATCTCTAATTAAAACTCTTAAATGTCTGCAGTCGGACGATAAATACCAGGCGCTACTGTTTCTCATTTCGGCCATTAAACTGTACGTCAAATTTTTGTACAACGACACTCAAGAGCGCATCTATAAGCCGTCAATACTCAAAGAATTGAACAACATTCAAAATGTGATTATTGCGAATTTGTTAAAGTCTCGCAACGCTGTTTTGGCACCTTCCTCACTTTCTACTCCCGTATGTGAACTACGTAGTAGCGTTCGTAATAATATCCAAGAGGCAAATAGTAGTGATGAAGTTTCACTTGCACATCCAGGATCGAAATCACTACTTCCACTTATATCCTACGAACTTAAAGGTAAACTGCTGCGAGGTGGTTTGTTTGAGGATATTCCTCTGGTAGGAGCAGTCAAGTTTAAACCTCGCAAACGTTTAGGACTAATAAGCAGCTTTGGTAATGTTCAGCTTAATCGTTCCCTGGTGCGACTGATCGCTTCGAAAAATTTCAAGTTGTTCTTCAACATGTTCGAGCAAAACATTTTCCCAACctggaaaatattcaaaacagaTCGTCCAATCCGATCACGTGCTCGACCTACAATGCCTGCTATCTGTTATAGCGGAGGATCATCACACTCGCCTCCAGCAGCTTATATCAAGAAAGAAGATTTTGACTTTGATCCACCATATTCACTTGCTGGAGATGATCCATGTTTTGAAGAGTTAAAAGATGACGATGATGAGCTTCTAATGCTGAAAGAAGAAGACGAGGAAGAGGATGACTCTGTTTCCAACGAAATGTTTTCCGAAGAATCATCAACTAATAATACTTCGCTAATGCTTTCCTCCGACACAAATACTTTGGATACCAACGATTCCAATATGCTTTCTGGAGAGCGGTGTAAAGAGCAACTTTACCAATGTCTTCTATGCGATAAAAGCTACAGGAAACGTAAATCACTGGTGATTCATTTCAGTCATCATCCTGGATTTTGTCCGGACTGTGGTAAACAAAGAGGCGTAACTTCAGAGgAAATAATCGAACATAACAGAGTATATCACAAGAACAGGCCTCATATTTGCGAACATTGTGGAGAGACTTTCACTCGAAACCAACAGTATCAAGTCCATATGCAAGGCCATTTCATAAGCAAAACTCGCGTTCAGGAGCAAAATTGTAAAAAAACATATAAATTTAGCTGTCGCACTTGTGGCATTGTCTTCAATAATCAAAAGTATTTGGAAAAACACGCTCAAAAAACTTGCCACCAGACAGAGGGCGTGGCTTGTGATACTTGTGGTGCGATTTTCTCTTCTGATATTAAACTCTACCAGCATATTGCAAGAACTCACGAAAATGAAAAACGCTTCACGTGCGAACATTGCGCTAAAGTATTTAATCAAAAAGCGAATCTCGATCGGCACCTATTGATACACACCAAtgtctctgaaaaaaattacCCTTGCGAACAGTGTAGTGCCTCATATCTATCAATGACTTCTTTGAAGGAACATATTAAGATCGCGCATAGTGCGGATGACAAATTTGAATGCAACATCTGCCACAAACTGTTTGCTGCCAAACGTTCTCTGAAGCGCCATAAATTATGTCACTCGGAAGAAAGACCTTTCCCCTGTACTGTAGAGAACTGCAAAGAGGCCTACAAGAACCAATCTCATTTGGTGCGTCACATGAAGACAGCACATCACATTGAGCCACCAACCAAACGAAAGACTATCAAAGGTGAACAGGGTGAGTTTATTCCACTAGACCCCATTGGCACTGGAGATTCCAATGCAAGTAAGAGCAATCCATTGAAGAAATCAGTAATCGGGGGTGGTAGTGACAAGTCTATTGGCGATAGTAGTACCAACTTCAGCGATAACTTGTCTTCATACAATTATGACTATGTTGATACGGGTGTGGCTACAGTTGACTCTGGTCAACAGCGTTTGCAAATGCTTGGACCTGGTGTAACCAGAATGAGTGGATCTGTTGCGGTGAATTTCAATGATCCAGTAATTGGATACCCGGGAGCATCCACTGCGAACGAGTCATTTGAATGGCAGAATCTCGAATTTGGTGGAGGAAGTGTCAATAGCGTAGGTAACAGTTCAGGCCCAACACAGCTTAATCAGCTTAACCAAGGCTTCATGGACAATAGTCACGTGGCTAGTTCTTCAAGTTACATGGCTGCTGGTGTACCAGGAATGAGAACATACACGGATCCAAACCTAATTTGCGAACATTGCGATGAGGCCAATTTTCTTAATAGTCAGCAGTTGCAAGCTCACATACAGGATCACTTTACTGCAAAAGAAGGCAAAGAGCCTTCCGGAAAAAAGCTGCAACGATTATATTGCAAAACTTGCAATTTGGTGTTCTCCACCGGCCCTCAGCTGGACCGACACATCCAGAAAACCAATCATCACACGGACAGCATCGTGTGTGAACTATGTAGTGCAATATTCAACTCTAATCTCAAAGTTTATCAGCACATGCTCAAATGTCATAAAAATGAAACCTGGTATGCTTGCGAACAGTGCTCTAAAGTGTTTATTTTGAAGCAAGAGTACGACAAACACCAACTGGTGCATCAAACAGTAACAGATAAATCTGTAATTTGCGAACATTGTGCGTCGTCATTTTTCTCGCAGGAGGCACTTAAGGAACATATCAAAATTTCGCACACAGTGGAAAAGAAATACGAGTGCAACATATGCAACAAACTGTTCGCAGCTAAGCGATCCTTGAAACGCCATAAACTTTGCCATGAGGAGGAAGGCGCATTCCCGTGCCTCGTCGAAGATTGTAAAGAATCTTTCAAAACACCTACCACCTTGGCGAAACACAAAAAGTTGGTTCACAGCATTGGACCTGACCCCAgtgaaaaaactggaggaaaagGCAAAGTGAATACAGCAGCGAAGGCCGCCAATGATAAATTGCTACCTGAACCACCACCAGCTACAGGACCATCGTCTAACACATCCGTTCTCGGTTTGGGTCCAGTTCCCGGTACGTCTGTCCCAATTAAGTTAGAACCACGTACTCCAGGAGGTATGCTAGTACCTCCTTCCCGAACTAGCAGCACGAGTAGTGCTGGAGCAGGCACCAATGCAAATACAAATCCGTATGATCCGTATGGTGCGGGGATACATTATAATAATGTAATGAGCTCTGGTCAACAACCGGCTACACACTTTGCCGTACAAAATCCGAACAACACACTTCATTACGGCACAAATGCAACTGGTAGCCGCACGGGAAGTGAACAGCCCATGACATACCGGATGGATCCTAACGCCTCGCCTTCTGCTCCTGGACCTTACAGCCATGGTTCCGCTGGAGGCTATGGTCAGATGAACAGTTCCTTTGAATGGCGAAACATGGAGCTGCCAAACAGTATTGACCCAGGAATGGGAACATCTAGTGCAGGCGCTGGCCAGACAGTACAATCTGTAACTGCAGCAATGAAAGCAAACAAATACTACCCAGTGATGGAAACCAGTGGCGCCTCAAGTGGTGGATTTATTCAGTCCCAACAGTCACCTCACCAtctacaacaacaacagcaactccATCAACATCATCCACAACATCCGCATCACCAGCAaacgcaacaacaacaacaagctcAACAGCATCAAGTTGTTACAGGTGCCGCAGTGCTCCAAGCGAAAGCTCCGCAAGAATCACAGCAACATCATCAGCAACAAATGATAAATATAAACAGTCAGGAGTTTATGGGGTATCAGGAAATTTGGAACGCGAATATGGTAAAAATGGAGTATCAAGATGACGTAAACAACTCGAATGTTTCAGGAAGCTCGTATAATAATATTGGAAACATTTTATCGAATCTAGAGCTGATAGGTAATAATAGCAACTATGAGCAAAGCTATGACATTGTACCACCCTCGGCTAGTGGTGGTGATGCACAGCATTCACAGCAACAACAAACCAACCAAACGTCATCGCAAGTGCCACAAATTGCACCTAAGAATAATTATCATAAGCAGCATATGcaccagcaacaacagcagcagcatcaacAACCAGGAATGCTAAATGTAGAAAATCCTATGGTGGTTCCCCATCATCATCAACAGCAACAATATTTTCAAGAACATCATCCACAACAGCACCACAGCATTCATCATCAGCAACAACAGCCACATCATCAACAACAACAGCCACATCATCCTGGGCATCCAGGACACCATGGTCAGTTGCATAGCCACCATGGTCAGCAGCAAACACCAAGTCCACATCATCATCCACCTCATATGCAGCAGCTTCAGGGAACACCACAACAACAGCTGCAGCAACATCAGTACAATGCACATCTTCCACATCATCAGCAGCAACCACAGCATCCACATCTTCATCCTCATGCGCCGGGACCACCTCCTGGTTCACATCACAACACTGTAGTTGGGCCAGCTGCAGCTGGTCATCCTCATCAGCTTCCACACCACCAACAACAGCCTGGTATGAGTTATCCAAATCAACAACATCCCCATCAaccgcagcagcagcaacaacaacaacagcaaccgCAAGATCACACTCTTACTGACATATCGAAAACCAACAACCTGCAGTTTGTCGACAGTTTTACGGAGTCGATTGATTATCTGCAACAGTCGTTTCAGTATGTGTAA
Protein Sequence: MQHNPQAHLFQIQVKSLIKTLKCLQSDDKYQALLFLISAIKLYVKFLYNDTQERIYKPSILKELNNIQNVIIANLLKSRNAVLAPSSLSTPVCELRSSVRNNIQEANSSDEVSLAHPGSKSLLPLISYELKGKLLRGGLFEDIPLVGAVKFKPRKRLGLISSFGNVQLNRSLVRLIASKNFKLFFNMFEQNIFPTWKIFKTDRPIRSRARPTMPAICYSGGSSHSPPAAYIKKEDFDFDPPYSLAGDDPCFEELKDDDDELLMLKEEDEEEDDSVSNEMFSEESSTNNTSLMLSSDTNTLDTNDSNMLSGERCKEQLYQCLLCDKSYRKRKSLVIHFSHHPGFCPDCGKQRGVTSEEIIEHNRVYHKNRPHICEHCGETFTRNQQYQVHMQGHFISKTRVQEQNCKKTYKFSCRTCGIVFNNQKYLEKHAQKTCHQTEGVACDTCGAIFSSDIKLYQHIARTHENEKRFTCEHCAKVFNQKANLDRHLLIHTNVSEKNYPCEQCSASYLSMTSLKEHIKIAHSADDKFECNICHKLFAAKRSLKRHKLCHSEERPFPCTVENCKEAYKNQSHLVRHMKTAHHIEPPTKRKTIKGEQGEFIPLDPIGTGDSNASKSNPLKKSVIGGGSDKSIGDSSTNFSDNLSSYNYDYVDTGVATVDSGQQRLQMLGPGVTRMSGSVAVNFNDPVIGYPGASTANESFEWQNLEFGGGSVNSVGNSSGPTQLNQLNQGFMDNSHVASSSSYMAAGVPGMRTYTDPNLICEHCDEANFLNSQQLQAHIQDHFTAKEGKEPSGKKLQRLYCKTCNLVFSTGPQLDRHIQKTNHHTDSIVCELCSAIFNSNLKVYQHMLKCHKNETWYACEQCSKVFILKQEYDKHQLVHQTVTDKSVICEHCASSFFSQEALKEHIKISHTVEKKYECNICNKLFAAKRSLKRHKLCHEEEGAFPCLVEDCKESFKTPTTLAKHKKLVHSIGPDPSEKTGGKGKVNTAAKAANDKLLPEPPPATGPSSNTSVLGLGPVPGTSVPIKLEPRTPGGMLVPPSRTSSTSSAGAGTNANTNPYDPYGAGIHYNNVMSSGQQPATHFAVQNPNNTLHYGTNATGSRTGSEQPMTYRMDPNASPSAPGPYSHGSAGGYGQMNSSFEWRNMELPNSIDPGMGTSSAGAGQTVQSVTAAMKANKYYPVMETSGASSGGFIQSQQSPHHLQQQQQLHQHHPQHPHHQQTQQQQQAQQHQVVTGAAVLQAKAPQESQQHHQQQMININSQEFMGYQEIWNANMVKMEYQDDVNNSNVSGSSYNNIGNILSNLELIGNNSNYEQSYDIVPPSASGGDAQHSQQQQTNQTSSQVPQIAPKNNYHKQHMHQQQQQQHQQPGMLNVENPMVVPHHHQQQQYFQEHHPQQHHSIHHQQQQPHHQQQQPHHPGHPGHHGQLHSHHGQQQTPSPHHHPPHMQQLQGTPQQQLQQHQYNAHLPHHQQQPQHPHLHPHAPGPPPGSHHNTVVGPAAAGHPHQLPHHQQQPGMSYPNQQHPHQPQQQQQQQQQPQDHTLTDISKTNNLQFVDSFTESIDYLQQSFQYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00949133;
90% Identity: -
80% Identity: -