Wpum012050.1
Basic Information
- Insect
- Wiebesia pumilae
- Gene Symbol
- nfxl1
- Assembly
- GCA_018907045.1
- Location
- JACCHZ010000088.1:1373099-1375917[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 5.2e+04 -5.0 1.9 15 19 123 127 123 127 0.85 2 18 0.35 9.2e+03 -1.7 0.4 4 10 158 164 158 164 0.91 3 18 1.2e-08 0.0003 22.2 16.7 1 19 172 189 172 189 0.99 4 18 1.5 4e+04 -3.7 0.6 6 10 215 219 214 219 0.86 5 18 1.9e-06 0.048 15.2 13.9 3 19 227 243 226 243 0.93 6 18 0.00081 21 6.7 8.5 1 19 278 297 278 297 0.90 7 18 1.2 3e+04 -3.4 0.8 6 10 300 304 299 305 0.83 8 18 9.2e-05 2.4 9.7 8.3 1 18 333 350 333 351 0.97 9 18 0.0068 1.8e+02 3.8 7.6 1 12 385 396 385 396 0.94 10 18 1.2 3.1e+04 -3.4 1.7 6 10 406 410 406 410 0.97 11 18 8.7e-08 0.0022 19.4 14.6 1 19 416 434 416 434 0.93 12 18 0.00071 18 6.9 7.6 9 19 482 492 480 492 0.90 13 18 0.00037 9.7 7.8 5.8 1 12 502 512 502 512 0.95 14 18 1.4 3.7e+04 -3.6 3.7 14 19 543 548 543 548 0.89 15 18 0.00016 4.1 9.0 7.2 1 12 584 595 578 595 0.91 16 18 0.87 2.3e+04 -3.0 1.1 6 10 611 615 610 615 0.95 17 18 9.3e-05 2.4 9.7 13.4 3 19 624 640 623 640 0.91 18 18 2.1e-06 0.055 15.0 9.9 1 16 685 699 685 704 0.95
Sequence Information
- Coding Sequence
- ATGAAGAAGTTTAGAAAAGCCCAAGCCCAAATTCAAGCGTCCATTGAAAAACATTTAGAAGCAAATACCATTGAATCTTCTAGTAGCGAGGATGAAGATGAAAACTTACTGAAAACAGTACTGGAGAAAGTTTTATCTAATTATCAATCTGAAGGTGGTGATATTAATAAAACCTTATCATATTTAATTGAAACTTTCCAGTCTGGTGGAGCAGTTTGTTTGATATGTATTTCTTCAGTAAAAAAAGTTGATCCAATTTGGAGCTGTACTGAATGCTATTCTTTTTTGCATTTGCCTTGCATTCAACATTGGGTGAGAGATAGTATAAGATATAAACATGAAAAAGGAATTATGCCTTCATGGGGCTGTCCAAAATGCAGAGCAGAATATTGGGAAGATCAAATACCAAGAAAATATATATGTTTTTGTGGAAAAGTTGAAGATCCACCTTATCAACCATGGTCAATTCCCCATTCTTGCGGAAATATCTGTGAAAAACTTTTGCAACCAAAATGTGGTCATAAATGCATGCTTTTATGTCATCCAGGGCCATGTCCTCCATGTCCAAAAATGGTAGCAATTACATGTTTTTGTGGGAAACAAATACCTTGTCCTCGAAGATGTAATGCCAAAGAGTGGTCCTGTAGTAAAATTTGTGATAAAAAGTATATGATTTGTGAACATAGTTGCATAGAGAAGTGTCATCCAGGTATCTGTCCACCTTGTTCAAAAAAGATACTTAGTGCCTGTAATTGCAAAAATAAATCTGAGTTACGAAACTGTAATGAGAAGGTTTGGTTGTGTGACAAACTTTGTGAAAGATTCTTTTCTTGTAATGTTCATATTTGTAAAGAGTTTTGTCATAAACAGGGAGATTGTAATATATGTCCATTAGAATGCAATAGAACTTGTCCATGTGGTAAAAAGAAACATGCAGTATCATGTAAGCAACAACAAGTACCAACATGTGGAGACACTTGTGGTAAATTATTAAATTGTGGAGCTCATTATTGTAACATGAGATGCCATGCAGAACGTTGCGGTCAATGTTTAGAAGTTGTAAATAAAACTTGCCGTTGTGGAAGTTTTAGTAAAGAACTTGCTTGTGTAAAAGAATTTCACTGCAATAAAAAATGTTCACAAATGAGACTTTGTGGTAGACACCTATGTAATAAAAAGTGTTGTGACTGTTTATTAAAAAATCATTTTAATGTTTGTGAAAAAGTATGTGATAATACATTAAACTGCCGTAAGCATAAGTGTTCTGCTCCCTGTCACAGCGGACCTTGTTATCCATGCCCTTGTACTGTCATCATTCAGTGTCGCTGTGGTAATAGTAAAATTACAGTTCCTTGTGGAATGGTTAAAAAAATCAAACCTCCAAATTGCAATAAAATGTGTAAAATACCACCTATCTGTCATCATTCTAAAAGAGAATCACATAAGTGTCATCAAGGTGTTTGTCCACCTTGTCGTAAGGTTTGTGGATTAACACATAAAAGGTGTGGTCATACTTGTCCAATGCTTTGTCACACTAAAGTTTGGACAAAAGTTAAACCAGATGGAGTTTCTAAACCAGTTGGACCATGGGAAAATCAAAAAGAAAGATGGGAGTATAAATCTTTTCCATGTTCTCCTTGTAAAATATCTGTTATGGTAACATGTTTAGGAGGACATGAAACACTACCACTGCCTTGTTACAAAGCTGTTTCAAAATCTTGTTTTAGAGAATGTGGGCAATTGTTATCATGTACAAATCACAATTGTGAAAAGCTTTGTCATAAGCTACAATTACTTAGTAATATTAATATTGATGAAAAATGTATGGTGTGTGAAAAACTATGTATTTTATCAAGACCCAAAGGTTGTACACATGCTTGTTCAAAGCTATGCCATCCTGCTCCATGTGAACCATGTACACAACTTGTAAAAGTTCCTTGTCTCTGTGGTATTAACACTCTTTATATACGCTGTGCTCAGCTTACTTCTGCTACTTCTGAGATGCGTAACAAACTTTTACTGTGTGGAAATCAGTGTCCTCAAAATTATTCATGTGGTCATCGATGTATTGACAACTGTCATGCTGGACCATGTCAGAAAGCTGAGTTTTGTAATAAGAAAGTTAAAATATTATGTAAATGTAAGCGAATAAAAAAGGATTTTCCTTGTATCTTAGTACAAACTGGAAAAGCTATTGTAGATTGTGATGAAATTTGTCAGAAAAAAAAAGAAGAGTTTAACAGAATTCGAGAGATTGAACAAGAAAAGAAACGAAAAGAGGAAGAATTAAGAAATCAAAAAGAAATTGAGTTGTTTGAAAAGAAATTCAAATCTAAAAGGAGAGGAAAAGACCGTTATCATAATAAAAAACAATCAAATGAGAGAAAAACTTCCTATAAGTGGATGTGGATAACTTCACTGTTTGTTATTGGAATTTCTATAACAGTGATACTACTGTTTCAAATGAATAATAAATCATTTTAA
- Protein Sequence
- MKKFRKAQAQIQASIEKHLEANTIESSSSEDEDENLLKTVLEKVLSNYQSEGGDINKTLSYLIETFQSGGAVCLICISSVKKVDPIWSCTECYSFLHLPCIQHWVRDSIRYKHEKGIMPSWGCPKCRAEYWEDQIPRKYICFCGKVEDPPYQPWSIPHSCGNICEKLLQPKCGHKCMLLCHPGPCPPCPKMVAITCFCGKQIPCPRRCNAKEWSCSKICDKKYMICEHSCIEKCHPGICPPCSKKILSACNCKNKSELRNCNEKVWLCDKLCERFFSCNVHICKEFCHKQGDCNICPLECNRTCPCGKKKHAVSCKQQQVPTCGDTCGKLLNCGAHYCNMRCHAERCGQCLEVVNKTCRCGSFSKELACVKEFHCNKKCSQMRLCGRHLCNKKCCDCLLKNHFNVCEKVCDNTLNCRKHKCSAPCHSGPCYPCPCTVIIQCRCGNSKITVPCGMVKKIKPPNCNKMCKIPPICHHSKRESHKCHQGVCPPCRKVCGLTHKRCGHTCPMLCHTKVWTKVKPDGVSKPVGPWENQKERWEYKSFPCSPCKISVMVTCLGGHETLPLPCYKAVSKSCFRECGQLLSCTNHNCEKLCHKLQLLSNINIDEKCMVCEKLCILSRPKGCTHACSKLCHPAPCEPCTQLVKVPCLCGINTLYIRCAQLTSATSEMRNKLLLCGNQCPQNYSCGHRCIDNCHAGPCQKAEFCNKKVKILCKCKRIKKDFPCILVQTGKAIVDCDEICQKKKEEFNRIREIEQEKKRKEEELRNQKEIELFEKKFKSKRRGKDRYHNKKQSNERKTSYKWMWITSLFVIGISITVILLFQMNNKSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -