Basic Information

Gene Symbol
onecut
Assembly
GCA_000956235.1
Location
NW:992857-1081053[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6e-38 3.6e-34 116.1 0.5 3 78 359 434 357 435 0.97

Sequence Information

Coding Sequence
ATGTCTTCGTCGGCCTCTCAAAGCCCCGACATCGCGTGCGCGAGCCTACCGCTGGAACTGCTCGCGGCTGGCGCGCTCGGCGTCAAGGAGGAGCGAGACCTCGCCGCCGCGGAGGATCTGTCGTCGTCCCAGGATCCGCCtggcaggCAGAGCGCGCGGGAGTCCCTGTCGGTGATCGTGCCGCCTCAGGACGTGGACGTGGACTCGCGCGACGCCGACGACTCGGAGCTCCTCAGTCCGGGCAAGCTAACGCCTACGTCGGGGATCAGCGTGTCGGTCGCGAGCATGATCGACGCGACGGACTTCAGGGCGATGCAGCCGGAGCCGACGTATCAGACACTGACCTCGGTGGCCGAGAGGATGTCGCCGCCCGGCTTCAGTCCGGGCTCGTCGTACGCCACGCTGACGCCGCTGCAGCCGTTACCGCCGATCTCGACTATGAGCGACAAATTCGTTTACGGCGGTCACGCGGCCGGCGGCGTCACCGGTAGCTTCGCCGTCATGCAGAACAACGGCCTGGGTAACATCGGCCTCGGTATGGGCGGCTCGCCATACGCGTACGACAAGCTACCTACGATGGGCATGTCGCCGCCGCACAATTATCCGTCGCCGGGCGCGGGATTGCAACCGAGTCCGCTCTCGCCGCAAAGCGCGTACAGCCAAAGCGGCCTTAACTCGCCGCACAAGTCGTCCGCGAGTCCGCATTACGACCCGGCTTTTCTGCCGCGGTTACAGCAGAGCCCGGCGGCGCTTAGCCCGTCCTCGCCGCCGGCCACGGCGAGTTTCGCGCCATCGCATCATTCCCCGCCCGGCACGCATTCGGTGCCGAGCGCGGCATCACCGCCACCGACCATGCAGACGCAactgcagcagcagcagcagcagcagcagcagcaacagcagcagcagcaacagcagcagcagcagcagcagcaacaacagcagcagcagcagcagcagcagcagcagtcgATGCCGCAGCAGCAGACGATATCGCACACGCAGCACGTGCAACACACGTCGGTGGTGATGAAGACGGTGTCGGCGGCGGGCAACGGCGGCGCCGGCGAGGTCGAGGAGATCAACACGAAGGAGCTCGCGCAGCGTATCAGCGCCGAGCTCAAGAGGTACAGCATACCGCAGGCGATCTTCGCGCAGCGGGTGCTGTGCCGCAGCCAGGGCACCCTCAGCGACCTGCTGCGCAACCCGAAGCCTTGGTCCAAGCTCAAGAGCGGCCGCGAGACCTTCCGACGGATGTGGAAGTGGCTGCAGGAGCCCGAGTTTCAGAGAATGTCGGCCTTGCGGCTAGCAGCCCTGAGCAACTGCTCTGAGAGCGGAGGCGAGCCGGACGCCATGCTGGACATGCACCACCCAGGAACCGGGATCGACTCGCACCATCCGCAGTTTCACAACTCCTATGCTGCACAGATTCCACAACGCGGAACATGCAAGAGGAAAGACGAGATGGCGAACCAGGCAGAACACCAACAGCCCGCCCCCAAGAAACCGCGGCTGGTTTTCACAGACCTTCAGCGCCGTACTCTACAGGCTATTTTTAAAGAGACCAAGAGGCCGTCGAAGGAGATGCAGGTGACAATCGCGAGGCAATTGGGCCTGGAACCGACGACGGTCGGGAACTTCTTCATGAACGCCCGACGCCGCTCCATGGACAAGTGGAAGGACGAGGACCCGAAGACGGTCGCGGTCGAAGAGGAACAGTTGTCGCCCACGATAGGAATCGGCCAGCGCCAACCGAGCGACGTTTTGTGA
Protein Sequence
MSSSASQSPDIACASLPLELLAAGALGVKEERDLAAAEDLSSSQDPPGRQSARESLSVIVPPQDVDVDSRDADDSELLSPGKLTPTSGISVSVASMIDATDFRAMQPEPTYQTLTSVAERMSPPGFSPGSSYATLTPLQPLPPISTMSDKFVYGGHAAGGVTGSFAVMQNNGLGNIGLGMGGSPYAYDKLPTMGMSPPHNYPSPGAGLQPSPLSPQSAYSQSGLNSPHKSSASPHYDPAFLPRLQQSPAALSPSSPPATASFAPSHHSPPGTHSVPSAASPPPTMQTQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSMPQQQTISHTQHVQHTSVVMKTVSAAGNGGAGEVEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAALSNCSESGGEPDAMLDMHHPGTGIDSHHPQFHNSYAAQIPQRGTCKRKDEMANQAEHQQPAPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDEDPKTVAVEEEQLSPTIGIGQRQPSDVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00625403;
90% Identity
iTF_01087112;
80% Identity
iTF_01523267;