Basic Information

Insect: Wasmannia auropunctata
Gene Symbol: salm
Assembly: GCA_000956235.1
Location: NW:3499786-3514925[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.6e-05 0.0012 18.6 1.0 1 23 381 403 381 403 0.98

2 9 6.8e-06 0.0005 19.8 2.1 1 23 409 431 409 431 0.98

3 9 3.1 2.2e+02 2.0 3.3 3 23 795 815 794 815 0.92

4 9 2.9e-08 2.2e-06 27.3 0.6 1 23 821 843 821 843 0.97

5 9 4.1e-05 0.003 17.4 2.6 1 23 853 875 853 875 0.98

6 9 0.0084 0.62 10.1 3.2 2 23 1169 1190 1168 1190 0.97

7 9 0.021 1.5 8.8 1.0 1 14 1196 1209 1196 1210 0.92

8 9 4e-07 2.9e-05 23.7 2.1 3 23 1432 1452 1430 1452 0.96

9 9 1.4e-07 1e-05 25.2 0.9 1 23 1458 1480 1458 1480 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.6e-05	0.0012	18.6	1.0	1	23	381	403	381	403	0.98
2	9	6.8e-06	0.0005	19.8	2.1	1	23	409	431	409	431	0.98
3	9	3.1	2.2e+02	2.0	3.3	3	23	795	815	794	815	0.92
4	9	2.9e-08	2.2e-06	27.3	0.6	1	23	821	843	821	843	0.97
5	9	4.1e-05	0.003	17.4	2.6	1	23	853	875	853	875	0.98
6	9	0.0084	0.62	10.1	3.2	2	23	1169	1190	1168	1190	0.97
7	9	0.021	1.5	8.8	1.0	1	14	1196	1209	1196	1210	0.92
8	9	4e-07	2.9e-05	23.7	2.1	3	23	1432	1452	1430	1452	0.96
9	9	1.4e-07	1e-05	25.2	0.9	1	23	1458	1480	1458	1480	0.98

Sequence Information

Coding Sequence: ATGTGCGAACAAGACGAAGACGAAAGACCTGGTGATACCTCTGAGCGTATGAGATGGTGTATAACGGATCCATTGAAACTGCGCATTCACAGATTAAGGGACAACTTCCACAAGTTATCACATCGACAAATATCTAgAGAAGAAAATGACTTTACATCAGACGGTGAGGAGAGCGGTGGTGGAGGAGGAGCTGGCGAGGAAGCCGTGGATCTCACAGCGACGAGATCTCATCAGGGCGACGATGATCCTATGGAAGAGGATGAGGAAGAAGGTATCGATGAGCAAGATGAGCAGGATGAGGACGAAGAGGGCTCGCGCAAACAGATTCATCATCGACAAGACGCGGAGAACAATAATAACTTTGTGGAAAGCGGCCTGCCTACCGCTATATTCCCGCCAGCTGGAACTAGTCATGTCACCCTCGAAGCCCTGCAGAATACAAAAGTGGCGGTCGCCCAATTCGCTGCCACTGCTCTCACTGGGACAGACAGCGAAGCGGCGCTACAAGATCTGGCATTTCTGGAAAACACGCTGTGCACCCTTCAGAATCAACAGGTATTACAATTACAGCTGATTCGACAACTTCAGCAACAATTATTGATCACTCATGGGCAATCGGTAATGCAATCGTCAACGGAGCCAACTGATAACAAAGAGGCTTCGTCATCACCTATTATTCATCCGAAACCATTGTCGAGTCTCGCGTCACCTCCTTCTTCTCGTCCGCCGAGTCATCATCAGCAAACATCACCGGCGCCGCTGACGCCGAATCTGCTTCAGGAACGACCCACTTCGACGAGCAGCGCCTCTCCTTTGAATCTACCCCTATCTTCATCCGGCACGACGTCAACAGTCATCACGACCACCAGCAGCCAGGTGCCGATGCCGCATCAAATGCCGCCGCTTTGCTCGATAAGCGCTTCCCTTGCTTCATCGATCATAACGAACACCGATCCGCCTCCGCTTCACGAGCCCAATACTCTGGACATTCTTCAAAAGCGTACCCAGGAGGTATTGGATAACGCAAGTCAAGGACTAGCCAACAATTTGGCCGACGAGCTCGCGTTTAGAGGCAAAGGCTCGCGACTATCTCCTTACGATTCGAAATCAAGCGGTGGTCGCGGTGAGCCCTTCTTCAAGCATCGATGTCGCTTCTGTGGCAAAGTCTTCGGTAGCGACTCGGCGCTGCAAATCCACATACGATCCCACACAGGTGAGCGACCCTTTAAGTGCAACGTATGTGGCAGTCGGTTCACGACCAAGGGCAACCTGAAGGTCCACTTCCAAAGGCATACGGCCAAATTTCCACATGTTAAGATGAATCCGAATCCTGTTCCAGAACATTTAGATAAATACCACCCACCCCTCTTGCAGCAAATCGCTTCCGGGCAGAGACCGATGCCgtccccgccgccgccgccaccaccatcCTCTCATCACCCCCCGTTTCATCCGGCAACAACACACGGTTTCCTCCCACCACAACCGCCAATACCTCTGAGTCTCACCTTATCCAATATGACGCCCCTTTACCGATCTCCAGTTATTAATCACCGGGACGATCAAGATGTGCCGGAGAATCTTAGTAAACCCATAACCACCGTTCCACAGACATCTCCCACTTCTCCCGCTGCCATATTGAATTCTCGTCATTCCTTTCACGACAATCTCCATCAACAACATCAAAAGCAGCAACTTGAGCAGAGAGAGGAGATAAAACTCGAACAGAGATCACCCGGACAGGAGCAGTATCAACAGCGACCGATGAGTCGGGAAGGCGCCGAGCGAATAACACCGAAGAGAGAACCCGAGGAGACGGAAGAAGCCGCAGAGGAGGAGAGCGAAGATTTTGAGGAAACCACGAGACGATACCTTAATTCGCCCCAATCCGCAAATCCACCGTCCCAGCCGCAAACGTACGAGGATTGTAGCATGGACAGCAAGATCAGCGGGCGTTTAGAGGGTGACGGAGAGATGGAAGTAGACGAGGAAACAGAGGAGCAACCCGAAAATCTCTCGAGTAGAGGTACGATCAATCGTTTGCCCCAACAGATCGTGGCGTATCCAGGAGCATCGCCGGCTAGTAGTAGCGCGAGTAGCGGTAGTCTGCAGACATCTTTCGCCGGAATACTGTTTCCAGGTCCCCCGGTTCATCACCAAATTTCTCACCTTCCTGTTTCTTCGGCAGGACCAATCACGACATCCGCAAATGAAATGATTGATCCAGCCAAGGACCCAGCGATTTATTCGACTTTGTTACCGCGACCGGGCAGCAATGACAATTCCTGGGAGAGCTTGATCGAAATAACGAAAACTTCGGAGACGTCCAAGCTACAGCAACTAGTCGACAATATCGAGCACAAATTGAGCGATCCTAATCAATGCATCGTTTGCCACAGAGTGCTCTCATGCAAGAGCGCGTTGCTGATGCATTATCGCACTCACACTGGCGAACGTCCTTTCAAGTGTAAAATTTGCGGTCGCGCCTTCACGACGAAAGGCAATCTGAAAACCCACATGGGGGTGCACAGAGCGAAACCACCACTGAGAGTGTTGCACCAGTGTCCCGTGTGTCACAAGAAATTCACAAACGCTCTCGTATTGCAACAGCATATACGTCTTCATACCGGGGAACCCACCGATCTCAGTCCGGAGCAGATCCAAGCTGCAGAAGTGAACGAGTTTCCACCTGGTTATCATCCGCTGGCGTCTTTTCTCCCGCAAGGATTTCCGCCGATACATCCGACCAGTGCGGGCTTCTCCTTAGGATTCCCTCCATCTAGGCAAACGACCATCGAGCAACAATTGCTGCAAGAGAGCGACGTCGAAACGAAAGAGGAGTCTCAGCAACGACAGAGATTTATGGAGGAGCATGGCGAGGAGATGGAAGATCAGGAGGATGAAGAGCAAGATCACAGAGAGGACGACGAGAGGACGTGTGAACTGAATCGCGACAGGCGTAGCGTCGAAATCGAAGAGGAGCAGGATCACGAAAGTGAAGATACGACCGAGCACAAGGATATGACGCTTCCTATATTTTCAACTTCGTTGGCGGCGCTCGAGAACCAAGTAAGGACCATCACGACGACGGCCACGACTACAAACGTGGTCAGGTCGCCGTCCTTTCATCGGTACAACGGCAGCGAGAAGAGTACTAGCCCGCCGACTTCCGGAGCCCCACTCGACCTGACGCCCCGTGCTTCGTCCACGCCAGCGTCGGTGGCTTCAGCATCACCGACACCGCCACCCCAGATCGTGCCGCTCCATCCACCAAATCCCTTCGGCATGTTCGCGGGATTGCTGCAAGTCTCATCCGCTCCTACCACCAGCACGATAGGCACGTCGAACATGAATAGCATCACCTCGATGAGTGCCATCAACCCGGGAAGCGGGCCCGGTAGCGGACCACTAGCCTCGCTGACCACATCGGCCGTACTAGCCGCATCATCGACCTACAATCCGCTCGGCCTAGCTGTCGGAGGCCCAGCAGTACGTGGCAACACCACATGTAAGTTCTGCTACAAGACGTTCGCGTGCCAATCTGCATTGGAGATTCATTACCGGAGTCATACGAAGGAGCGACCTTTCAAATGCACCATATGCGATCGAGGTTTTTCTACGAAGAACGATGATTCCGGTCAGCAAGTATGTTCCTGCGCGGACCAACCCTTCGCCGCGAAGGGTCCGATTCTCCCACAACCCAATTCCCAATATCGCTCGTACCCGGCGAAATCGGCCGCCGGAAATAGTGAGAAACCGAAACgcaggcggcggcggcctgAGGAACGGAAGAACCGGGGGCGGACAGGAACAGGAGGGGGGCGAAGGCTGACGTCTGTTTATCCTGCCGTCCGCCTGCCCCCGCTGATGCCACCCGCCCTCGGACTTCTACCCTCGGACCACGTCTTCCTGGGTAATATGAAGCAGCATATGTTGACTCACAAGATTCGCGATATGCCGCCACATCTATTCAGCGATCCAAAGCatcaacagcagcagcagcaacagcaacagcagcagcagcaacagcagcagcagcaacaacaacagcaacaacagcagcaacagcagcagcagcaacaacagcagcagcaacagcagcagcaggaaCAAGAAACTTCCAGAAGTCCAATGTGCGTCGATGATTCAAGCCTACCACCCCCACCTCCACCACCTCCACCACCCCCGCCGATGCCACCGACGTCCCTCGAGTCCACGATACCAGTGAAAAGATCACCGGAAGGAGATCTGCCGGCACCGAAAAGACCAGCCAGCCTGCCGAGCAAGCATTTGTGCCAGATTTGCAATAAGAATTTCTCCTCGTCTTCGGCGCTCCAGATACATATGAGAACTCACACCGGCGACAAACCGTTCCGATGCACCGTCTGCCAGAAGGCGTTCACCACCAAGGGCAACCTCAAGGTACACATGGGTACTCACATGTTCACCAACGGAACGTCGCGTCGAGGCCGACGGATGTCGTTGGATATACCTCCCCTGCCAATCACGCCCAAGGACTCGGAGTTTCTGCAACGACGACCGGACCTCTTTTACCCGTATCTTCCCGCGCCATTCCTTAACGGCGTCCAGCAGAAGCTGAACGAGATTTCGGTGATTCAAAGTAGCAACGGATTACCGCCTCATTCCTTGAGCGCGGGCAAATACGCGGCGAGTCTGTTCGGCTCGGTGTACGGCGCCGGCGGGGGTGGCTTCTCCCTGGACAAACAACCGTTGGGTCCGACCAGTAACGGGCCCCTAGTGGATGGCAAGTCCGCGATACCCTCGGGATCCATGCTCTTCCAAACACCGTCGCCCTCGCATTCGCCCGGCGCATCGTCCAACGGCGGCAATCAGACGTCCGCCAGTGTGTCTTGGACCGGCGATACACTTCAGCACCATTTCGACCGGGAGACACCGAGCAGAGCCGAGAATGACGCCACACCGCCCACAGCGCGGTTACCACCGCCACCAGCGAGGGGAGAGGGATTAGCCGCGTGA
Protein Sequence: MCEQDEDERPGDTSERMRWCITDPLKLRIHRLRDNFHKLSHRQISREENDFTSDGEESGGGGGAGEEAVDLTATRSHQGDDDPMEEDEEEGIDEQDEQDEDEEGSRKQIHHRQDAENNNNFVESGLPTAIFPPAGTSHVTLEALQNTKVAVAQFAATALTGTDSEAALQDLAFLENTLCTLQNQQVLQLQLIRQLQQQLLITHGQSVMQSSTEPTDNKEASSSPIIHPKPLSSLASPPSSRPPSHHQQTSPAPLTPNLLQERPTSTSSASPLNLPLSSSGTTSTVITTTSSQVPMPHQMPPLCSISASLASSIITNTDPPPLHEPNTLDILQKRTQEVLDNASQGLANNLADELAFRGKGSRLSPYDSKSSGGRGEPFFKHRCRFCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQIASGQRPMPSPPPPPPPSSHHPPFHPATTHGFLPPQPPIPLSLTLSNMTPLYRSPVINHRDDQDVPENLSKPITTVPQTSPTSPAAILNSRHSFHDNLHQQHQKQQLEQREEIKLEQRSPGQEQYQQRPMSREGAERITPKREPEETEEAAEEESEDFEETTRRYLNSPQSANPPSQPQTYEDCSMDSKISGRLEGDGEMEVDEETEEQPENLSSRGTINRLPQQIVAYPGASPASSSASSGSLQTSFAGILFPGPPVHHQISHLPVSSAGPITTSANEMIDPAKDPAIYSTLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLSDPNQCIVCHRVLSCKSALLMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYHPLASFLPQGFPPIHPTSAGFSLGFPPSRQTTIEQQLLQESDVETKEESQQRQRFMEEHGEEMEDQEDEEQDHREDDERTCELNRDRRSVEIEEEQDHESEDTTEHKDMTLPIFSTSLAALENQVRTITTTATTTNVVRSPSFHRYNGSEKSTSPPTSGAPLDLTPRASSTPASVASASPTPPPQIVPLHPPNPFGMFAGLLQVSSAPTTSTIGTSNMNSITSMSAINPGSGPGSGPLASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCKFCYKTFACQSALEIHYRSHTKERPFKCTICDRGFSTKNDDSGQQVCSCADQPFAAKGPILPQPNSQYRSYPAKSAAGNSEKPKRRRRRPEERKNRGRTGTGGGRRLTSVYPAVRLPPLMPPALGLLPSDHVFLGNMKQHMLTHKIRDMPPHLFSDPKHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEQETSRSPMCVDDSSLPPPPPPPPPPPPMPPTSLESTIPVKRSPEGDLPAPKRPASLPSKHLCQICNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMFTNGTSRRGRRMSLDIPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSSNGLPPHSLSAGKYAASLFGSVYGAGGGGFSLDKQPLGPTSNGPLVDGKSAIPSGSMLFQTPSPSHSPGASSNGGNQTSASVSWTGDTLQHHFDRETPSRAENDATPPTARLPPPPARGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00417805;
90% Identity: iTF_01421750;
80% Identity: -