Basic Information

Gene Symbol
kn
Assembly
GCA_000956235.1
Location
NW:1690384-1765809[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-232 1.2e-228 759.5 2.6 39 535 20 506 16 546 0.90

Sequence Information

Coding Sequence
ATGAGGCAGATACTGAAGGAGGAACCTGTGCCACGTGCTTGGCCGCAGCCCGCGCTCGCCGACAACGGAACAGTTGGCGTGGGCCGAGCGCACTTCGAGAAACAACCGCCGAGTAATCTGAGGAAGagcaattttttccatttcgtAATCGCTCTTTACGATCGACACGGCCAACCGATCGAGATTGAGAGGACGTCGTTCATGGGCTTCGTCGAGAAGGATCAGGAGTCTGAAGGCCAAAAGACGAACAATGGCATTCAGTACAGTCTACATTTGCTCTACTCCAATGgtGTCAGGCAGGTGCAGGATATCTACGTTAGGCTTATAGACTCCGCGACGAAACAAGCAATTATGTACGAGGGACAAGACAAGAATCCGGAAATGTGTCGTGTTCTGCTAACGCATGAAGTCATGTGCAGCCGATGCTGCGATAAGAAGAGCTGCGGCAACAGAAACGAAACGCCCAGCGATCCTGTCATCATCGACCGATTCTTCCTCAAGTTCTTTCTCAAGTGTAACCAAAACTGCCTCAAGAACGCCGGCAATCCACGTGACATGAGACGCTTCCAGGTGGTCATATCTACACAAGTGGGAGTGGAAGGACCATTACTAGCGGTCTCGGACAATATGTTCGTCCACAATAACAGCAAGCACGGACGCAGGGCGAAACGTTTGGACCCCAGTGATCCTAGTGAGTACAATAGTTTATATCCGCCAATACCTCTCCAAACGCCGTGCATAAAAGCGATATCGCCTAATGAAGGCTGGACGTCGGGTGGATCCACCGTTATAATCATCGGTGAAAACTTCTTCGACGGATTGCAAGTAGTTTTCGGATCGATGCTAGTTTGGAGCGAGTTTATCACGCCACACGCGATCAAGGTGCAGGCACCGGCGCGACAAATACCCGGAGTCGTCGACGTCACGTTACATTACAAAAGCAAGCAATTCTGTAAAGGAGCGCCCGGTCGATTTGTCTACGTTTCGGTAAACGAACCCACGATCGACTACGGCTTCCAAAGGTTACAGAAACTCGTTCCGCGGCACCCCGGTGACCCCGAAAAGCTTCCGAAGGAGATAGTGCTGAAGAGGGCGGCGGATCTAGCGGAAGCCATTTATAGTATGCCCAAGAGCGGAAACATGGGGATCGCGGGGGCACCGAGGAGTCCGGGTTCAGTGCACGCACCCGTACCTCCTACATCCACTTCGGCAACGGCCTTTAATTCGTACACAGGGCAACTTGCAGTGACGGTGCAGGAAAATGGTAGCGCGGCAAAATGGACAGACGACGGTAGTTCCGTGACGACAGGAGCTGCTGCTGACggaggaggcggcggcggcggcggcggcggcggcggtggcagcgGTGGTAGTGTCGGAGCCAACGTCGGCGGTAGCGCCGACGCCTATAGACAAAGCAGCAGCGCAAGTCCACGTGGTGTCGTAACCGGCAGTGGTTATTGCGGTAGTTCAGCCAGCACACCACACAGTCACAGTACTAACGGAAGTTATTCCGTCGCCAATCCGTATACCGGCAGCCCGACTCTCTACACCTCGCGATTAGGAGAGGTGGTCGGATCACCATTCAACATGAACCCATTTATGTTGCCCACCTGCAACCAAGGATACTCAGCCGCTGCCAGTCCGCTGCTTTCGTCAAATGGCAAATAG
Protein Sequence
MRQILKEEPVPRAWPQPALADNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFMGFVEKDQESEGQKTNNGIQYSLHLLYSNGVRQVQDIYVRLIDSATKQAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPSEYNSLYPPIPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSEFITPHAIKVQAPARQIPGVVDVTLHYKSKQFCKGAPGRFVYVSVNEPTIDYGFQRLQKLVPRHPGDPEKLPKEIVLKRAADLAEAIYSMPKSGNMGIAGAPRSPGSVHAPVPPTSTSATAFNSYTGQLAVTVQENGSAAKWTDDGSSVTTGAAADGGGGGGGGGGGGGSGGSVGANVGGSADAYRQSSSASPRGVVTGSGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSRLGEVVGSPFNMNPFMLPTCNQGYSAAASPLLSSNGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00879410;
90% Identity
iTF_00142224;
80% Identity
-