Basic Information

Gene Symbol
-
Assembly
GCA_018907045.1
Location
JACCHZ010000116.1:2375152-2395647[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.002 0.5 12.4 0.1 1 23 1323 1346 1323 1346 0.96
2 12 0.00015 0.039 15.9 0.3 2 23 1372 1393 1371 1393 0.97
3 12 0.012 3.2 9.9 1.9 3 22 1541 1560 1540 1560 0.97
4 12 0.78 2e+02 4.2 0.2 3 23 1581 1601 1579 1601 0.96
5 12 0.38 96 5.2 1.1 1 20 1679 1698 1679 1700 0.94
6 12 0.58 1.5e+02 4.6 1.7 2 19 1726 1743 1725 1744 0.95
7 12 0.021 5.5 9.1 0.2 1 23 1769 1792 1769 1792 0.97
8 12 0.01 2.6 10.1 0.3 1 23 1844 1866 1844 1866 0.97
9 12 0.0093 2.4 10.3 0.2 3 23 2166 2186 2165 2186 0.96
10 12 2.8 7.2e+02 2.4 6.9 2 23 2534 2556 2533 2556 0.93
11 12 0.05 13 7.9 0.1 1 23 2566 2591 2566 2591 0.94
12 12 9.8e-05 0.025 16.5 0.9 1 23 2593 2615 2593 2615 0.97

Sequence Information

Coding Sequence
ATGGAGCTATTAAATGAAACAGAATGTAATACCATTAGCGATGACAAAAAAAAAAAGCAAAATACTTTGCTTGAAGAAAATAAACAAAAATTTATTTTAAAGAAAAAATTTTATAATACAGTGTTTGCAACTAAAATGAGAAATAGAAGGAAAGAAGAAAAATTCGAAAAACTCGAAAAACTTGAAATTAAAGAAGTTTTGACTACTTGTAAACCAGTTTCTGTAGATGTAACTCGCCTTTCTTCAAACATTGTGCCTAAAGTAATACCCTCAATAGAGCATAAAAATCGCAGAAAGAAAAAGTTTCAATGGAAGTTAGGTAAAACTAAAAAGAAAAAGAAAATACGCGATAAAGCAGGAAAAATAATAAAAGCGAATACAAAAGATATTAATGAGAAAAACCATCGAAGTGAGAATAATGTTGATGAAACTTGTTTAAAAACAAAAGAGAAATTAGCAGTTATACAGAAGCTTAATGGAGATAAATTAGAGTTTCCAGGGGATAACGATGATATTCAAAGAAGAAAGAGTATTAGACATGTTACACCTATGATGTTCTTTGATGAAAAGTGGGATTTTGAAACTAAGGCAGATAATGGACCTATCCCAGAAGAAAAGTTTAGTTGCAGACGAACTGAATTGTTTATAGGCAAATTAAACACTAGAGAAGCTAGGATTTTAAATATTGAAAAAATATTAAGAGAAGAAAATAAACCAACCAGTCAAAATAATAATCTTGTTGATAATCATGACAAAGATGTATTAGAAAAATCTGAAAATAAGGTAGATGAATCAGTTCTGAATTCAATTTCTAATTCAGTGTTTGAAATTAATAAGAATGTGGAAAATAATAATAGTATAAAAACTTGTATAAGTATAGAAAGTAGTAAAAATTTAGAAAATAGTAGTAAGGAAGATCATCAAAATAAAGATATAGGGCAAAGTATAGTAGATACTTTGAAAAATGTAGAAATGAAAGCAGTTATCCAAGAATCAAGTAACTTATCAAAAGAAATTGAAACCAAAGAACATGTTAAAGATGAAGAAGCAACTTGTAGGCGTACAGTTCCATTTGTAGGCAAAATTTCTCAAAATGTTTCACCTGGAATATCTGAACGATCAACAGAAATAGATTTTATTAAAAGTAATGTGAAAACCAAATCAGATTCTTCTAAAAATATGAAAGCATCAAATTCTTCAGATGATGTAAGTGTAAAATTAATTTCTTCCAAAGATGAGGATATAAAAACTAGTTCTTCAAGTGATTTATATACAGAATTAAATAGTTCAACTAATAATGTAAAATCACAACTTGATATGGTATTAAAAGATGAAAATAAATTAAATTGCTCAATGCAAGATGTTAATATAAAGTTAGATTCTTCCAATGAAACAGATGTTAAAGAAAATTTATGTAACAATGTAAAATTAGATCATTTATCGAGTAATGTAAGTATGAAATTAGAGGAATCTTTAATTAGTGAAGCTAAAAAAGAAATTTGGAGCTGCCGAAGAATAGAACCTTATTTGGGTAAAGATTATCCGCATTGTAGTAGAACATTACCTTTTATATATTCAGTGAATAAAGTGAAGTCTCTAAATATATCAGGCTCTAGTACAATATCAAATGATATTTTATTGTCTGAAACAGTCACAAAACGATTACATCAAGATAAATCTGATCAACTAATGGCTTTAAACAAAGCTAAAAATACAAACATTCCAGAGAATCAAGAAAATGAATTGATTAATTCAGTTATCGATAGTGCTGTTAATATTGATAATAATATATCTGACACATCGGTACAAAACGTAGAATGGAAATTTAGAAGAAAACGTCTCAAGATAAATTTAGATAAAGAACAGGAAGAAGTACGTCCCTCTAAAAAGTGTAAAGTAAAATCATCTTCGGAATCAAAACCACTTATAAATAAAAAATCTATAATCACTTCTGCATCTCCAGAAAAGACAATTTGTTCTCTATTCTCTCTGAATTGTACGAAACATATCCACCATTCTTATAACAACGAAAGTCCTATTCCTCACAAAAATATAATGCAGGACGTTTTTGTCTTACTAACCAAATTAGAGTACATCAGTGATCCATTAGTTATTGAGTATTTCAAGAAGATTGGCTTTACCAATAAACTTAAAAAGAACTTACCTTCATCCAAAAAAAATAAAGCTGACAGTGATAAAGCAAAAGTGAATTTAAGTGGACGAAAACGACTTGTTTCCCGTGAAAATGATCCAGCAGCGAAAGATCATTTTTTCAGCATTAATGCACCACGTACGAATTTTGATTCAAATTCTAATAATGTTCAAACCACAAATATGAAGAAAGTTCAAGACGAAGACAATCGACAAAGTGAATCCGAAAGAAGCATTAGTCCACCTTTGACCAGACCTAAAACTAGATCAAAGAGAAGACCCCTCAGTAGATCCTCTACAGAGTCGCTGAATATTATACACAGTAAGAGAAAGAAGCGTCCTGTCAATTATGTAGAAAACTTTAGTGACTCAGATTCAACCGAATCCAGCTTATCTGCCTTGAAACACTCCAAAGCACATTTAAAGAATCGACGGCTGACGTTGCGCGATCGCCAAAAACTAAGAACCTTCAGCAACCACGAAATTGATGAAAACGACATGGAGGTAGAGGAGTTTACTCGAATTGGTTTAAGAAACAGTACTCAAAGTAAAGGGTATGGCAACAGAAATATAATCACCTCGAGCAGTACATCGCGAAGCCATGGAGCCGAAGATTCTGATACTTTTAATGACAATGTTTCGTCTCGTACTGCAAGCGTTGTTCAGAACATCGAGGGGGCACCAAGTGTTCAATCGATCGATAAGAACTCGAGTATAAACTTAGCAAATGAAATGAGAGACAAAGTTCCTAATGAACGGTTTCAAGTTCTCGAAGAAATAGAAAAAACTGTGGAAGAAACCTCGCTAAATCCCTTACGGCTTAGACAACGTAATCAGGGATCAGGTGTCGGACAGCTCAAAAATTTTCAATATACAGAAATGACCAACAACAATATCAATACAAAGCAGCAAGTATTTAGTCGTAATGCACGAACACCGAACTTGGATCTCGAAGTTTCAAGTGAACAAATTCTTTTGATGACTAAAACTTCAAACAATAGCGATGGCCTTATTATGATGGGAAAAAAGTCCAAAGTGTCCAGAATCGATGAATTCGCTGGTAATCTCAGGAAAGCTTCGAGTATTTCTTCTCGAAGTGAGAAGGATAACTCCCGTATTAACGGCAGCAAACCCAAATTAAATTTCGATCACTCGTCCACCATTAAGCAAACAGCTAAAATCATGCAACTTACGAATCTCAAGGTTCAACTTATAAAATTAGAAACTGTGTGTGATAGTTTCAAGGATTATTCAGCTAGTGAAATAGAGCTATTAACCAGAAAATACATTGATCTGTTGATGAATTCAAATTTTACCTGTGATACCTGGCGAAATCCCATTAACTATCATCGATCTGAAGGCTTTACCGAGAAGCACATCGAGCAGGTCGATAATTCCGATTGTGTATCAGACGTTGAATCACAAGAAGAAAGCGAAGAGTTGCTTGAGGATATAGAAACTGAAGATGCCAATAATACTTCTCGAATAAAACCAGTTATCGAAGACGGTGTTAATAAGCTAATAGTTAAAACTTCAAAGCAAATTGAAACTAAGCTTTCATCATTCACGACCTTAGAGTCTGCAATAGCGACTCTTGTTGATGCGGAACCTGGCGAACAGCGGAATTTTGGAGCTGTTAATATTTCGGAAGCTCTGATCAGTCCATCTAGTAGTAGAATGGAGAAGGAGAAGGAGCAGACGGTACAACTAAATAATGACAAACTTAATAATGAGAATCACGAACAGTTAGAGACAAATGATAAGCAACAGTCAACGAAGAGTTCTAGTACAATTCTAGTAAATGGCACGACGATGTACCCTTGCCCAGCTTGCAACAAGATATTTGTTGTTGAAAATTCGCTCAAACAACATCAAACTATTGATCATAAAGTTACCGGCAGTTCAGCCTCGAAAAAGTCAGTATCGAAGTGTAAGAGAAAATTTAGATATTCCGAGAGTCTCAAATGTACAATATGCTCGGTGACATTCGATACAAGGGAGTTACTTTTTGATCATATAATGACGCACAATGAGCAAGAGCTACAGGAGGCATACAAAACAGCTAAGGCTAAAGCAAAACAACAAAGTGAGGGATCCAACAGCATGTCTGAAGAGTCGGATAAAGATCTGCATCAAGAAGCCACGCAGGTTAGTACGACTAATAAAAAGAAGAGCAAGGAAACGAGTAAGAGGAAGAAGAGTACGGATAGCAGTATTCGAAGTAGTAGGTCTTCGCTAGATACGGAAGATGTGATTTTTGAGGACCCATTACGCAATCCCTGCAATAGAACCGAGCCGATAACAGTGGTCGAACAACAGGAGCAGGTGATAGATTTGGCATGTAATGAAATATTTGCCAACATCGAACAAATACCGGCGGGTACGTCGTGTTCTAAGCCCATAACTATCTGCCAGTGTCATGCTCACGAAACTACGGTTCAAGATCTTCAAATCGAAATGGTGTTGCTCTGCAAAACTTGTAATGTTGTCTTCCGCCGTCGTGACTGTTTCGAGGTTCACTACCGTACGAGTTTGGAGTGCCGCAGACGACGCACTAATAACGAGGTGACCAAAATGCCCAAACTTTTCTGCAGTGGATGTCCCTGCGTTCTAGATTCTCTCATGGACATGCGAGCACATTTGGAAATGCATGCGAGGAAAAACAGCCAGGGAACCGTCACTTTTATATGCAACATTTGCAAAGTTGCATTCTTCGGCGTTGGCGGAATTTTTTACTCACATTGGTTCAACCACACGAAGGCACCTAACTTTGTGGCGAGTAGATATTCTTTTCCCAAGCTGTCGGTGGTCTCGGTGTTAGAGGATTCAAATGTCGCCATGACGACTAGCAAGAGCCAAGAAGGATTCTTCTATATTGCTGAACATGTTTGTCGACAGTGCAGATTACCATTCAGTTCAGAGCCTGAGCTTTTAAAACACAAGACTCATCCTTGTCAGCCACAGCAACCAGTCGCTCCACGTGTAGATACTCAAGAGAACAATCGTTTACAAATGATAAAGCTTATTTGTGATCTGTGCAAAAAATACTACGTTAGCAAAGAGAATTTCGATAGACATTGCAGTGAACGAAATCATCTGAAAACTCCCATCACGAAATTTTCTCGACTACCGATTAATGCCAATGAACAGGCTTTCGTCTGTAGCCTTTGTCGCGCCGTCAGCAAATCCCTCGATGATTTGAAGGAGCACTGGAAACGCATTCACAGTCCTATAATGGAACTGTACACTTGCAAGACTTGTAACATAGTACCCTCAAATGATGTCACGAATTATACTTATGAGAAATTTGAAAGGCACTGTCGCATTGTTCACAAGAGTGAAGTCATCACGTGTCTTGTGTATTTCGTTACGGCAAGATACGTTTGTAATATCTGCAGGTTCGGTTTTGAAACGGAAAAGTCAATGAAGGAACATCAGGTCGTACATCAGAAGAGATCAACTCAAAGCAGTAATTCAACAGTATCAGGGATGCCAATCGAACCACAAACAGCAACTCTATGGGTAGCTGATAAACAAGTGGCTCCCGATGGAGGTAGGAAAGTTCATCCTGTATATGTGCACTATCCTGGTATTAATGGCAACGTCAGTCGTCCGATCGCAATATTACCTGCTCCAGTGAACGCTCAAAGTCAAAACCAAACACACATTCGTAGTCAGAACAATGTAAACGCTAATCAGATGAACGTAGCATCGAACAACAGCGTCAACAGTTCTGGCACATCTAATAGTTCATCGACGAATTCGATGTTGCGTAGTATGCTAGCACAAAGGGCGCTTGATCAACCTTCACAACAGAACAGCAATAATTCGAACGTCGAAACGATACTAATCGATTCGAGATCTAATAGTCCGACATCGGATTCCACAGCCCTCGTTTCAAGAGATAAGTCTGCAATGAATAGCGTTGACTCAGGCGTCTCTTCAAGGAAATCCTATATGACCATGGTGAATCCCAACTTCGAATCAATGTTAGGAACAAACAGCGCCGTTCAGCTGGATGAAAGTAATAATGATAACTCTGTTTTGGACAAAGAGAATTCTAATTCCGGTGGTACTGCAACGCCCGTCAGTATGGATTTATTAACGCCGCAGCCGTTCGAGGTAGTTCTTGTGACCGACGATCTAAGCGAAAGTTCCAACTGCGATTCACCTATTATAAACGACAGAAGTAGAGCTAATGTAAATAAAATAGTTGACATTGCGAACTCGAATCAACAAAAACAGCATCAGACGTTGGAGGGTAAAGAGGTTTCGTCAACGAAGTCTTCCAAGTTCTTACGAGTACGTTCAATAGCAGAGCTTCAGCACATGAAGATAAATCTGTGTTCGGTATGCGGATTGAGTTTTGATACCCCCCAAGCTTTTGAGCAACATTCGCAACAGCACGAGAATCCTGGAGAGGTAAACCGGACAACACCAGTACAAATGATCTCGCCGATGCTTGCACAGAGTCATAAAGAGTCTAACGATCCGCAAAACATACTAATTTCACAGATGAGACACAAAATGGCTCTGCTGACACCTAATACAAAAGAATCGCTAAATAGCTTGAATTCATATAACAAAACAAACCCTTCAGTCCTTCCCAATCAATTTCAACATCCACAACAGCAGCAGCATTCTTATTGGTTTGCATCTTGCAACGGCAGACTCAATAACTCTTCATCAAACATGGCATATAATACATACAATCGTCAGCCTCACCAGCAGCTACATCATCAACAACAGCAAAATGAACATATTAATCAGCAGAACATCATCCGACGACCGGTTAACCTAAATACTGTAGGTAGTAATTACATGTCTCGAGGTCCACCGCCCGCCTATCCTAGTACCTCCAGTCCAATGACGCCAAGTCGGTCTAGTGCTATACAGCTGCCTGAGAGGAATACCTTGAATAATGCCATGCCGACAACGAAGCGACCTTCCGGCGCTGCCACAAGAATACCACAACAGATCTTGCCAAGTATAGGAGATTACACCGAGCACCGACAAACCGGTTCTCGTATGCCGTACACACCAGCCGAGAATATAAACAACACAAGGATGATGTCAAGTACATCTGTGAGACATTCCCAGCATCCTCAATACAAGTCCTATAATCGACATTCTGGTGAATTTAACTACCCTAGCAGTATTGGCAACAATTCTAATTATCATCATTCGCAACAACAGCATCCGACAAAGATTATTTACAACTGTAAGCTTCAGAGTTGCCCATTTCGATCCGAAAATCTTTCGATCCTTCGGGCTCATGAAAAAAACCATTTGAATCAGCAACTCTCTACGATGCCTAGTAACCCAATGCAACAGCAACAACGTCTTCCCTTAAAACACGTTCCAGTTAGTCAGATGCCCGAGAGAACGCGTCACGCAATACCAACCGGCCGTCCACCATCCCTTGTCAACCTTTCAGATAAACGATGCACCTGTCATGTTTGTAATTTCTTTTGTAATTCGGAGGTTGAATTGATTGACCATATGGCGCAGTGCCACAATACGCCGAATAGTCAAGTCTGCTGCTACGTTTGTGATTACTGCTCGACACCATTGATCTTCGAGTCGGAGGACTTGCTTCGTAAGCACATGAATGCCAATCATAATCACTCCTGTGAATTCTGCAACAAAAGGTATCCTTCGAAAGAAGATCTCATGATACACATGGAGGTGCACGCTAGAAGTACCTGA
Protein Sequence
MELLNETECNTISDDKKKKQNTLLEENKQKFILKKKFYNTVFATKMRNRRKEEKFEKLEKLEIKEVLTTCKPVSVDVTRLSSNIVPKVIPSIEHKNRRKKKFQWKLGKTKKKKKIRDKAGKIIKANTKDINEKNHRSENNVDETCLKTKEKLAVIQKLNGDKLEFPGDNDDIQRRKSIRHVTPMMFFDEKWDFETKADNGPIPEEKFSCRRTELFIGKLNTREARILNIEKILREENKPTSQNNNLVDNHDKDVLEKSENKVDESVLNSISNSVFEINKNVENNNSIKTCISIESSKNLENSSKEDHQNKDIGQSIVDTLKNVEMKAVIQESSNLSKEIETKEHVKDEEATCRRTVPFVGKISQNVSPGISERSTEIDFIKSNVKTKSDSSKNMKASNSSDDVSVKLISSKDEDIKTSSSSDLYTELNSSTNNVKSQLDMVLKDENKLNCSMQDVNIKLDSSNETDVKENLCNNVKLDHLSSNVSMKLEESLISEAKKEIWSCRRIEPYLGKDYPHCSRTLPFIYSVNKVKSLNISGSSTISNDILLSETVTKRLHQDKSDQLMALNKAKNTNIPENQENELINSVIDSAVNIDNNISDTSVQNVEWKFRRKRLKINLDKEQEEVRPSKKCKVKSSSESKPLINKKSIITSASPEKTICSLFSLNCTKHIHHSYNNESPIPHKNIMQDVFVLLTKLEYISDPLVIEYFKKIGFTNKLKKNLPSSKKNKADSDKAKVNLSGRKRLVSRENDPAAKDHFFSINAPRTNFDSNSNNVQTTNMKKVQDEDNRQSESERSISPPLTRPKTRSKRRPLSRSSTESLNIIHSKRKKRPVNYVENFSDSDSTESSLSALKHSKAHLKNRRLTLRDRQKLRTFSNHEIDENDMEVEEFTRIGLRNSTQSKGYGNRNIITSSSTSRSHGAEDSDTFNDNVSSRTASVVQNIEGAPSVQSIDKNSSINLANEMRDKVPNERFQVLEEIEKTVEETSLNPLRLRQRNQGSGVGQLKNFQYTEMTNNNINTKQQVFSRNARTPNLDLEVSSEQILLMTKTSNNSDGLIMMGKKSKVSRIDEFAGNLRKASSISSRSEKDNSRINGSKPKLNFDHSSTIKQTAKIMQLTNLKVQLIKLETVCDSFKDYSASEIELLTRKYIDLLMNSNFTCDTWRNPINYHRSEGFTEKHIEQVDNSDCVSDVESQEESEELLEDIETEDANNTSRIKPVIEDGVNKLIVKTSKQIETKLSSFTTLESAIATLVDAEPGEQRNFGAVNISEALISPSSSRMEKEKEQTVQLNNDKLNNENHEQLETNDKQQSTKSSSTILVNGTTMYPCPACNKIFVVENSLKQHQTIDHKVTGSSASKKSVSKCKRKFRYSESLKCTICSVTFDTRELLFDHIMTHNEQELQEAYKTAKAKAKQQSEGSNSMSEESDKDLHQEATQVSTTNKKKSKETSKRKKSTDSSIRSSRSSLDTEDVIFEDPLRNPCNRTEPITVVEQQEQVIDLACNEIFANIEQIPAGTSCSKPITICQCHAHETTVQDLQIEMVLLCKTCNVVFRRRDCFEVHYRTSLECRRRRTNNEVTKMPKLFCSGCPCVLDSLMDMRAHLEMHARKNSQGTVTFICNICKVAFFGVGGIFYSHWFNHTKAPNFVASRYSFPKLSVVSVLEDSNVAMTTSKSQEGFFYIAEHVCRQCRLPFSSEPELLKHKTHPCQPQQPVAPRVDTQENNRLQMIKLICDLCKKYYVSKENFDRHCSERNHLKTPITKFSRLPINANEQAFVCSLCRAVSKSLDDLKEHWKRIHSPIMELYTCKTCNIVPSNDVTNYTYEKFERHCRIVHKSEVITCLVYFVTARYVCNICRFGFETEKSMKEHQVVHQKRSTQSSNSTVSGMPIEPQTATLWVADKQVAPDGGRKVHPVYVHYPGINGNVSRPIAILPAPVNAQSQNQTHIRSQNNVNANQMNVASNNSVNSSGTSNSSSTNSMLRSMLAQRALDQPSQQNSNNSNVETILIDSRSNSPTSDSTALVSRDKSAMNSVDSGVSSRKSYMTMVNPNFESMLGTNSAVQLDESNNDNSVLDKENSNSGGTATPVSMDLLTPQPFEVVLVTDDLSESSNCDSPIINDRSRANVNKIVDIANSNQQKQHQTLEGKEVSSTKSSKFLRVRSIAELQHMKINLCSVCGLSFDTPQAFEQHSQQHENPGEVNRTTPVQMISPMLAQSHKESNDPQNILISQMRHKMALLTPNTKESLNSLNSYNKTNPSVLPNQFQHPQQQQHSYWFASCNGRLNNSSSNMAYNTYNRQPHQQLHHQQQQNEHINQQNIIRRPVNLNTVGSNYMSRGPPPAYPSTSSPMTPSRSSAIQLPERNTLNNAMPTTKRPSGAATRIPQQILPSIGDYTEHRQTGSRMPYTPAENINNTRMMSSTSVRHSQHPQYKSYNRHSGEFNYPSSIGNNSNYHHSQQQHPTKIIYNCKLQSCPFRSENLSILRAHEKNHLNQQLSTMPSNPMQQQQRLPLKHVPVSQMPERTRHAIPTGRPPSLVNLSDKRCTCHVCNFFCNSEVELIDHMAQCHNTPNSQVCCYVCDYCSTPLIFESEDLLRKHMNANHNHSCEFCNKRYPSKEDLMIHMEVHARST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-