Basic Information

Insect: Wasmannia auropunctata
Gene Symbol: -
Assembly: GCA_000956235.1
Location: NW:701684-708649[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.9e-05 0.0014 18.4 0.7 1 23 143 165 143 165 0.95

2 15 0.0013 0.097 12.6 1.7 3 23 173 193 171 193 0.97

3 15 0.00036 0.026 14.4 0.0 1 23 326 348 326 348 0.98

4 15 0.14 10 6.3 0.3 1 23 354 377 354 377 0.97

5 15 0.00022 0.016 15.0 0.5 1 23 406 428 406 428 0.98

6 15 0.046 3.3 7.8 0.0 1 23 443 465 443 465 0.92

7 15 0.33 24 5.1 0.3 2 23 473 495 473 495 0.95

8 15 0.0027 0.2 11.7 2.8 2 19 503 520 503 524 0.95

9 15 0.0018 0.13 12.2 4.3 3 23 532 552 530 552 0.97

10 15 0.01 0.76 9.8 0.1 3 23 559 579 558 579 0.97

11 15 6.1e-06 0.00044 20.0 0.4 1 23 588 610 588 610 0.98

12 15 0.0026 0.19 11.7 0.2 3 23 618 638 616 638 0.97

13 15 0.0023 0.17 11.8 0.2 3 23 646 666 644 667 0.94

14 15 0.0087 0.64 10.0 0.0 1 23 681 703 681 703 0.93

15 15 0.0007 0.051 13.5 0.1 1 20 1132 1151 1132 1154 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.9e-05	0.0014	18.4	0.7	1	23	143	165	143	165	0.95
2	15	0.0013	0.097	12.6	1.7	3	23	173	193	171	193	0.97
3	15	0.00036	0.026	14.4	0.0	1	23	326	348	326	348	0.98
4	15	0.14	10	6.3	0.3	1	23	354	377	354	377	0.97
5	15	0.00022	0.016	15.0	0.5	1	23	406	428	406	428	0.98
6	15	0.046	3.3	7.8	0.0	1	23	443	465	443	465	0.92
7	15	0.33	24	5.1	0.3	2	23	473	495	473	495	0.95
8	15	0.0027	0.2	11.7	2.8	2	19	503	520	503	524	0.95
9	15	0.0018	0.13	12.2	4.3	3	23	532	552	530	552	0.97
10	15	0.01	0.76	9.8	0.1	3	23	559	579	558	579	0.97
11	15	6.1e-06	0.00044	20.0	0.4	1	23	588	610	588	610	0.98
12	15	0.0026	0.19	11.7	0.2	3	23	618	638	616	638	0.97
13	15	0.0023	0.17	11.8	0.2	3	23	646	666	644	667	0.94
14	15	0.0087	0.64	10.0	0.0	1	23	681	703	681	703	0.93
15	15	0.0007	0.051	13.5	0.1	1	20	1132	1151	1132	1154	0.94

Sequence Information

Coding Sequence: ATGGACGTCGCCGGGGATCTGAATCTACAATGGGTGGGAGACGTGGAGCTCCACGAGGAGGTGATATGCGGCCTGGAGGCGCAGCTGGTCGCGTCGGAGGAGGAGGTGATTGGCGCCTGCGAGGAGGTGGCGGTGGAGGAAACTGTGGAGTCCGTTCCAGTGGCCCCTGCTACCGAGTCTGAGATACTGATGGTACCTCAGTCGAATGACATGGAATCGATTTATATAGTGCCACAGGATCAGGGACACGACTATCTCAATATACAAGTCACCGAGGAAGTGATAGCCGACAACTGGGACAGACCCGGTCCGGACGATGGGGTCGAGATCCCAGAGGCAAAGGTGACTCATGACAATCTCCTGGAGTACGATGACATGGAGATACCGTTGCCGATCGATCAGGACTCCTACCAGAACGCCCGGCCGTATCCGTGCGACTTCTGCAGCCGCAGGTTCCGAAAGAAGGCGAATCTGATGAACCACATGGTGGCACATCAGATAGATCGGCCGTACGGCTGCAACCTGTGCGGATCCCGCTACGTACGCAAGTGCGATCTGAACAATCATCTGAAGGTCCACGCGTACGCGCCGTCCTCGCAAGATGGCCTCGAGGACGACCTGAACGACGAGGACTCGTTGGTCGCCGAGGAGGAGGATGTGGCGACCAGTGGTAACAAAGGCAGGCGCAAGAAGGTGCAGTCGAGTGCGCCGCGCAAACGGAAGAACAATACCGCCGCCGGTGTGCCGAAACGCAAAACCGAGGAGCTTAAGATGGAGATGGGCAAGTATGTGTACGAGCCAGACATTGATTACACGGACACGCTATTAGCCTACGTAGACGAGACGCTGACCGACGATTGTTTTGCACGCAGCGGCAATTTTGCATCTAGCTCGAGGTGGCAGGTGGAGCAGATGTCATCTGCTACGGGCAGACAGCAGCCGCAACAGTGGCCTATCACCGATCCAACAAAGCCATACGTCTGCCAGTCGTGCGGTATCGGCTTTGCTAGGGAGAAGGCACTGGCGTCGCATGCTCGCGTTCACGGTGGCGACAGCCCATTCGAATGCACCTCGTGCAGCGAATTGTTCTGGGATGCCAACAGTCTGCGGGAACACGTGCGTATGAAGCATGGTGGTACTGTTACGCAGATATCCGACGCAGAGGAATATGACAATGACGCCACTTACGCGGGCGACAACGAGAGGCTCGGCGAGTTTTATTGTAAGGTCTGCGCGGTACCGTTCCAACGTTTGGATCTACTCAAACGCCATCAGAaAATTCACAATGTGAAACCAGATATGGATACAATGGAGTCCAGTCAGCATCATATGTGCAATGTTTGTGGAGAGCAATTCGAGGAGGCTCTAGCACTATTGGCACACGCAGAACTTCATGCTTCAAGATCTCCTAGTCGTCGTTGCCTGTTGTGCGGAGCGAGATGCCGTGATGAAGCAGAAGTCGCGGAACACGTGCGACAGAATCACGCTGAAGATGCACCGCCAAACACGTGTACGCTCTGTGGAAAAACATGCAAGGATAAGCGCAGTTTACTGAAGCACTCGTGGATACATAACGTCGATAAGACTTTTGGTTGTACAAAGTGCTCGAAACGCTTCCACAGTAAAGCTCGATTACGAAGACACATGGTGTCACATCGCAACAAGATGGTAGCTTGCGATGAATGCGGCGAGGAATTCCCCGACGGGCGGGCACTCGTAAGTCATCGTCATTCGCATAACAGGGAACTGGGTGGCCGTTCCTTCCCATGCCGGGAGTGCGGGAAAACCTTTGGTAGTCGCAGTTCACAGCAGATTCATATACGTATCCACACCGGCGAGAGGCCCTACGGTTGCCGATTCTGTTGGAAGGCTTTCGCAGACGGCGGCACCTTGAGAAAACACGAGCGCATCCACACTGGCGAGAAACCATACGGATGCGCGATCTGTCCTCGGGCATTTAATCAGAGAGTGGTTCTTCGAGAACACGTGCGCGCTCATCATTCCGGTCCGGATCCAAAATGCGTGGGCAGTGCGACACCGTACTTGTGCAAAGTATGCGGCGAGTCGTACGGCACGTCCGAGGAAATAGTGGCGCATATAGTGCAGCATTGCGACGACAACACTGCGTTGAGACGCCAGCCGCAGACTGGTCCGCGTAAATACAAGAGAAGACGCAAAACAAAGCCACTTGAGACGAATGCTGCAGCGGCACGTAGAAACGAGTTTACGTACGACATGATGGAAggtagcggcggcggcggtgtcACCGGCGTTACCGGCGCCAGTACTGGCAGCGGTACCGTCGGTGGCAGTGGTACTGTCGGTGGTGGCGCTGGCACTGGTGGTTCCGATTCGGAGGACAACACGAAGCGGAAACTTGGCAAGAAGAACAAGCAACATCGGTCGAACGTGGTCGAGGAAGGCTATCAGAATGTGTTGAAAAGTTTTGAAAGCTCTCTACAGAACATAAACTCGATCGTGAGTAACTCCAAGTTAAATGCATCCAAATCGAAAGTCTCGAAGAAGAAGCTGCGCAAGGAGGAGAAGAAGCAGGAAGCGCAGGCGTCGAATCAGTCGGGCCGACCGAAGATGATACACACGCAGAAGACGCGGGTGCCGGTGGAGATGGGTAGCGATGGCGCGAAGAAGGGTCAGAAGACGAAGACGATGGTGACCCGTACACCAAAGGTGATGCCGAACGAGCATAAGGCCGGCATTTTTCCGGGTGGCGAGCGGAATCGGCCGCGCACAAAGAACGTCAGTTACCACGTTGAAGGTAAATCGCAGATCGCGCCGGCGACGTTCCCGGCGAAATCGGCGAAGGAGGATGCGTCTACGGTGTCGCAGCAGCAGCTGTTACTGGCGAATGTCAAGCAGGAGCCAAGCGTGCAAAAGACCGCGGGTGACAGTCACAGGAACAACAATGGTAATATCCTAGCCCTCAATAAAACTCAGCCATCAAACAAGAGGAAATCGTCGGCCACCACGAAGAGGACTAAAAAGCAGAAGCAGACAGTGATGAAGCGGGAAATGAACACGTCGATAGAAATAGCTGCGGAagagcaacagcagcagcagcagcaacagttACAATTAcggaataataataacaatactATGGAGAACAGCGACGATCCAGTACAATTGATTCATCATGCGGTGGACGGCAACAACCTGGAAGTAGCGTTTGAAGCGAGCGTTGTCACCGCTCAAGACGACGAGGTCGAGAGCATATTGCCGCACAACGCTGATCAGGATATGGGCAATGGGGACAACAACGTTAAGCTTAGTGTCAAGGTGGAGTCGACGCCACAGACGAGGATGCTTGCCGTACATAGTGTTATCGCGCCGGTGGACAATGTCCCGGAAACGATAATACCGGACACGGTGGAGTACACGTGCGAGATGTGCGACATGCAATTCTCCAGCCGTGCCGAGTTATTGGTGCACGTGCCGGTACACATTTGA
Protein Sequence: MDVAGDLNLQWVGDVELHEEVICGLEAQLVASEEEVIGACEEVAVEETVESVPVAPATESEILMVPQSNDMESIYIVPQDQGHDYLNIQVTEEVIADNWDRPGPDDGVEIPEAKVTHDNLLEYDDMEIPLPIDQDSYQNARPYPCDFCSRRFRKKANLMNHMVAHQIDRPYGCNLCGSRYVRKCDLNNHLKVHAYAPSSQDGLEDDLNDEDSLVAEEEDVATSGNKGRRKKVQSSAPRKRKNNTAAGVPKRKTEELKMEMGKYVYEPDIDYTDTLLAYVDETLTDDCFARSGNFASSSRWQVEQMSSATGRQQPQQWPITDPTKPYVCQSCGIGFAREKALASHARVHGGDSPFECTSCSELFWDANSLREHVRMKHGGTVTQISDAEEYDNDATYAGDNERLGEFYCKVCAVPFQRLDLLKRHQKIHNVKPDMDTMESSQHHMCNVCGEQFEEALALLAHAELHASRSPSRRCLLCGARCRDEAEVAEHVRQNHAEDAPPNTCTLCGKTCKDKRSLLKHSWIHNVDKTFGCTKCSKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNRELGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCVGSATPYLCKVCGESYGTSEEIVAHIVQHCDDNTALRRQPQTGPRKYKRRRKTKPLETNAAAARRNEFTYDMMEGSGGGGVTGVTGASTGSGTVGGSGTVGGGAGTGGSDSEDNTKRKLGKKNKQHRSNVVEEGYQNVLKSFESSLQNINSIVSNSKLNASKSKVSKKKLRKEEKKQEAQASNQSGRPKMIHTQKTRVPVEMGSDGAKKGQKTKTMVTRTPKVMPNEHKAGIFPGGERNRPRTKNVSYHVEGKSQIAPATFPAKSAKEDASTVSQQQLLLANVKQEPSVQKTAGDSHRNNNGNILALNKTQPSNKRKSSATTKRTKKQKQTVMKREMNTSIEIAAEEQQQQQQQQLQLRNNNNNTMENSDDPVQLIHHAVDGNNLEVAFEASVVTAQDDEVESILPHNADQDMGNGDNNVKLSVKVESTPQTRMLAVHSVIAPVDNVPETIIPDTVEYTCEMCDMQFSSRAELLVHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00730239;
90% Identity: -
80% Identity: -