Basic Information

Gene Symbol
KDM5A
Assembly
GCA_018907045.1
Location
JACCHZ010000104.1:2079734-2093674[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.3e-25 3.7e-21 76.8 0.0 2 89 124 207 123 207 0.94
2 2 0.81 6.9e+03 -1.0 0.0 44 65 1082 1104 1080 1116 0.74

Sequence Information

Coding Sequence
ATGGTCTCGAAACTACATGGGGGAAACAACAGATATCAGTGCACGGGCCCGTTCATCGACAGTCTCGGGGCGAGCAGACGGGCCACGGAAAACTCGGCTATGGGCCAACGAGAGGATTTTGAGTTCCGAATACCGCCCGAAGCCCCGGTTTTCGAGCCAACGAGCGAGGAGTTCCTCGACCCCCTAGGCTACATCGCCAAGATACGGCCGATCGCCGAGAAGTCGGGCATCTGTAAAATTAAACCACCACCCGTGAGTAGAACTTTAATCGCGCGTAATTGGCAACCACCATTTGCTGTGGATGTAGATAAATTTAAATTTGTTCCAAGAATACAAAGGTTAAATGAATTGGAAGCAAAAACTAGGATTAAGCTTAATTTCTTGGACCAAATAGCAAAATTTTGGGAACTTCAAGGATCTTCTTTAAAAATCCCATTGGTTGAACGTAAAGCATTGGATCTGTATTCACTACACAGAATTGTCACTGATGAAGGTGGTATTGAAACTGTGACAAAAGAAAGAAGATGGGCAAAAATAGCGAATAAAATAGGCTACCCATCTGGACGCAGTGTTGGAAGTATTCTAAAAAACCATTATGAAAGAATTTTATATCCATTTGACGTCTTTAAACAAGGAAAAACCTTAGCTGACATAAAAATTGAACCTGATTGTGAAGCAAATGAAAAGAAAGATAGGGATTATAAACCACATGGAATCATATCGCGACAACAAATTAAACCACCACAGGAAAAGTTTTCTCGAAGATCAAAGCGTTTTTCTGGACAAGATGAGAAACAAAATGGTTGTCAATCAAGCATCAAACAAGAAGATTGTAAAGAGGAAATTGATATGGATTGTAAAAATAATATTAAAAGCAAACATATTATTGATTCCAAGGATAATATAAAAAGCAAAAATCTGATAGACACCAAGGACAATATTAAGGGTAAATGTTTACAAGAAGCAAAAGATGTTATTAAAACCAGAGGTGCAACAGCAGAAAAAGATAAAGAAAATAGTAAGGAGCTGAAAAAATTACAATTCTATGGAGCTGGTCCCAAAATGGCTGGCTTTAATACCAAAGAAACAAATAAGAAATCAAATAAAACTAGAGGAGTAAAACTAGTCTACGAATTTGATCCACTTGCTAAATACATATGTCACAATTGTGGAAAGGGAGATAATGAAGAAAATATGTTACTTTGCGACGGATGCGATGATAGTTATCATACGTTTTGTCTATTGCCCCCACTAACAGAAATCCCGAAAGGAGATTGGCGATGTCCAAAATGTGTTGCCGAAGAAGTATCAAAGCCAATGGAAGCTTTTGGATTTGAGCAGGCACAAAGAGAATATACTTTACAACAGTTTGGAGAAATGGCGGATCAATTTAAAAGCGATTATTTCAACATGCCTGTACATATGGTACCCACTGAACTTGTAGAAAAGGAGTTTTGGAGAATAGTATCATCTATTGATGAAGATGTTACTGTAGAATATGGAGCTGACTTACATACAATGGATCATGGATCTGGTTTTCCAACAAAGACAAGTGTTAATCTGTTTACTTGTGATCAAGAATATGCAGAATCTTCTTGGAACTTGAACAATTTACCAGTATTACGCGGCAGCGTTCTTGGTCACATAAATGCAGACATTAGTGGAATGAAAGTTCCATGGATGTATGTGGGAATGTGTTTTGCCACATTTTGTTGGCACAACGAAGATCATTGGAGTTATTCTATTAATTATTTACATTGGGGTGAACCAAAAACATGGTATGGTGTACCCGGTTCTGAAGCTGAAAAGTTTGAGCGATCCATGAAATCTGCTGCACCAGAACTCTTTCAAAGTCAGCCGGATTTACTTCACCAATTAGTAACCATTATGAATCCAAATATTCTCACAAGTGAAGGTGTACCAGTATTCAGAACAGATCAACATGCTGGTGAATTTGTTGTCACTTTTCCTAGAGCCTATCATGCAGGTTTTAATCAAGGTTACAATTTTGCTGAAGCTGTAAATTTTGCTCCTGCAGATTGGTTGCAGATTGGCAGAGAATGTATTGCACACTATTCAAATCTAAGGCGATTCTGTGTTTTTTCCCATGATGAATTAGTCTGCAAAATGTCTCTAGAACCAGACAGCTTAGACATTGGAATAGCTACTGCAACATATCATGACATGCTAACAATGGTTGAAGATGAAAAGAAGCTCCGAAAAAATTTACTAGAATGGGGTGTTACCGAAGCAGAGCGCGAGGCTTTTGAACTTTTGCCTGATGACGAAAGACAATGCGAAGCATGTAAGACTACATGTTTCTTGAGTGCAGTGACCTGCTTGTGCCACAAGTCACAATTGGTTTGTTTAAGGCATTTTACAGACCTTTGTGAATGCTCTCCTGAAAAGCATACTTTACGATATAGATATACCCTAGACGAACTTCCAATCATGTTGCAAAAGTTAAAACTAAAAGCTGAGTCATTTGACTCGTGGGCTAGTAAGGTTAAAGAAGCTATGGATCCAAAAGGAGAGAAAATCGAACTGAATGAATTGAAAGAATTGTTAGATGAAGCAGAAGTAAAAAAATTTCCTGAAAGTGAATTACTCACTGCTTTAACAACTGCTGTACAAGATGCTGAAAAGTGCGCCAGTGTTGCCAGGCAGTTATTAAGTAACAAACAAAGAACAAGGACAAGACAATCGGTTGATGCAAAATTTAAGCTAACGGTTGAAGAACTTACCTTATTTCATCAGGAAATTACAAACCTATGCTGTGAACTTAAAGAAGCTGATGGTGTGAAGTACATTCTAGATCAAGTACTTCAATTTCAAAGGGATGCAGAAGAATTAGAAGCACAAGAGATCGATTGTAATATCGAAAAGCTCGAAAAGTGTATTGAATACGGTGATTCAATTTGTATTGAATTACCGCAACTTTCAAGATTGAAGCAGAAGTTACAACAATTACGTTGGTTAGAAGAGGTTAAATCCATTCAAGAAGAATCAAAATCCGTCACAAGACAAGATTTGGGAAAACTTATAGAAGAAGGAATGAATATACCTCCACATTCAACTGTTGAAAATGCTTTGGCTCAACTTCAAACTTTAATGATTAGTATCGATAACTGGGAGGATAAGGCAAAACTTTACCTTCAAGCTTCTAAAAACAGACAAACAATTTCATCCGTTGAAGAACTTATTACAGAAGCAGATAATATTGATGCGTATTTACCAGGATTAGGTAATCTTAAAGATGTTTTAAATAAAGCTAAGAATTGGACCAAAATTGTTGAAGAAATACAAGCTAGAGAAAATTTCCCATATTACGATACTTTGGATGAATTAGTTCGTAAAGGTAGAACTATTCCACTGCATCTTGCTGCTTTACCTGTCCTCGAATCAACTTTGGCTCAAGCAAAAATATGGAAAGAAAGAACAGCTAGAACATTCCTTAGAAAAAATTCCCATTACACATTAATGGAAGCACTATCACCTAGAATTGGCGTTGGGTTGCATGCAATGAAAACTCGTAAAAATAACAAAGGAGAAGATTCTATTGGAGCTGTATATGTTTGTGATACTAAATTGGATGATTCTAACGACTCTGCAACTGTTGTAGCAGCATTCAAATTAGCAGAACAACGTGAAATGGAAGCTATGAAGAACTTAAGAGAAAGAAATGTTGGTAAAATGGAAATTGATGATTCAAGGTTTTGCGTTTGTCGACGGTCGAAATTCGGCCAGATGTTACGTTGTGAGCTTTGCAAAGATTGGTTCCACACAAACTGTGTCCCTGTACCAAGAACTCCTTATAAAGGCAAACAGCAGAATTCAAGAGTGACTAAATTCTTATGTCCATGTTGCTTGCGTTCACGTAGACCACGTTTAGAGACTATTTTGTCACTTTTAGTAAGTCTACAAAAAATTCCTGTTCGCTTACCAGAAGGTGAAGCTTTACAGTGTTTGACAGAACGTGCAATGAATTGGCAGGATCGAGCAAGGCAAGCTCTGTCTGCTGAAGAAGTATCTTCAGTATTAACAAAACTTAGCATTCTCTCTCAGAAGTTAACAGAAGCTGCTGCTAGAGAGAAAACTGAGAAAATCATAAGTACTGAGCTAAAGAAAGCAGCAAATAATCCAGAACTTCATCAAAGGGTTCAAATAATTGCTTCTATGAGTGGTGTACATTCTGATGATAGTGTAATAAGTATTCCTGTAAGACTTATATACTTTAGTAGTGCATTCAATAGCAATGAGCATGCTTATTCATCAGCATCAAAATTCCCTTCAAAATCGTCATCTGGGGATGACAAAGACAAAATAGTAACATTATCTAGTAATACCACTACACACTTAGAAGAATTAATGATGGAAGGAGATCTTTTAGAAGTTGCTTTAGATGAAACTGAGCACATATGGCGAATTCTTAGTCAAACGTGTACACCCTCGAAAAGCGTACGTAAATACGCACCACTGGATCCATCATTACCCATTACTGAATCTAAAGATCTTAAAAAGCAACCCCAACAGCGAGGCCGAAAACGAAAATCCGATGAATTTGAAATGATGAAAAAATTCGGTCGTCAGAGAATAGACGAAAAGCCTGTAGTTAAGCGCAAAGGATTAAATAAAGACACGAAATCGACGATTCCAATTGGATCAATGAAGAGAGGTCCACGCAAGATGAAACGAAAGGACAGCGATGAAGGCTCTAAAAGAAGAACTGGAAATAGAAAGAAAACCAAACAAGACACATCTGACGAAGAAGAAGATTGTGCTGCTGTTAACTGTTTAAGACCTAATGGACGCGAAGTGGATTGGGTTCAGTGCGATGGAGGCTGTAATGGTTGGTTTCATATGCACTGTGTTGGTTTGGATCGTACAGAACTTGCTGAAGAAGATGATTATATTTGCAGTAATTGCAGTGAAGCAGATGTAAACTCATCGAGTCAACAGGATTACCATTCATCGCAGTCGTCGCACACTGAGGTCACCGATAATGAAGGCGAATTAGAAGAAGACTTACGAGAGACAGTCAGCATCATTAGGATCTATTAA
Protein Sequence
MVSKLHGGNNRYQCTGPFIDSLGASRRATENSAMGQREDFEFRIPPEAPVFEPTSEEFLDPLGYIAKIRPIAEKSGICKIKPPPVSRTLIARNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIETVTKERRWAKIANKIGYPSGRSVGSILKNHYERILYPFDVFKQGKTLADIKIEPDCEANEKKDRDYKPHGIISRQQIKPPQEKFSRRSKRFSGQDEKQNGCQSSIKQEDCKEEIDMDCKNNIKSKHIIDSKDNIKSKNLIDTKDNIKGKCLQEAKDVIKTRGATAEKDKENSKELKKLQFYGAGPKMAGFNTKETNKKSNKTRGVKLVYEFDPLAKYICHNCGKGDNEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAEKFERSMKSAAPELFQSQPDLLHQLVTIMNPNILTSEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLQIGRECIAHYSNLRRFCVFSHDELVCKMSLEPDSLDIGIATATYHDMLTMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCLCHKSQLVCLRHFTDLCECSPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWASKVKEAMDPKGEKIELNELKELLDEAEVKKFPESELLTALTTAVQDAEKCASVARQLLSNKQRTRTRQSVDAKFKLTVEELTLFHQEITNLCCELKEADGVKYILDQVLQFQRDAEELEAQEIDCNIEKLEKCIEYGDSICIELPQLSRLKQKLQQLRWLEEVKSIQEESKSVTRQDLGKLIEEGMNIPPHSTVENALAQLQTLMISIDNWEDKAKLYLQASKNRQTISSVEELITEADNIDAYLPGLGNLKDVLNKAKNWTKIVEEIQARENFPYYDTLDELVRKGRTIPLHLAALPVLESTLAQAKIWKERTARTFLRKNSHYTLMEALSPRIGVGLHAMKTRKNNKGEDSIGAVYVCDTKLDDSNDSATVVAAFKLAEQREMEAMKNLRERNVGKMEIDDSRFCVCRRSKFGQMLRCELCKDWFHTNCVPVPRTPYKGKQQNSRVTKFLCPCCLRSRRPRLETILSLLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALSAEEVSSVLTKLSILSQKLTEAAAREKTEKIISTELKKAANNPELHQRVQIIASMSGVHSDDSVISIPVRLIYFSSAFNSNEHAYSSASKFPSKSSSGDDKDKIVTLSSNTTTHLEELMMEGDLLEVALDETEHIWRILSQTCTPSKSVRKYAPLDPSLPITESKDLKKQPQQRGRKRKSDEFEMMKKFGRQRIDEKPVVKRKGLNKDTKSTIPIGSMKRGPRKMKRKDSDEGSKRRTGNRKKTKQDTSDEEEDCAAVNCLRPNGREVDWVQCDGGCNGWFHMHCVGLDRTELAEEDDYICSNCSEADVNSSSQQDYHSSQSSHTEVTDNEGELEEDLRETVSIIRIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309292;
90% Identity
iTF_01218866;
80% Identity
-