Wsmi020406.1
Basic Information
- Insect
- Wyeomyia smithii
- Gene Symbol
- retn
- Assembly
- GCA_029784165.1
- Location
- CM056645.1:58393909-58429890[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.13 1.1e+03 1.8 0.1 35 58 32 54 27 59 0.77 2 2 3.3e-21 2.9e-17 64.6 0.0 2 80 63 139 62 140 0.94
Sequence Information
- Coding Sequence
- ATGAATGAAGTGCCTGCTGCCGCCGCTTCGTTACGCTCCGCTCCGCTCGCTACGACCGGGCACTTGCCAATCTTGCCGAGGATGGTCGTAAAAAAACTTTGGGAGGCGGTGCAAAAATTCTTCAAAGGTTACGAGGTGCACCTCGCTGGCTGGCCACATCTCTACGAAATCAACGATGATCCCAAACGGAAAGAGTTCCTGGATGATTTGTTTCTTTTTATGCAGAAACGAGGAACTCCGATCAACCGTCTGCCCATCATGGCCAAATCCGTGCTGGATCTGTATGAGCTGTATAATCTGGTTATAGCCCGCGGTGGGCTGGTGGACGTGATCAACAAGAAACTGTGGCAGGAAATTATCAAAGGGCTGCATCTCCCGTCCAGCATCACAAGCGCCGCCTTCACGCTTCGAACACACACGCATGGGAAAGATGGCGTCATTCGCGAGCAGCAATGCGCCGGCCGCGGCGTTGTCCCAGGAGGACGCTCTCCAGCATGGCTAACGAATGCTACTTCATCGGTGCAGCAGTCTTTTCGAATGAAAAATGGCGCTGCTGCAAGCTGA
- Protein Sequence
- MNEVPAAAASLRSAPLATTGHLPILPRMVVKKLWEAVQKFFKGYEVHLAGWPHLYEINDDPKRKEFLDDLFLFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTHTHGKDGVIREQQCAGRGVVPGGRSPAWLTNATSSVQQSFRMKNGAAAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -