Wsmi016619.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Wyeomyia smithii
Gene Symbol
ZBTB26
Assembly
GCA_029784165.1
Location
CM056644.1:206461652-206464464[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.01 1.1 11.5 0.2 2 23 238 260 237 260 0.96
2 16 0.19 21 7.5 1.1 1 23 295 318 295 318 0.97
3 16 0.0015 0.16 14.1 4.6 1 23 332 354 332 354 0.95
4 16 2.2 2.4e+02 4.2 0.1 2 23 370 392 369 392 0.88
5 16 0.023 2.5 10.4 0.6 2 23 429 450 428 450 0.97
6 16 0.00022 0.024 16.8 2.7 1 23 482 504 482 504 0.98
7 16 4.6e-05 0.0051 18.9 0.3 1 23 510 533 510 533 0.97
8 16 0.00088 0.096 14.9 1.1 3 22 541 560 539 563 0.90
9 16 0.0001 0.011 17.8 0.1 1 22 569 590 569 590 0.94
10 16 0.19 20 7.5 0.6 2 23 631 652 630 652 0.87
11 16 0.033 3.6 9.9 5.9 3 23 660 680 658 680 0.97
12 16 3.3e-07 3.6e-05 25.7 0.8 1 23 687 709 687 709 0.98
13 16 6.8e-05 0.0074 18.4 1.5 1 23 715 737 715 737 0.99
14 16 0.00016 0.018 17.2 0.7 1 23 768 790 768 790 0.99
15 16 1.1e-05 0.0012 20.9 0.5 1 23 796 818 796 818 0.99
16 16 0.0023 0.25 13.6 0.1 1 21 824 844 824 845 0.94

Sequence Information

Coding Sequence
ATGCTTCTTCGCCATGTCATCCCTACTAATAACGATGTGGAAGAAATCTACATTGTTAAGCAAGAGGAAGACCCAAACGAGATAAATGTTAATCCTCTTTCATCTGCTGGGGCCAGCCGACCTGGTGGACTGCTTCCAACAGCTTTACTTGAGAACGAAGATGTTGAAATTAAGGACGAACCATTGAGTGTTCATGGTAGTGATGAAGAATACGATACTGACGAGCAGAAGTTCGATCCTCCGACGCCTATGTTTCATGCACTGCCTGTGGAGGTGAAGCTCGTCGAGGATCTTCCTAAAAAACTAGAAGCTATAAAAAAAGAGCCATTAGAATTATGGAACTTAGCTCAAACATTGCAGTATCATCAAAAATCGCAATCTGCAACGTCGCAATCTGTTTTTAGGTCTGCAGTAAAATCCGAGGAAGAAAATCAGGATTGGGCTCGATTTGACGACATTCCGCTTGCCAGACGTCTTGCAAAAGAAAAGGCTAAACGACGACGTAAGAGGAAATTATCAgccaaaaatgaaacaaaatcggAATCCAGTGCAAATGGAGATTTTCAGGACGATTATGACGACGATGATTACAAACCTCCCCAATTAGAAGAGATTAAAGCAGAAAAAAAGGAGAAGAAAAAGCGTCTCAAAAAAGTAAAATCAGAGCTTGAGAAAAATGGAAGTGAAGATACAGATGAAGATGATATactcaaatgttttatttgtgttACCGATTATAACGAATCATGGGCGTTAATCAAACATATGAGACGCGAACATAAACAAATGCTTCCTTTCAAATGTAACGTGTGCGTGTCTCGTGAAATCAAGAAATTGAAGGAGTTGAATTTGCACTTCCGTCAACACGATGAAACTCGGAAGCATAAATGCATGTATTGTGCTGCGCGGTTTCCTTCAGCACAGGGCCAGAGTAGTCATATGCGGCGAATGCATAGTGAAAAGTACAATGCGGACATGGAAAGGAATCGTCGCTTTCTTTGTCGGTTTTGCGATAAAAAGTTTACTAAGAAACATGATCTTGAAGTTCATGAGAAACGTCATCTAAAAGCGCAGTCGAACGATGCTCAGTTCCTTAAACGTGAGCTCAAATGCTACATTTGTAATGAATTTGTTGGCAAATCGAGAGATGATCTGAATGCCCATATTGTGCAACATAGCAGAGAGTGGCTTCCGTATTACTGTCAAAAATGcgacaataaaaaaattactactGTACGTGTACTATGCGAACACTTACGACAGCACGAAGAAGGTTTGGCGGTAAAATGTGTTTATTGTGACGAGCGGTTTGTAACTTTAGCTGATTGTCAAGCACACGAGAGGAGCCACACTGCCGAAAAAGAAGCGGAtgagattttagatgctaagaTTATAGCTGAAACACACAATGCTAATGTAGCTGTTGTCGATGGTCTGAAACGGTTTCAGTGCGATCGATGTGATAGAACATACACCTTATTTAGTAGCCttcgaaaacatcaaaatttgcATACTAAAAGCAACGCTTTCATTTGCACTAAATGTGGCAGAGCGTTTATCAAAGCCTCATCTTTAGCACTTCATGAGCGTAGAAACCATGATGAAAAGGCCAATTTTGGCTGCGAAGGTTGTGGAAAAACCTTTCGAACAATTGGCCATTTATTGGATCATAGAACGCGAACCCAACATTATGCTGGAAGACCTTATATATGTGAAGGTTGCACAAAAACTTTCCGCTTACCAGATGAGCTCAAACAGCATCAGGAAACTTGTTCTGAAACAGAGGCAAACCGTCCATGTTTTTGCGgattatgcagtgaaaatttcgcTTCTTTGGCTATTGCATTAGATCATGTCAAAGCAGATCATGATCCTGAAATTCCCGAAACAAAATGTCGCTATTGTGATTTGACGTTTCGGGATGCTGAGCGTATTGTTGAACATGAATTTCGGCACACATTGCCTGGAATAATGGCTTGTACGAtgtgtaatcggattttcaagCATCTAAAAAATCTGCAATGTCATATGAAAAATCATGGAAAGGTAGCTATTCCCTTCATGTGCGATATATGTGGAAAAACATTCACCCAAAAGGGTACACTCACCATTCATACCCGATTACATACAGGTGAACGCCCGTACACGTGTCAACTTTGTCAAAAAGGATTCGTTGATAAAAATGAAATGCGTCGTCATTACAATATGCATTTTAATCCTCAGAGCAAATTGTTCATACCAAATGCAGAACAAATTGCTGCTCCCGTTGATATCGGAGCTCAGGGCAAAAAATACAAGCAATATACCTGTAAGATTTGTAGTCGTCAACTAACCACTTCTACTGCATTAGCTAAGCACATAACGACACACACAGGAGAGAAGAAATATCAATGCGACTTTTGCGATAAACGATTCGCTCAAGGTGGCCAACTAACAGTGCATCGACGTATCCACACTGGAGAGCGTCCATTTGCCTGCGAAATTTGCGGCCAACGATTTGTCGGTGGTAGCAATTATAAGCGACACGTTAAACAAGGACTCTGCAAAACTTCTGCAGTCGATGTAGATTTGGCCATACCAGTACCGGTTGCTGGCGAAATGATGACGGATGAAGAGCAGGTTTTCCCCGTTGACTAG
Protein Sequence
MLLRHVIPTNNDVEEIYIVKQEEDPNEINVNPLSSAGASRPGGLLPTALLENEDVEIKDEPLSVHGSDEEYDTDEQKFDPPTPMFHALPVEVKLVEDLPKKLEAIKKEPLELWNLAQTLQYHQKSQSATSQSVFRSAVKSEEENQDWARFDDIPLARRLAKEKAKRRRKRKLSAKNETKSESSANGDFQDDYDDDDYKPPQLEEIKAEKKEKKKRLKKVKSELEKNGSEDTDEDDILKCFICVTDYNESWALIKHMRREHKQMLPFKCNVCVSREIKKLKELNLHFRQHDETRKHKCMYCAARFPSAQGQSSHMRRMHSEKYNADMERNRRFLCRFCDKKFTKKHDLEVHEKRHLKAQSNDAQFLKRELKCYICNEFVGKSRDDLNAHIVQHSREWLPYYCQKCDNKKITTVRVLCEHLRQHEEGLAVKCVYCDERFVTLADCQAHERSHTAEKEADEILDAKIIAETHNANVAVVDGLKRFQCDRCDRTYTLFSSLRKHQNLHTKSNAFICTKCGRAFIKASSLALHERRNHDEKANFGCEGCGKTFRTIGHLLDHRTRTQHYAGRPYICEGCTKTFRLPDELKQHQETCSETEANRPCFCGLCSENFASLAIALDHVKADHDPEIPETKCRYCDLTFRDAERIVEHEFRHTLPGIMACTMCNRIFKHLKNLQCHMKNHGKVAIPFMCDICGKTFTQKGTLTIHTRLHTGERPYTCQLCQKGFVDKNEMRRHYNMHFNPQSKLFIPNAEQIAAPVDIGAQGKKYKQYTCKICSRQLTTSTALAKHITTHTGEKKYQCDFCDKRFAQGGQLTVHRRIHTGERPFACEICGQRFVGGSNYKRHVKQGLCKTSAVDVDLAIPVPVAGEMMTDEEQVFPVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00949080;
90% Identity
-
80% Identity
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