Basic Information

Insect: Wasmannia auropunctata
Gene Symbol: -
Assembly: GCA_000956235.1
Location: NW:14336-21048[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.9e-05 0.0021 17.8 0.5 2 23 305 326 304 326 0.97

2 11 9.1e-06 0.00067 19.4 1.7 1 23 334 357 334 357 0.98

3 11 0.0016 0.11 12.4 1.6 1 23 403 425 403 425 0.98

4 11 4.3e-07 3.2e-05 23.6 1.5 2 23 480 501 479 501 0.97

5 11 5.5e-05 0.004 17.0 1.1 1 23 506 529 506 529 0.95

6 11 7.7e-05 0.0057 16.5 0.2 1 23 567 589 567 589 0.97

7 11 7.4e-07 5.5e-05 22.8 1.7 1 23 599 621 599 621 0.96

8 11 1.3e-06 9.3e-05 22.1 0.9 1 23 627 649 627 649 0.99

9 11 8.5e-06 0.00062 19.5 0.2 1 23 655 677 655 677 0.98

10 11 3.5e-05 0.0025 17.6 4.5 1 23 683 705 683 705 0.98

11 11 0.00098 0.072 13.0 0.5 1 21 711 731 711 732 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.9e-05	0.0021	17.8	0.5	2	23	305	326	304	326	0.97
2	11	9.1e-06	0.00067	19.4	1.7	1	23	334	357	334	357	0.98
3	11	0.0016	0.11	12.4	1.6	1	23	403	425	403	425	0.98
4	11	4.3e-07	3.2e-05	23.6	1.5	2	23	480	501	479	501	0.97
5	11	5.5e-05	0.004	17.0	1.1	1	23	506	529	506	529	0.95
6	11	7.7e-05	0.0057	16.5	0.2	1	23	567	589	567	589	0.97
7	11	7.4e-07	5.5e-05	22.8	1.7	1	23	599	621	599	621	0.96
8	11	1.3e-06	9.3e-05	22.1	0.9	1	23	627	649	627	649	0.99
9	11	8.5e-06	0.00062	19.5	0.2	1	23	655	677	655	677	0.98
10	11	3.5e-05	0.0025	17.6	4.5	1	23	683	705	683	705	0.98
11	11	0.00098	0.072	13.0	0.5	1	21	711	731	711	732	0.94

Sequence Information

Coding Sequence: ATGGCAGTCCCGAGCGATGACGCGATGGTGAATAGCACGGCCGCAGACGCCTCGGGACGGCTCGTGGGCGACGAGTGCCGCATCTGCCTCAAGTCCTGCACGGAGGCATGCCAGCTCTTCCGCGACGGCGGTATATCGGAGAAGCTGATGGCCCTCGCCGCCGTGCAGGTGGAGGAAGGAGACGGTCTGCCAGCTTATATCTGTTTGGCTTGCAATCATTTGCTTGACGTGTCCTACGACTTCCGATGCCAGATTCAGAATTCCGACGTGAGGCTACGGCAGATCCTGAAGCTACAGGTTCAGCCTATGCTGCAAGATAAACATGCGAAAGATGCCATGATAATCAAGGATATCGCAGATGCCGTATCCGACGTAGTGTcttgtaaaaaagataatcaCGTCTTAGAGCAGGATATTTATGTCTCGTCTCATGATATTGTTATGTTCGACAGTACTGCCGTTCAGTCTGATGCGGTGATTAACGATGAATCTCACATAAGTCACAAGTTTATGGAAAAGACGGAGGAAATTGTAGAGCCAAGTGAAAAGGATGCGCTGCTGCATGTTAAAGAGAATGTACATAACGAGGTAATTCAAGTGTCCTTGTGTCATGAGGCACATATGGATGATGCGATTGCCGATCATTCGGATCGACTGTCCAGTTCAACAACAGAGGACAGATGCGTCAAGCAAGAGGAATTGATGATACCTGAAGATAATGAGACATCGGGAAACTTAATGGACGAAAATCGGGAAGACACATTGAAGATTGAAGTTAGGAATGACATGTTGGAGAACTTCAATGACCACGACGTGACGAAGGAGATGCTGGAAACGGACAATCAGGACGCGAAAGGCGTCGCGAACTGCAGCGACGACGAGGAGAAGCCGCTCATAAGCAGGACCAGACAGAAGTGCCTGTACTGCATCAAGTCGTTCGCGACGAAGGTGGCGTTGCAGCGGCACATGAACGTGCACAAGCACAAGACAAAGCTGCGTTACGTGTGCGTCGTGTGCGACAAGCAGTTCTCGAATATCGACAAGTTGAAAAGCCACATGCTCACGTGCCACGAGACCCAGGCGACCCAGGATGGTAAAGCGACGCAGGACGACAAGAAGGTGAATAAAGTGTCGGCGAAAGTCACTAGAAGCGGCAACCATGTGGTGGTGGTGGACGGCACGagggaggagaagaagaaCTTCAAGTTCACGTGCAAGGTCTGTGCGAAGCAATTCATATATCAGAAATCCTTTGTGTCTCACGCCAAGAGCCATCCCGAGTACAATATGGACAACACCGAGGACGTGCACGATCAGTCCGCGAATAATATGACGAGCGAGCAGAAAGAGAGGATGCCAATGTTCAGGGAAAACGAGTccgaggaagaggaggaggaggaggatgacGACGACAGTGATTTGCCGATCGAAAGTTTACAGTGTACTCAGTGTGGCAAGCTTTTCGCTACGAAGAGGAATCTGAAGAGGCACATCTCGACGCATAGCGGCTTGAAGTTCAACTGCTCGACGTGCGGGAAAGGATTTTCGAGGATCGACAAGCTGAAGGATCACGAGCAATCGAAACACAAAGAGGAAATATTCGGCAACaccgacgacgaggacgatgACGAGGAGGATAACGAGAGCAAAGTCAACGAGAATTCCGAGAATCGAAAGAAGGACCGACACAACAGGCCGCACAAGTGCGCGCTCTGTCCAAAGGCGTTCGCGCAGGCTCAATCTCTGGCAAACCACGTGGAGAGGCATAAACGGGTAAAGGACACGCAGAAACGGTTTCTCTGCGAGAAATGCAGCAAATGTTTCGCTCAGAGTGGCTCGCTGGTGGCGCATATGCGCACGCACACCGGCATCAAGCCGTACGTGTGCAACGTGTGCGAGCGTGCCTTCACCAAGAGCACGTATCTGCAGCTGCATCTGCGAACTCACAGCGGTGAGAAACCGTACATCTGCCAGTACTGCAGCAGGGCGTTCGCCCGGGCCAACACCCTGGCGCGGCACATCACGATGCACACCGGCGAGGCCAAGTATCACTGCAACATCTGCACCAAGTCCTTCCGACGGTTGACCTCGCTGAACGAGCACACGTACACGCACACCGGTCAACGGCCGTACGCGTGCAAGCTCTGCACAAAGAGGTACAATAACGCCGGCTCGCTGTACGCTCACACGAAGAAGTGCAGGGCGCAGCAGTTGTCCAGCTCGACGACGACCGCGTTCGCGGTGTCCACGGCGGACAGCGCGCCGCAGCAGAACGACGCGTCCATGCCCCAACTGCTGATCTATTCCCAGAGGAAGTTGGAAGAGGCGACCGTCGGTCAGGTCGTGTCCACGCCGCAGTACATGGTAACAAATGTGCACAATCAAAAAACGGTGCCAGCCAACGTGATCCAACCGTTCACTGTCGAGGACCCGAATGTGTATAATTCAAAACAGTTTAAGAACTCGTATTACGCTATTTATCCAAACATGCAATAG
Protein Sequence: MAVPSDDAMVNSTAADASGRLVGDECRICLKSCTEACQLFRDGGISEKLMALAAVQVEEGDGLPAYICLACNHLLDVSYDFRCQIQNSDVRLRQILKLQVQPMLQDKHAKDAMIIKDIADAVSDVVSCKKDNHVLEQDIYVSSHDIVMFDSTAVQSDAVINDESHISHKFMEKTEEIVEPSEKDALLHVKENVHNEVIQVSLCHEAHMDDAIADHSDRLSSSTTEDRCVKQEELMIPEDNETSGNLMDENREDTLKIEVRNDMLENFNDHDVTKEMLETDNQDAKGVANCSDDEEKPLISRTRQKCLYCIKSFATKVALQRHMNVHKHKTKLRYVCVVCDKQFSNIDKLKSHMLTCHETQATQDGKATQDDKKVNKVSAKVTRSGNHVVVVDGTREEKKNFKFTCKVCAKQFIYQKSFVSHAKSHPEYNMDNTEDVHDQSANNMTSEQKERMPMFRENESEEEEEEEDDDDSDLPIESLQCTQCGKLFATKRNLKRHISTHSGLKFNCSTCGKGFSRIDKLKDHEQSKHKEEIFGNTDDEDDDEEDNESKVNENSENRKKDRHNRPHKCALCPKAFAQAQSLANHVERHKRVKDTQKRFLCEKCSKCFAQSGSLVAHMRTHTGIKPYVCNVCERAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCNICTKSFRRLTSLNEHTYTHTGQRPYACKLCTKRYNNAGSLYAHTKKCRAQQLSSSTTTAFAVSTADSAPQQNDASMPQLLIYSQRKLEEATVGQVVSTPQYMVTNVHNQKTVPANVIQPFTVEDPNVYNSKQFKNSYYAIYPNMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01476429;
90% Identity: -
80% Identity: -