Basic Information

Gene Symbol
-
Assembly
GCA_000956235.1
Location
NW:811378-815742[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.26 2.1e+02 1.6 0.0 2 17 160 175 159 177 0.90
2 6 0.22 1.8e+02 1.8 0.0 22 46 217 243 206 243 0.73
3 6 6e-13 4.8e-10 38.8 0.3 1 45 249 295 249 296 0.95
4 6 6.1e-08 4.8e-05 22.8 0.5 3 44 304 349 302 351 0.95
5 6 6.9e-11 5.5e-08 32.2 0.0 1 45 357 402 357 403 0.94
6 6 1.6e-12 1.3e-09 37.5 0.2 4 44 414 454 412 456 0.95

Sequence Information

Coding Sequence
ATGAGCGAATCCGACGACTCAGACATCCTAGCTGATATCCAGGCTCTGGATGAAGCTTTAGCCTTGAAAACGAATACAAATTCCCAGGAATATGTTTGCAGCGGCCATCGATCGGACGTCTCGTCGGACGTCGACCTCGAGGGAAACGATCTTGAGGTCGACTACTCCGAGTATCTCGGTAACAATCAGCACATCGACGAGTCTCTGAACGCTTACGAGATTAATTTGAAGTTGATCATGGGCTTGACGATAGCCAAGAGGAAATTGACTGCAATGCTCGAGGAGTGTGAGCAGAAGATAAAGCTACTGGACGAGAGGACCAACTCCAGGGAGTTGAGCTCATATTCCAAATTGGCACTCAGCAACGCCGGTATTCCGTACTTCAAGGACAAGGATAACTTCAGCGCGCCAAAAAACTACGACACCAAACTGAAGGAAGCCCGTGGTGAGCTGTGCCCTTTGTCTGTAAAGAAGCCGAATCGCTGGTCCAGTAAAGACAGAGACAAACTTTTAGAAGCCATACACGATCAACTTACCGAATCGAATGAAAAAGAGGCCGATGAGCCTAATGATCCAGctaagaaaatgaaatttgagCTCCCCATAAATTTCGACGAGAAGGTAGGCGCGTTGGGTGAGAGAGAATTCGATTGGTACAAGATTTCTGTTATGACTTTCATCAATAAACATTCACCGGGCGAATGCAGGTCCATGTGGAATATCTACCTGCACCCCGACTTCCGGAAAAGCGAATGGACGAGCATGGAGGATAAGAAATTGGTGAGGTGCGTGAGAGAATATAGATTTCAAAATTGGGACGCTATTACGGAGAAACTGGGAACAAATCGTAGCGCGTATCAATGTTTCATTAGATACAACACCATAAAGAAGGTGCCGTTAGCCGGGCGTGCCTGGACCAGGCAGGAGGACAAGCATCTCTTGAAGATAATGAACGCGGTCAAAGTCGGAGACTACATCCCCTGGTCCGAGGTCGCCAATCACCTGCGACACAGAACCAAGCAACAGATTTACGTACGATGGATGTACAGAAAAGCGCCGCATTTGCGAAAAGGCAGATTCACTTACACGGAAACGATAACCCTTCTGCAGGCGGTGCAGAAGTACGGCGAGAACTTCTGTAAGATTTCGAGCAACATAATGCCAAATCGGACCTCGATACAACTCCAAGAGCGTTATAATACGGTGATGTTGAACATGAATTCCAACAATTGGAATTTATGGTCGCTCAACGACGATGTGACATTAATTAATCTGCACTTGAAATTCAATAACAATTGGTCCAAGATAGCCAAGTATTTTTCCAACAAGACGAGGACCCAGGTGAGACATCGGTATAACGCATTACTGAAGTACGTAATGAAAGGTGTcagtattgaaaatatacCCAGACCGCCCGCCACGATGCGCAACAGAAGATACataaggaataaaaaattgtccaagGGCGCGGAAAAagttcataataaaattaaattgcacgAAATGGAACACACTGTAAATATTCTTGATATCGAATTAAGGTTGTACGAGAATCTTTGTTTTCCACCTTTAGTTAAACCGAATAATTCTGAAGAGGAACCTTACGACATCGAAGAGCTTGCGCGCGATACTAGAAGATTGTACAGCACGTTGAATTTGTTGAACGCCAATCTTGATATTCCGTCTGATTTTCTGAAATACGTGCAGTTAAATGACAAAGAGAAAGAACTTTTGGTCTCTTTAAAGGAACACATGAACGTAAGAAGCGTCGGTGTACGGAACGACGAAATAACGGAGAATTATAGAACGCGAATGTTTGGCTACGCCTCGGAAGTTAGTCAAGGTGATTTCTTTATACCGCCACTTCCATTTGACGGATACGTAAGGGtcaaaaaaattcaacaaaaacGAAACGACACGTCTATAGACTACGATTTGGACGTTAgcaaaaaatttcttgttgACGTGCCCGCAGATTTCCATGTAACTGCCTGTACACTTCATTTCGTTAGCAGCGACGAGGAAATGCAGTTTCGCAAATTTGGTCAGTTCTTAATAAGCGATTACCGTGATTATTACCagcaaaatgtaaatttgtataaGTCATTAAAATGTATCTCTTCTTGTGCTAGAAGAAGCCCTTCGAATAAGGCTTCGTCGAAACGTGATAAGCTGGATACGAGTTCGAAGATAACTGTAAAAGATTACGAACAAacggaattaaataaattgaggGAAACTTCAGTCGGTAACAATGTTAAAGAGGAGAACGAAGAAGCGATGGATAACATAATTCGGCCAAATCAAGCGACTTTATTAGGTTTGAAGAACTTGTTTCTCTGGAAATTACTGTACGACTGTCAATATGAGTCCCACGCGCGATGTAAACTGATTGCGTCGTTCGAACGTAACTCGAGGTCGAAACAAGCGGTGACGAATTCTCGACGACCTGTGCAAACAGAGAGTGCCGAATACCAGTTACTGCGAACTCGCCTACTGCAATTGTTTAAACTTCCCATAGGTTTGTCGAGAACCACGTTGTATGTACAGGGACCCGACCAGATATTTGTACAAAAGGAGAAGCCTCGAAAAGTTATTCTTTCGACTATTTCAAGGAAAAGACAATTTAAAAACTGTGCAGATTACGAAGATATGACTCATTTGAAACGAAGTAAAAAAGATGACTCAAACGTTTCGGTTAATAACGATTCTCAACCCACCTCGGATCCTACAACGGAAAATCTACCTAGAGCACGCAGTTGCAGAGTAactcgcaaaaaaaataaaactgcaaAATAA
Protein Sequence
MSESDDSDILADIQALDEALALKTNTNSQEYVCSGHRSDVSSDVDLEGNDLEVDYSEYLGNNQHIDESLNAYEINLKLIMGLTIAKRKLTAMLEECEQKIKLLDERTNSRELSSYSKLALSNAGIPYFKDKDNFSAPKNYDTKLKEARGELCPLSVKKPNRWSSKDRDKLLEAIHDQLTESNEKEADEPNDPAKKMKFELPINFDEKVGALGEREFDWYKISVMTFINKHSPGECRSMWNIYLHPDFRKSEWTSMEDKKLVRCVREYRFQNWDAITEKLGTNRSAYQCFIRYNTIKKVPLAGRAWTRQEDKHLLKIMNAVKVGDYIPWSEVANHLRHRTKQQIYVRWMYRKAPHLRKGRFTYTETITLLQAVQKYGENFCKISSNIMPNRTSIQLQERYNTVMLNMNSNNWNLWSLNDDVTLINLHLKFNNNWSKIAKYFSNKTRTQVRHRYNALLKYVMKGVSIENIPRPPATMRNRRYIRNKKLSKGAEKVHNKIKLHEMEHTVNILDIELRLYENLCFPPLVKPNNSEEEPYDIEELARDTRRLYSTLNLLNANLDIPSDFLKYVQLNDKEKELLVSLKEHMNVRSVGVRNDEITENYRTRMFGYASEVSQGDFFIPPLPFDGYVRVKKIQQKRNDTSIDYDLDVSKKFLVDVPADFHVTACTLHFVSSDEEMQFRKFGQFLISDYRDYYQQNVNLYKSLKCISSCARRSPSNKASSKRDKLDTSSKITVKDYEQTELNKLRETSVGNNVKEENEEAMDNIIRPNQATLLGLKNLFLWKLLYDCQYESHARCKLIASFERNSRSKQAVTNSRRPVQTESAEYQLLRTRLLQLFKLPIGLSRTTLYVQGPDQIFVQKEKPRKVILSTISRKRQFKNCADYEDMTHLKRSKKDDSNVSVNNDSQPTSDPTTENLPRARSCRVTRKKNKTAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-