Waur000869.1
Basic Information
- Insect
- Wasmannia auropunctata
- Gene Symbol
- -
- Assembly
- GCA_000956235.1
- Location
- NW:339198-352130[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 4.8 3.5e+02 1.4 2.6 2 19 162 179 162 182 0.82 2 17 0.21 15 5.7 4.1 3 21 191 209 190 210 0.92 3 17 0.027 2 8.5 2.4 1 23 222 245 222 245 0.92 4 17 0.0051 0.37 10.8 1.1 1 23 659 682 659 682 0.94 5 17 1.5 1.1e+02 3.0 0.5 5 23 689 708 688 708 0.94 6 17 0.87 64 3.8 0.3 2 23 714 735 714 735 0.95 7 17 0.00036 0.027 14.4 0.6 4 20 763 784 761 785 0.83 8 17 1.2e-05 0.00087 19.1 0.2 1 21 924 944 924 944 0.97 9 17 0.00075 0.055 13.4 0.2 3 23 953 974 951 974 0.92 10 17 7 5.1e+02 0.9 5.8 1 23 984 1007 984 1007 0.93 11 17 0.084 6.1 7.0 0.2 2 21 1035 1054 1034 1055 0.91 12 17 0.015 1.1 9.3 3.7 1 23 1096 1119 1096 1119 0.90 13 17 0.33 24 5.1 0.8 1 20 1164 1183 1164 1184 0.95 14 17 0.034 2.5 8.2 6.1 1 23 1192 1215 1192 1215 0.96 15 17 0.0096 0.71 9.9 0.3 1 23 1287 1310 1287 1310 0.92 16 17 0.026 1.9 8.5 0.1 1 23 1576 1599 1576 1599 0.96 17 17 0.041 3 7.9 2.5 2 23 1626 1648 1625 1648 0.95
Sequence Information
- Coding Sequence
- ATGGCTAGAGTTCAACCATACGAAAGAGTTGTGGATGCTGTAGTCATACATACAAGTCCTGTActTGACATAGAAATCCAAAATGGGACGAAGATTAAGAATGAGCCCATCGATACAACATCGAATCCTGATACAACTGAAGATAATACTATAGTTAGAAATTGTTTTAGTTTAATTGATCACGATTATCATCGCGATAAATCATTatctaaaaatgataattcatGTAAAGACATAAATAGTACAGAAAATAGAGATGCATCAAATAGTCATAATGCACATTCAAACGACAAAATCAAGACTGTTAATATAGAGcgtaaaaaagcaaaaaaaagaaaaaaatgttccaatGAAATCTCTAACAATAAAAACACTAGCGCATTATGTATAACGGAGAATgttaggaaaaataaaaaacaaaacagCGTCAGATTagattataaaacaaaaagacAATATAAATtggtaaaaaaagaaaatgcaaaatgtGACATTTGTTTTAGACAGTTCTCTTCTGTTCGAAATTGTGAAACTCATAAACAATATTacgaatttgttaaaaataattattgtaggTTTTGTGATAAGCATTATATAACACGCGAGAAATTACAGTCTCATACGTGTCAGTCTCCCCGTCTATATATTGTGCGTATGtatgaatataattgtaatttttgcaGTCAGATTTTTTATGATAAGATATTGTTACAATCTCATTTGTTTCATGTACACAATgaattaatatgttttaatagcACGATAACAAATACTAGTAAACTACGCGAAATTTCGAAATCCGAGATCTATAAAGTAAATACATCTCCTAAAGATAATACTTTAAAAACTAATGCAAATGAAGAATcgttatgtttaaataatctcataaaagcagaaaaaataaatattacacttacaaataatattaataaatcttgCGACGATAGTGTAATAGATACTGAACAAtcaaagattgaaaaaacattcaataatGAAATGACGCCAACTAAAAGATTACGACAACCAACATTAACGGAATACCTTGATCTTTGCAAAAAGAAACGTGATATTAAACTCAAtccaaataaattgaatattatgaAAGATGAGTCTCCAACGTGTACTTTAGATCGTGttgaaatagaagaaaatcCAAGACTAAAACTTTTCGAAGAGCAAAATGGACAATTTGATTCTTTATCtacaaataaagataatatccCAGATAATATCCCAAAACAAATGGCAAGTTCTATTCAGAAACAAAGTGTGAAACCTGAAAtatgtttacgtaaaaaaCCATTTGTAAAACTACATGCGGATGTTGAAATGATGAAATCCTTTCTCGAAAATCTTACTGATACGGTTGTCAAAGATAAAGTGACCGAAGATCGAACAAAGAACATTGTTTCAAATGATCGCGGAATATTCTACAGTTTACGATCTTTAAATAGAGTTTCTTCCGTGGAAGTGAGCGAAGATCGAACAAGTGACATTGTTTCATATGATCGCGGAATATCCTATAATTTACGATCTTTAAATGGAGTTTCTTCCGTGGAAACAAGTTCAAATTCGGAAATAaggaagaataaaaatgtatctaaGAAGTCTCCGTCAAACATAGAATTCAGTATTAAAAAGGAACAGAATGTGATTGATTCAGACAACGTAGATCCTACAGTAGGTCGGAAAATGATTATGGATTTCAAGTGCAAAGGATGTACAATTCCCTTAATAAAATGTGATGAACAACCAAGAAATTCTAACACGATTTCTACAATTGAAGCCATAGAAAACACTTCCTTTATTACTACTCAATGCAACTTCAAACCAACTACGTTGGATCAAGAAAGTGATGTACGaaataaaatgacatttaAAAACTTAGAGGTTTCTCTGGAACGTTTAACAGCTATTCCAACTATAGATATAAAAACAGAAACATTGGACACCAACAAAcacaataacaattattttttatgcaaagtTTGTAAGGAaagtttttcttcaaaattggCTAAACGCGTACATATTAAGTCGTCTCATATAGCATATATGTCAAGCATATGTGATGCACGATATACGCTAAAGCATAAATTACTTGAACATTATCTACGCGAACatctatttaaacaaaatcaatgttgcatttgttttatattattacccGATTATGAAGCGCTGAAACAACACTTAAATGTTCATTGTCTGAAGTATATTAAAAGAGAGGACGACCAATATCCGGtagatattgaattaaaatgtaacttgataaaaaaaaattgtaagtcAATTGTACGTCTTCATTGCAACAAGACATTCTCGTCGCAATCATCTTTAATAGCACATCAAAGTTGTTGCACAGTACAAGAAGAAATGAAGGATGAGAAAAATTTCATGGAAGAAACAAATGCATACTCAACGGATATTTCTGAGATACAGCACAAGAAGAAaactaatgaaaatataattacatgtgATGAAAGCATTAATTCGGATGATTTATCTAAACCTTCAAATAGCGACTccgtaaaaaaatcaaataaatatcaaaaaacaCTTCATAGTGAAACAGAATTGAAActaaatgaagaaattaatgaagctaatcgaaaatttcttgttaataataactcaattgagaataaaattgaatctGTCAATGAATCACAAGACCCTAAAAagcttttagaaaataatagttCCACAATTAGTAATCAGAACAGCGCAAATACGCAACTGAATGACATTACAACAAAAAGTATGACTTATCCCTGTGATATATGTGGAAAGCAATTTCACAATCCCAAAAATTTGGAGCTACATATACGCTGTTTTAGCGTTACTACCGATATTTGTCCAATGTGTCGCACTGGATTCAGTTCTAAACGTCTTCTACAGACACATATTACTGCAGCACATGTACCACAGATTTCAAAGACTTACAATTTTCATTGCGTATTCTGTAACcaaggattttttaaaaaacacgATCTTCGGCctcatatattacatttacatgGTCAACAAGTGCTCAACACGCTCACACGTAATCCTAATATGAGTCAAGAGAAATCCGATAAATCAATTACTCATGTCATAACATGTAACATTTGTAATTTGGTATTTGAGACTCATGATCGCTACGTAGAACATCGGatgtattattacaataatcaTACATTCAAATGTTCCATTTGTGCACAAAACTTTCAAGGAATGTATATGTATCATCATCataataaacttatacattGTCCAGAGGATAAACGCAagtcatataattatatctgcGATATATGCAATGAGGGATTTAATCATGAGTCACATTTTTATTCGCATACTGTGCATGTTCATTCGAAAGAAGtgaatttaattgaaactACAAAAGAATCTGAAGATAGAAACTGTAATTCATTCAACGTCCAAgaacagattaaaaattttcccaCGAATCAACAAAAACGAAATGAACAGTTGTCCAACAAGTATACTTGTCAAATTTGTCAGGTGAAATGTATAGATATGGCTCATATGATAAAGCACAAAGAATGTTATTCCAATGACGGCGATTTTAAATGTGACAAGTGTAACAGACGATGCAAAACTTCTTTTTTACTTGatcaacataaaaaattaactcacTTTTATCGGGATATTTTTAATGGACATGTATGTCATATTTGTGACGAAGTTCTGGAAACTGTTTTTGCACTGAAGTGTCATGAAAAACACTTCCATTCAAATATTACCAACAATAATACGGATAATAGTGGCCAAATGTCATCATCTTCGAATATTACATACAAGATAATAGAACGTCCACATGAATCTAAGAATAATACATCTAATACTGAGTACGATTGTTTATTCTGCGATATGAAGTTTTCCACTTCAAACGCTGTCCAAACACACATTGTTTACGTTCATATGGATGATATGATAGCTAAACGAACTACTTTAAAACTTAGTCTTCCCATTATTAATAACGTTGATATACAGAAACAATTTGTTGAAACTGTTCAAGTaccatcgtcatcgtcatcgttatCATCGTCATTAGCATCGTCATCTGAAAAGAAAACAGCTCAACTTCTTCAAAACTCGACTTCTTCAATGATTCAACAATCTAAAATTATCCTAAATAATACTATGGCTAAAAATGGAATAAGTGTTAAAACTACTGAATTATTAAAGCAATTTAGAGCTGTACattcaacaaataaaaatacagaaaagaCTGCAATTCCATGTATTGACAGATCTAAAGACAATGTTTTGTCATGTAATACTATTGCATCAAATACGGAACCAAAAACGAATATCTCAGTATCTTCATCCATTGGATCAACAACTAGAACTGACGTACCAAGCACTGAATTAGGAAATAACACTTCAGTTCCTCTATCTTCTGGATcgacaatatttaaaactgtcGTACCAAATACTGCATCCAAAAATAACACTTTAATTTCTCTATCTGGATCTGTTAAGGATCTCGGAAGAAAATGTTATGAAAATCCTTTAAAATCTGGATCAGTCAATGAATTTAAAGCTAACTCATCATCGAATAGatctgtaataattaatcaatcaaaaaTAGCACCTGTATATCTTTTCTCGAGTAAACCTTTATCAACATTCAAAGATGTTATGCCACAATCATGGAAAAGCAATGAAATTACAAATCAGAAATCTGTATCAGTGAACAATTATGATCATGGTTATTCATGTCCATTGTGTCCGCTAGAATATCCATCTTTGATGTTCTTCCAGGCTCATCTCAAATATGCTCATGCAGATTCCATCATTTCCGTTCGTACTCATGAATTAACTATCCCACAGGTGAATCAAACTCAGAAAGCCTCTATGATAGAATGTTTATTGTGTCCATGTACCTTTTTCGATGAGACTAAGTATAAGAAGCATTTAAGAAACTCTCATacatattatgtgtatattcCAAATTCTGAAGAGATGACAAAAATGAATAACGTGTGTAATCCTCCAATAACACAGACGAACATTAACAGAAGAAGCACAATTCCTGAAACAATTACTATAGATGatgtgaatattaaaaatacaacagATCAAGGAGCAACCGAAGTAACTACGCTCGATCACAAAAAGGAGAATGAGAAAATTGGTAAATTGAGAGTGAAGCCTTTTGCAAAGatcattgaaaatttatctaCGGATTCtgcatcaaaatttttatag
- Protein Sequence
- MARVQPYERVVDAVVIHTSPVLDIEIQNGTKIKNEPIDTTSNPDTTEDNTIVRNCFSLIDHDYHRDKSLSKNDNSCKDINSTENRDASNSHNAHSNDKIKTVNIERKKAKKRKKCSNEISNNKNTSALCITENVRKNKKQNSVRLDYKTKRQYKLVKKENAKCDICFRQFSSVRNCETHKQYYEFVKNNYCRFCDKHYITREKLQSHTCQSPRLYIVRMYEYNCNFCSQIFYDKILLQSHLFHVHNELICFNSTITNTSKLREISKSEIYKVNTSPKDNTLKTNANEESLCLNNLIKAEKINITLTNNINKSCDDSVIDTEQSKIEKTFNNEMTPTKRLRQPTLTEYLDLCKKKRDIKLNPNKLNIMKDESPTCTLDRVEIEENPRLKLFEEQNGQFDSLSTNKDNIPDNIPKQMASSIQKQSVKPEICLRKKPFVKLHADVEMMKSFLENLTDTVVKDKVTEDRTKNIVSNDRGIFYSLRSLNRVSSVEVSEDRTSDIVSYDRGISYNLRSLNGVSSVETSSNSEIRKNKNVSKKSPSNIEFSIKKEQNVIDSDNVDPTVGRKMIMDFKCKGCTIPLIKCDEQPRNSNTISTIEAIENTSFITTQCNFKPTTLDQESDVRNKMTFKNLEVSLERLTAIPTIDIKTETLDTNKHNNNYFLCKVCKESFSSKLAKRVHIKSSHIAYMSSICDARYTLKHKLLEHYLREHLFKQNQCCICFILLPDYEALKQHLNVHCLKYIKREDDQYPVDIELKCNLIKKNCKSIVRLHCNKTFSSQSSLIAHQSCCTVQEEMKDEKNFMEETNAYSTDISEIQHKKKTNENIITCDESINSDDLSKPSNSDSVKKSNKYQKTLHSETELKLNEEINEANRKFLVNNNSIENKIESVNESQDPKKLLENNSSTISNQNSANTQLNDITTKSMTYPCDICGKQFHNPKNLELHIRCFSVTTDICPMCRTGFSSKRLLQTHITAAHVPQISKTYNFHCVFCNQGFFKKHDLRPHILHLHGQQVLNTLTRNPNMSQEKSDKSITHVITCNICNLVFETHDRYVEHRMYYYNNHTFKCSICAQNFQGMYMYHHHNKLIHCPEDKRKSYNYICDICNEGFNHESHFYSHTVHVHSKEVNLIETTKESEDRNCNSFNVQEQIKNFPTNQQKRNEQLSNKYTCQICQVKCIDMAHMIKHKECYSNDGDFKCDKCNRRCKTSFLLDQHKKLTHFYRDIFNGHVCHICDEVLETVFALKCHEKHFHSNITNNNTDNSGQMSSSSNITYKIIERPHESKNNTSNTEYDCLFCDMKFSTSNAVQTHIVYVHMDDMIAKRTTLKLSLPIINNVDIQKQFVETVQVPSSSSSLSSSLASSSEKKTAQLLQNSTSSMIQQSKIILNNTMAKNGISVKTTELLKQFRAVHSTNKNTEKTAIPCIDRSKDNVLSCNTIASNTEPKTNISVSSSIGSTTRTDVPSTELGNNTSVPLSSGSTIFKTVVPNTASKNNTLISLSGSVKDLGRKCYENPLKSGSVNEFKANSSSNRSVIINQSKIAPVYLFSSKPLSTFKDVMPQSWKSNEITNQKSVSVNNYDHGYSCPLCPLEYPSLMFFQAHLKYAHADSIISVRTHELTIPQVNQTQKASMIECLLCPCTFFDETKYKKHLRNSHTYYVYIPNSEEMTKMNNVCNPPITQTNINRRSTIPETITIDDVNIKNTTDQGATEVTTLDHKKENEKIGKLRVKPFAKIIENLSTDSASKFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -