Basic Information

Insect: Wiebesia pumilae
Gene Symbol: ZNF236
Assembly: GCA_018907045.1
Location: JACCHZ010000126.1:1981876-1998616[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0033 0.84 11.7 2.2 2 23 415 436 415 436 0.97

2 23 2.1e-06 0.00052 21.8 0.3 1 23 457 479 457 479 0.99

3 23 7.6e-05 0.019 16.8 0.9 1 20 485 504 485 507 0.96

4 23 2.6e-05 0.0066 18.3 1.6 1 23 513 536 513 536 0.97

5 23 0.00048 0.12 14.3 1.8 1 23 545 568 545 568 0.98

6 23 5.4e-08 1.4e-05 26.7 1.7 1 23 670 692 670 692 0.99

7 23 0.00016 0.04 15.8 2.8 1 23 698 720 698 720 0.99

8 23 0.0097 2.5 10.2 1.0 1 23 726 748 726 748 0.97

9 23 0.0077 2 10.5 0.9 1 23 752 774 752 774 0.93

10 23 0.005 1.3 11.1 4.9 1 23 839 861 839 861 0.98

11 23 7.5e-07 0.00019 23.1 0.4 1 23 867 889 867 889 0.98

12 23 5.5e-05 0.014 17.3 5.1 1 23 895 917 895 917 0.99

13 23 6.5e-05 0.017 17.0 5.0 1 23 923 945 923 945 0.98

14 23 0.093 24 7.1 1.9 1 23 1234 1256 1234 1256 0.91

15 23 0.0031 0.79 11.8 4.0 1 23 1262 1284 1262 1284 0.98

16 23 0.00064 0.16 13.9 3.0 1 23 1290 1312 1290 1312 0.97

17 23 2.6e-07 6.6e-05 24.6 0.9 2 23 1347 1368 1346 1368 0.98

18 23 3.7e-05 0.0094 17.8 1.1 1 23 1374 1396 1374 1396 0.99

19 23 1.2e-05 0.003 19.4 2.4 1 23 1402 1424 1402 1424 0.98

20 23 0.0065 1.7 10.7 4.2 1 23 1430 1452 1430 1452 0.96

21 23 4.8e-06 0.0012 20.6 1.0 2 23 1668 1689 1668 1689 0.98

22 23 2.9e-07 7.5e-05 24.4 2.7 1 23 1695 1717 1695 1717 0.99

23 23 5.4e-06 0.0014 20.4 4.1 1 23 1723 1746 1723 1746 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0033	0.84	11.7	2.2	2	23	415	436	415	436	0.97
2	23	2.1e-06	0.00052	21.8	0.3	1	23	457	479	457	479	0.99
3	23	7.6e-05	0.019	16.8	0.9	1	20	485	504	485	507	0.96
4	23	2.6e-05	0.0066	18.3	1.6	1	23	513	536	513	536	0.97
5	23	0.00048	0.12	14.3	1.8	1	23	545	568	545	568	0.98
6	23	5.4e-08	1.4e-05	26.7	1.7	1	23	670	692	670	692	0.99
7	23	0.00016	0.04	15.8	2.8	1	23	698	720	698	720	0.99
8	23	0.0097	2.5	10.2	1.0	1	23	726	748	726	748	0.97
9	23	0.0077	2	10.5	0.9	1	23	752	774	752	774	0.93
10	23	0.005	1.3	11.1	4.9	1	23	839	861	839	861	0.98
11	23	7.5e-07	0.00019	23.1	0.4	1	23	867	889	867	889	0.98
12	23	5.5e-05	0.014	17.3	5.1	1	23	895	917	895	917	0.99
13	23	6.5e-05	0.017	17.0	5.0	1	23	923	945	923	945	0.98
14	23	0.093	24	7.1	1.9	1	23	1234	1256	1234	1256	0.91
15	23	0.0031	0.79	11.8	4.0	1	23	1262	1284	1262	1284	0.98
16	23	0.00064	0.16	13.9	3.0	1	23	1290	1312	1290	1312	0.97
17	23	2.6e-07	6.6e-05	24.6	0.9	2	23	1347	1368	1346	1368	0.98
18	23	3.7e-05	0.0094	17.8	1.1	1	23	1374	1396	1374	1396	0.99
19	23	1.2e-05	0.003	19.4	2.4	1	23	1402	1424	1402	1424	0.98
20	23	0.0065	1.7	10.7	4.2	1	23	1430	1452	1430	1452	0.96
21	23	4.8e-06	0.0012	20.6	1.0	2	23	1668	1689	1668	1689	0.98
22	23	2.9e-07	7.5e-05	24.4	2.7	1	23	1695	1717	1695	1717	0.99
23	23	5.4e-06	0.0014	20.4	4.1	1	23	1723	1746	1723	1746	0.97

Sequence Information

Coding Sequence: ATGCGTGAGCTGGCAATTACTTTTGAGATCGATGCTGAAATTTGGAAAACTGCCTGTACGGCACGCACAGTTACAAATATTGATCCCGAAATGAAAAATTCACCGGAATTTACCGGAATTTTCAATCGTGCGTTAAAGTGCGTTAAAGTGCGGCTCGGTATACGACATACGACGTTGGGAAGGACGAAGGGGCAGGAGGGGTTAACGAGCGACATTAATTCTCGCGAGCGAGATCTTCTTTTTTACGGCGTGTGCCGAATCTCGCAATATGACGTTGCGACGAAAGACTTTCTCGAGAACCGGTATTACATGCGCTTTTTATATACTACACTTCCTTCCCTGTCGGCAGCGTCTGCTGTTCCGGTAAAGGCGCTTGGTACGTGGGCCTCGGCCCACAGGCGTGTACGTTGGTACGTGATCGTGCACGATCGTATATGGGTTACAAATAGTTATTCAAGAACGATCCTTACATTCGGGCACATCTGCTTTTACAACGACGTAGCGCGGATAATGAAATTACAACGGAGTCGGTATGAGAGCGTCCGCTCGAGCTCGAGTGCACAGCATCACGATTGTAATAAGCGAATAATCGCAAGACGCGCATACTTTGTCGGGAGCGAAAAAGCGGACTCCAAGTGCATTGCACTTGGATTCGCCGATCGCGTGTGTGCGCGCGGTGACTCCTCTTGCTTTCGTTCGCAGCCGGTTGTCGTAGACGACGGGACTCGCCAATTCGCATTTTCCTCTTCTAGAAATGCACTCCGAGTCGGAGACGCGGGAGGATACCGAGCGTCGGTCAGTTGGACGAGCGCCCGAACACCGCTCGGACGCGCGCATGGCACCCGGGAGGACGAGGACTCGACACGCGGACGCGCTCACGTGCCCCGTAGCGACGCGATGAGGTCCTTCGCGGGCGAGTGCCTGGATTTCGTCCTGTTGGCTATCTGCGCTCAGGCGTTTCGTCTCGGCTTGGGACTCGGAGCGCTGTTTCACAAGCGCTTGCGCCCATTAACGTGCCGCGAATCTCGTTACGGTCCAAACAAACCTCCGCATTTGACAATACGCAACGCCGTGGCACGGCGCTTCCAAACATTTATACCCGACCTATCGCGCATCGCCTCGGCGTCAATCAGCGGAGCTCGTTTGCTATCCGAGCGAACCAGTAACGCTTCGATGTTACAGAGCCAACTGGACGCCCACTCGAAGCTCCACAGCGAGAAATGGTCCGCCGACGACTACAGGAAGTGCAAGCTTTGCCGTAAGCAGTTCACCCAGCCGCTGCTCTACCGACAACACTTGCGCGACCATTACAAACTCCAGACGAAGACCACCAAGCAGACGAAGCGTGGCATCCGACACAGGACCGTGTACAAGTGCAGAATCTGCCTGAAGGCGTTCGAGAAGCCGAGCCAGCTGGCGCGTCACATCAGGGTGCACACGGGCGAGAAGCCCTACAAGTGTAATCTCTGCAATCGAAGCTTCACGCAAAAAGGTTCTGTGAGAATTCATATGTGGCAGCACAATGGAATCAGGCCTTACAACTGTTCGTTTTGTCATGCTAAATTTAGTCAAAAAGGGAATCTCAACGCGCACATTCTCCGGGTGCACAACATCCAGGAGGGTTCGCCCATGTACCGCTGCAGCCAGTGTCCGTGCATTTTCAAGAAGCTCGGCAGCCTGAACGGCCACATGAAGCGCGCGCACAACGACAAGACGCGAGACGTCGACGAGGACCCGGACAAGGAGGAGGAGGAACCGCCCGAGGAAGAGACGCGACCGCAGCCCGAGAGGCTCGATCTCCTTGAACGGACGGAGGAGGGCGTCGAGGTCGTGCGCGTCGAGCCCGAGGACGAGGCCAGCGAATTGCCAAAGGACTTCCAGGACGGCTTCGTCGTGACGGATGACAGCGAGCAGACGGCGGTGGTCACGCTCTTGGACAAAATGTCGAACGACGCGAAAGGAAAGTATATAAAAATAAAGCAGCGGTTTGTAAATAATTCTAGACTTTACGAATGCTCTTACTGTAAAAAAAGTTTTAAAAAACCATCCGATCTTATGAGGCACTTAAGAATCCATACACGAGAAAAACCTTACAAGTGCAAGATATGCAGTCGATCGTTCACTTTGAAATCAACGATGCTGTCGCACGAAAAGACGCACAAGAACACAAGAAAGTTTTCGTGTAATTCGTGCACTATGTTTTTCTCATCCGAGAAGGAGCTCCTGCTTCACGAAAAAATCCACAGTAAAGGCCACAAGTGCGGATTGTGCGGCAAAAAATTCATGGCGTTCGACCAGCTGAAGGCGCACTCGGCCCTCCACCAGTCGGGCAGGAACGAGCAGGACGGCGAGGGTAATCCTAATCGCCGGAAGAGCCAGTACACGTCGGAAGTGCAGAGCCTGGCGCCCAAGGTTGTCCTGAAGGAGCCGCTGGTGTTGACCGAGGCGAGCAACGGGTTGCTTCACGCCCAACCCAAGTTCCGCAATGAGGTCGGCCACGGTAAGGGCAGACCCCACAAGTGTCCCGCCTGTCCGGCAGCCTTCATGAAGCTCAGCCACTTGAAGCAGCATCACCGGAAGCACACCGGCGAGCGGCCCTACGTGTGCGCCTTGTGCGACAGAAAATTTACAACCAATAGTGCACTGAAGGCTCATCGTCGCATACACGATCTATTGAAACCGTACAAATGTTACGTTTGCAATCGAAACTTTTCAACTTCAAGCAGCATGAAGAGACATCACATTACGCACAGCAACAAACGACCTTACATGTGTCCGTACTGTAATAAAACTTTCAAAACGACAGTTAACTGTAGGAAGCACATGAAGGTTCATAAACAAGAAATCGCTCTACAGCAACTGGAATCTCAGAAAAAGCAACAATATTCAAGCTCAACCTCGAATAATATGGAAATAACCATGACGCAGCAGGATAATATTAGTAATCAAGAAGTAACCTTCCAGCCTATTACAAATAATTTAACGCAAAATTTAAATGAACAGCTTGAGACGATAATGAAAAATAAAGATACAGATTTCATGACTATTGCACCATCCTCGCAAAATATTAACATGCCAACGCAAAATATGTCCCTAGTAGACAACTCTAACGTAGGTGCGACTCAAGCATTACACGCCGATGAGACAGGCACTATTACCCTTCCTAACTATTCGGGCAACCAATCGCTTACACCTGAGAGCATACGAGAAATCGAGGAGACTTTGAACCAACAATTATTCAGCATTGGAATGAATCTTGCGCTGAACAATACCGTCAGGCAAATCGAGGAGCACAACAATACTTCTTTGGAAAATCGAGACCAACCGATTTTAAGTATAATTTACGATAATGGAAAGAACATGGAGTCGTCCATTAGTACAGCTATAAATACCAATGTTTTCTCCGCGCAATACGACACGTTTGACATTAATCAAATAACACTGCAGGAGGATAACGACATGGATATGGGTATAACGCAATCCAATGCCACTAATATGGCAAGTATTTTACCACAATCGATTCAAGAGCACAAGCACTACAGTCCGCAGTTACTCGATCAAGATTTTCAAGATAACGTAGTGCTCAAGCAGAATTATCTAAGCAAAGACATTGAAGTATTTAATGAGGCGTCAATCGTCGATGCTGAAAAGGAACGATCTTACGATGAAAACAATGAACATTTCATTACGGAACATAGCTATCAGTGTCACATATGCAATGCGCAACAATTTAGCGCGGACAGGTTGAAAGAGCATCTGAAAACGCACCAGGATAATAAAGAATTTCAGTGCACTCATTGTTTTTCTAAATTTTACACGAGTGGGGGTCTTAGCAAACATTTGAAAGTCCACGAAACCGAAGAAACGCACAAATGTTACGAATGTAACGAAGAATTTTCCACTACGTTACAATTAAGAAAGCACATAAAAGATCACGTGAAACTTGAATTGCAACTTAAGAGCCTAACGAATCAGGACGATATCCATATGAATATTGAATCGAGACTGGACGACGAATCCGTCGATAAAAAGTTTAATAAATGTAAATACTGTCCTAAGATTTTCCGCAAGCCCAGTGACCTCATTAGACACGTTAGAACTCATACCGGTGAGCGACCGTATCAGTGTAACTTTTGCGACAGGAGCTTCGCTGTTAAATATACGCTGGACTCTCATTTAAAAATACACGGAGAGGAAAAGTCATTTTACTGTCACGTGTGCAATAGTATGTTCGCAACAAAAGATAGTCTTAAAGTTCATATGAGATTGCATACAGGTGTCAAGTCATTTAAGTGTTCCCTTTGCGAGATGAAGTTCCGCACTTCCAGCCATCGAAAGGCTCACTTCGCGTCTCACGCGCAGGATCCAAACCCATCGTCGTCCGCTCCATCCCAGTCCGAGGTGCAGCAGGAGGCCACACTCGTAGCGGCCAATTACGACAAACTGGAGGAACCCAAGGACGAGCAAATCGTGCGAATCGTACACACGGCGCCCGTGATCCAGCCGATCCTCCCTCAGCCAACGGACGAGCAGGTGATCGACGACAATCCCGGCCTGAACGCCCTCACCGCCGACCCGATGACCTTCAGCGCGGACTGCACCGCTTCGAGCGACAGCACCGGCTTCCTCGCCCTCAACGAGAACAATCAGCTAGTCGCCAATCTCCAGTTCTTGCTCGCGAACGGTCTCGTCACCATACAAACGGAGGATCCCGCCCTGACCTCGCAACTGCCGCTCTCCTCCTCGAGTGGCGTTCAGAACGATTTTCTCGCGTCTAGCGTTGTGCAGAAGGTTCAGGATCAGGCGACTGACCTGCAGGTTATATTCGCCGCGGATATGCCCGACGCGGATGTCTCACAACGAGATATCAACGAGAGCGACTTCGAGCTCAACAACAGCATGGTCTTGCATATGGGGGGGAATATGGACTCGACGGTATCTGATAAGAACGAGGAGAGCAGCTTGAAGCAGACGAAACCGCCGAGCAATGCGGCGAGACGCCAGTGCGACATTTGCGGCAAGGCGTTCGCGAAGCCCTGCCAACTTGAGCGACACAAACGCATACACACGGGCGAGCGTCCGTTCAAGTGCGACTTCTGCGGCAAGTCCTTCGCCCAGAAGTCGACCCTGCAGATGCACCAGAAGCGCCACACCGGCGACCGGCCCTACTGTTGTCCCCAGTGCCAGCGCTCGTTCACCCAAAGCGGCAACCTCCAGACCCACCTGAAGCGCAAGCACAAGGTCGATCCCGCGGAGACCAAGAGATTGTCCAAGACCCAGCAGTTCGTCAATTACGATCCGAAACTTCTGCAGCAGAGCATCGAGGACCCGAGGGTGCTCAACTTGGATGACATATCGATCGTCGAACTGTTCAAATAG
Protein Sequence: MRELAITFEIDAEIWKTACTARTVTNIDPEMKNSPEFTGIFNRALKCVKVRLGIRHTTLGRTKGQEGLTSDINSRERDLLFYGVCRISQYDVATKDFLENRYYMRFLYTTLPSLSAASAVPVKALGTWASAHRRVRWYVIVHDRIWVTNSYSRTILTFGHICFYNDVARIMKLQRSRYESVRSSSSAQHHDCNKRIIARRAYFVGSEKADSKCIALGFADRVCARGDSSCFRSQPVVVDDGTRQFAFSSSRNALRVGDAGGYRASVSWTSARTPLGRAHGTREDEDSTRGRAHVPRSDAMRSFAGECLDFVLLAICAQAFRLGLGLGALFHKRLRPLTCRESRYGPNKPPHLTIRNAVARRFQTFIPDLSRIASASISGARLLSERTSNASMLQSQLDAHSKLHSEKWSADDYRKCKLCRKQFTQPLLYRQHLRDHYKLQTKTTKQTKRGIRHRTVYKCRICLKAFEKPSQLARHIRVHTGEKPYKCNLCNRSFTQKGSVRIHMWQHNGIRPYNCSFCHAKFSQKGNLNAHILRVHNIQEGSPMYRCSQCPCIFKKLGSLNGHMKRAHNDKTRDVDEDPDKEEEEPPEEETRPQPERLDLLERTEEGVEVVRVEPEDEASELPKDFQDGFVVTDDSEQTAVVTLLDKMSNDAKGKYIKIKQRFVNNSRLYECSYCKKSFKKPSDLMRHLRIHTREKPYKCKICSRSFTLKSTMLSHEKTHKNTRKFSCNSCTMFFSSEKELLLHEKIHSKGHKCGLCGKKFMAFDQLKAHSALHQSGRNEQDGEGNPNRRKSQYTSEVQSLAPKVVLKEPLVLTEASNGLLHAQPKFRNEVGHGKGRPHKCPACPAAFMKLSHLKQHHRKHTGERPYVCALCDRKFTTNSALKAHRRIHDLLKPYKCYVCNRNFSTSSSMKRHHITHSNKRPYMCPYCNKTFKTTVNCRKHMKVHKQEIALQQLESQKKQQYSSSTSNNMEITMTQQDNISNQEVTFQPITNNLTQNLNEQLETIMKNKDTDFMTIAPSSQNINMPTQNMSLVDNSNVGATQALHADETGTITLPNYSGNQSLTPESIREIEETLNQQLFSIGMNLALNNTVRQIEEHNNTSLENRDQPILSIIYDNGKNMESSISTAINTNVFSAQYDTFDINQITLQEDNDMDMGITQSNATNMASILPQSIQEHKHYSPQLLDQDFQDNVVLKQNYLSKDIEVFNEASIVDAEKERSYDENNEHFITEHSYQCHICNAQQFSADRLKEHLKTHQDNKEFQCTHCFSKFYTSGGLSKHLKVHETEETHKCYECNEEFSTTLQLRKHIKDHVKLELQLKSLTNQDDIHMNIESRLDDESVDKKFNKCKYCPKIFRKPSDLIRHVRTHTGERPYQCNFCDRSFAVKYTLDSHLKIHGEEKSFYCHVCNSMFATKDSLKVHMRLHTGVKSFKCSLCEMKFRTSSHRKAHFASHAQDPNPSSSAPSQSEVQQEATLVAANYDKLEEPKDEQIVRIVHTAPVIQPILPQPTDEQVIDDNPGLNALTADPMTFSADCTASSDSTGFLALNENNQLVANLQFLLANGLVTIQTEDPALTSQLPLSSSSGVQNDFLASSVVQKVQDQATDLQVIFAADMPDADVSQRDINESDFELNNSMVLHMGGNMDSTVSDKNEESSLKQTKPPSNAARRQCDICGKAFAKPCQLERHKRIHTGERPFKCDFCGKSFAQKSTLQMHQKRHTGDRPYCCPQCQRSFTQSGNLQTHLKRKHKVDPAETKRLSKTQQFVNYDPKLLQQSIEDPRVLNLDDISIVELFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -