Wsmi015006.1
Basic Information
- Insect
- Wyeomyia smithii
- Gene Symbol
- Mblk-1
- Assembly
- GCA_029784165.1
- Location
- CM056644.1:183884238-183888453[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-16 9.1e-14 52.6 0.0 1 45 66 111 66 111 0.98 2 2 1.2e-17 4.6e-15 56.8 0.0 1 43 552 595 552 597 0.95
Sequence Information
- Coding Sequence
- ATGTCGATGCTTCATCGCCCCACCATTCCGCCAATCGGCATTCTCGTCATCATCGTCTATTGTGTCCAATTTCAGCAATTTGTAGCCGGACAACCTAATCTTGCCCGATCTCATCATTCCATCCGTCGACAGGACAAGACCCAGCCCCGGCGgccaAAACCGCGCCTCTCGCCGATTGGTGGCCGTCGAACTTACACCGAGGATGAGCTGCAGAGTGCTCTACAGGATATACTAAACGGTAAGCTTGGTACGCGCCGGGCAGCCGTCCAGTACGGAATACCCCGGTCAACACTGCGCAATAAGGTCTACAAACTGGCGATGGAGCACAAGCGGGAAATGCTGCACAACATGTCGCTGGCGGCGCTGgtggacgacgacgacgataagGATTCGCTAGAGGACGAAGGCAAAGACGATAGCTACTCGATGAAGCTCAATCAGCAAGCGTTTGCCGAAGCGTATCTACGAATGTACCGAGGCAGCAGTAGCACTCCGAAGCTGGAACCCAGCTCGAACCCGGCAACTCCACCCCAGCAACAGCGAACGCCGGAGCCACCACTGCTGAAACCGATACAATCCCAAACACCTCAACCGACGGTTCCACCTCAATCATCTCCGCTGGCAGCGGCAGCAAACAGTCTAATCGATCCGAGTTTGCTACTACAGCTGCAGAGCCTACTGCTGGCAGGAGGCATTCCCGGTTTAACCAATACGGCAGCACAATCCAATAGCCCCGAGGAAGCGGCAGCAGCCCAAGCGGCACTTGCTGCCTTGCCTGAGTTGTTGAAAAAAGTCATCCAGCAGCAGGAATTGATCGCCGAACAGATCAAgaaagccaccagcagtgaaCCGAGGCCCAGTGCCGTTACACCGACAATGAACAATGGCCAACCGATCGATCCTCGGCTGTTGCCGTTTCTGCAAGCACAGCAGCATAGCAAACCTCGAACGGCTTCCGGCACACCGGAGACAACCTCTTCGCTGGATCTGAACGATGGCGGAAGTGATGACTCGCAAGTTATATTGAAGATTCCGTCCTACAAGCCAGTTCCAGGCAGTACTCCGACAATGCCATCGGTCGCAGCCGCAGCTCTTCTTGTGGGCAGCAAGAACGGTGATCATCATAGTCTTTCAACTCCCTCCCCGCCAACTGCCGCCGCTTCAGTCGCCGCCGCAACGGTCCGGGATCTCAGCAGTCTGGTAGGAGCACCAGGCCCTAGTACCACCAGCAACAGTTCTCGACCAGTACATAACGCTAGTCCGCAACAGCCCCCACAGCAGAACCCTGCCCAAGCACCGAACCATCTCTCGGTCATATCGCCTCCTATGGGCATTAGGCCCCGAAGCAGTTCTCAATCACCTCCCAACTCGCTGCTTGGCGCCAAATCAATGCTATCGATCAACGATGTGATCGCGAGGAGCATTAGCAAAAACTTCCAACAGCATCACCAGTCCGATCTGCTCAAGCAGCAGATGGAATCGATGGAACAGTACAAACGGCCAACCATCTCGGTCATCAAGAATCTGGGTGGAACGGACATTTCCCGTTTCGGTAGTAATCCCAACATTACACAAATGACCGCAGCACAGCTTGCCAACACCGGCACCGGAGGTAAAGGAACTCGGCCGAAGCGAGGCAAATACCGGAACTACGACCGGGACAGCCTAGTGGAAGCGGTGAAAGCCGTGCAGCGGGGTGAAATGTCCGTACATCGTGCCGGAAGCTACTACGGTGTTCCACATTCCACGCTGGAGTACAAAGTGAAGGAGCGTCATCTGATGCGACCGAGAAAACGGGAACCAAAACCCCAACCTGGTCTGGATGGGCTGAAATCGGACCTAGGAGCCGGCAGCTCCGTGATGAGAACGCTGGATAAAAGTAAAAGTTTAGCTGGTCTCGGACCTAGTTccaagcagcagcaacagcaacagttGAAGAATCAATATGCTAGCGCTTCACCGAACGGAGGACTAAAGATGCCGATGTTCGATCCAGCGATGGCTTCCCAACTACCCTATGCATCACCTTTCCTCTGGCCCCATCCAGCCGGTTTCTCCAATCTTCCGATGGACTTTGCGCGACAGTCAGCCGGATCGGGCGCGGGTTCGAGTGGCCCCTCTAGCGATAACATATTCGCTTCACCGATGATGCAAAGGTTTCAACAggagcaacaacaacaacaacagagcAGTAAAGTACCCAACAGTAGCGGAACGAGTGCACCGAAAACGGCCCGTGAATTAGCGGAAAGTATATACGACGGTACAAGTACAAACGGTTCGCTGCTGGACGATATCATTCGGCACAGCTTGGACAAGAAACCGGGCGAAATGCCACACGGGGCTTTGTTCGATCAGCTGATGAAGTCTAATTTACGAACAACGAGCTCCGCTTCCGACGATCCTTCGGCGGCTCTTCTTGCCAGGGTTGGGGCAAAACGCAGTGCTACCAGTCCGCTCAACTACCTGCCAGACAACATCAAGCGGGAACGCGCTAGTCCTGGTGCGTCGTCCACCTCATCGACGGGTAGCAGTAAACCGGCCGGACTCGGTTCTGTTAGCTTCAATGACCAccatcatcaccaccaccagcagcagcaacagcaacaacaacaacagcttcatctccagcaacagcagcagcagcagcagcgacaCTTGAATACCTCCACCGATAGTATGCTCGACACTCATCGAGCGGAATTGTTGGCCAAAGGAAACCTAGCCGTCGAGAACCTCATAAAGCTACGTGAGGATCTCACATCGATGTCCGTGGCGCACCATCACAAGCGGACACCAATGGAAGATCAACACAATGGTGCTAAGGACGATCTGTCCGGTCGGAtcgaccagcagcagcagcagccgccgCAGCTGCTGTCACACCGGCTCGCTTCTGTCAAGCTGCCGACCGAGGACAGTTCATAG
- Protein Sequence
- MSMLHRPTIPPIGILVIIVYCVQFQQFVAGQPNLARSHHSIRRQDKTQPRRPKPRLSPIGGRRTYTEDELQSALQDILNGKLGTRRAAVQYGIPRSTLRNKVYKLAMEHKREMLHNMSLAALVDDDDDKDSLEDEGKDDSYSMKLNQQAFAEAYLRMYRGSSSTPKLEPSSNPATPPQQQRTPEPPLLKPIQSQTPQPTVPPQSSPLAAAANSLIDPSLLLQLQSLLLAGGIPGLTNTAAQSNSPEEAAAAQAALAALPELLKKVIQQQELIAEQIKKATSSEPRPSAVTPTMNNGQPIDPRLLPFLQAQQHSKPRTASGTPETTSSLDLNDGGSDDSQVILKIPSYKPVPGSTPTMPSVAAAALLVGSKNGDHHSLSTPSPPTAAASVAAATVRDLSSLVGAPGPSTTSNSSRPVHNASPQQPPQQNPAQAPNHLSVISPPMGIRPRSSSQSPPNSLLGAKSMLSINDVIARSISKNFQQHHQSDLLKQQMESMEQYKRPTISVIKNLGGTDISRFGSNPNITQMTAAQLANTGTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGLKSDLGAGSSVMRTLDKSKSLAGLGPSSKQQQQQQLKNQYASASPNGGLKMPMFDPAMASQLPYASPFLWPHPAGFSNLPMDFARQSAGSGAGSSGPSSDNIFASPMMQRFQQEQQQQQQSSKVPNSSGTSAPKTARELAESIYDGTSTNGSLLDDIIRHSLDKKPGEMPHGALFDQLMKSNLRTTSSASDDPSAALLARVGAKRSATSPLNYLPDNIKRERASPGASSTSSTGSSKPAGLGSVSFNDHHHHHHQQQQQQQQQQLHLQQQQQQQQRHLNTSTDSMLDTHRAELLAKGNLAVENLIKLREDLTSMSVAHHHKRTPMEDQHNGAKDDLSGRIDQQQQQPPQLLSHRLASVKLPTEDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01461803; iTF_01471274; iTF_00948661;
- 90% Identity
- -
- 80% Identity
- -