Basic Information

Insect: Volucella zonaria
Gene Symbol: ZNF438
Assembly: GCA_963966105.1
Location: OZ014532.1:163852285-163862442[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.6e-05 0.012 17.9 1.8 1 23 220 243 220 244 0.95

2 13 0.00047 0.16 14.4 0.9 2 23 250 272 249 272 0.95

3 13 0.15 51 6.6 0.1 2 11 280 289 279 299 0.89

4 13 0.0011 0.38 13.3 3.0 2 23 319 340 318 340 0.98

5 13 0.15 50 6.6 2.2 1 12 346 357 346 372 0.78

6 13 0.066 23 7.7 5.3 2 23 378 399 377 399 0.97

7 13 0.029 10 8.8 0.9 1 20 407 426 407 430 0.87

8 13 0.001 0.35 13.4 1.4 1 20 437 456 437 457 0.95

9 13 5.6e-05 0.019 17.3 3.3 1 23 466 488 466 488 0.97

10 13 5.8e-08 2e-05 26.7 0.3 3 23 495 515 493 515 0.97

11 13 0.0067 2.3 10.8 2.5 1 23 521 543 521 543 0.98

12 13 0.023 8 9.1 6.6 1 23 548 570 548 570 0.97

13 13 8.1 2.8e+03 1.1 0.1 1 12 575 586 575 588 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.6e-05	0.012	17.9	1.8	1	23	220	243	220	244	0.95
2	13	0.00047	0.16	14.4	0.9	2	23	250	272	249	272	0.95
3	13	0.15	51	6.6	0.1	2	11	280	289	279	299	0.89
4	13	0.0011	0.38	13.3	3.0	2	23	319	340	318	340	0.98
5	13	0.15	50	6.6	2.2	1	12	346	357	346	372	0.78
6	13	0.066	23	7.7	5.3	2	23	378	399	377	399	0.97
7	13	0.029	10	8.8	0.9	1	20	407	426	407	430	0.87
8	13	0.001	0.35	13.4	1.4	1	20	437	456	437	457	0.95
9	13	5.6e-05	0.019	17.3	3.3	1	23	466	488	466	488	0.97
10	13	5.8e-08	2e-05	26.7	0.3	3	23	495	515	493	515	0.97
11	13	0.0067	2.3	10.8	2.5	1	23	521	543	521	543	0.98
12	13	0.023	8	9.1	6.6	1	23	548	570	548	570	0.97
13	13	8.1	2.8e+03	1.1	0.1	1	12	575	586	575	588	0.85

Sequence Information

Coding Sequence: ATGGGGTCCTCGATCGTTTGTCGTTCCTGCTTAACAACGATTTCATTGGAATACATCGATTTAGAGACTCCACTCTATGATGATGCCACTTTTTTGGATTTACTTAATTATTGTACAAAGCTGCAAGCTAAACTAGATGACGAATTACCGAAAAACATTTGTGTTTCTTGCGGAAAATCACTACAAATAGcctatgaatttattaaaacatCAATTGAAGCCGATAAAGAGCTCCGTAAAAGTTTATCATACTTTGGCGATTTTAGGTGTGCGAAAGATGAAGAGAATGCCAACCGGGATATgaccaaaattataaaaaaggAGATTCAAAATGAGGACCAAGAGTTCAATTTAGAATATATAGATGAAACAGTTGATATTAAGGAGGAAGAAACTGAGTATTTCGATAAGCTTGAGGTGGTAATTTCTAACGAAGATGAAATTAATAAGGAGCACAGCGAAATTTGGTCAGCAAGAGATGAAGAAAACAGCAACTTTGCAACTCAAATGTTAGAAGATGACTATTCAGGAGACAACGCTAATACCAAATATGATGAAACCTGTAAGTGCCAAGATTGCGATGAGCAGTTATCATGCGAAGAAAGTTTGGAATTTCATAGgaaaacaattcacaaattacttCGAAAACGAGAAAACTATATTTGTGGGTGGTGCGGCGAGGCCTTTAATAGCAGATCCAAATTATGTAAACATCGCATAGTTGATCACCATGGAAAAGTGCCAAGTTCTTGTTTAACATGTGGGGAGAACTGTTCTAGTGAATCTGATCTACGAGCCCATGTAAAAAAAGCACATGGAGTACCTAAGAAACCAGTTGTATGCCCATATTGTAACAAAGAATTCAAGGGTATAGCGCTGCATATCAAATCAAATCATCCAGATATCTTGGGAATACCTATGCCTGATAATGGAAATGCAAAGTTGTCTAAAAACCAGTGCCCGTATTGCTTTCGTCACTACCAAAGCAAAAACATGTTGAATGATCATTTAAATACCCATACAGGTGAACGCCCCTATTCCTGTTCCATATGTGGAAAAACATATCACAAAAAAGTAATTCGCGACCGCCATGAGCTTGTAGTTCACCAGTCTAAGGATTTCCCAAAAGTAAAATGTGATCAATGCGACTTTAGCACTTCAAATATTCATTCATTAAGATCACACAAACATCGTCATGGACGACCAGTGGAAAAGAGATACCTTTGCGCTTATTGCCCAATGAAATTTATTAACCCAAAAATGCTTCACATGCACGAAGATTTCAAACATGGTAATGCTgaaaaagcatttaaatgtgATATTTGCGGCaagaaattttttatcaaacGCAAATTAAAAGAGCACAAACTTTGTGTGCATGTCAAGGGTCGTCCGCATGTATGTGGAATgtgtaaaaaaacatttaagaatgATTTTCAGCTTAAGGCACATCAAAAATTACACACAGATAGACAAATTGATTGTCCCCAATGTGATAAGAAATTTGCTCGGCAAGTGGATTTGAAAATTCACATGAGGACACATACAGGTGAATTACCATATGAATGTCATCTTTGCGAAAAGCGCTATGCGATAAAAGTGCGCCTAACTTACCACCTGCAGAAGCATATGGGTATAAAACACAAGTGTCAACATTGTGCGAGTGAATTTAATAGTAGATCAAAACTAAGGCTGCATATGTTCAAGCACATTGGTATGCCATATGTTTGTGACCTTTGCCAAATGGGATATCCAAATCGAGTAGGATCTCAAAAAGTTGCTGATCTTTTCCTCAAACTAAACAATATTGCCGGCATTTGCCCAGTAGCAGTTAAGCTTCACGATAAACTTAATTCAACAAAAGGAATCGTCTATGCGCCATGTTTAATTAACGTACCTGAATCTGAAATTATCTCCGAAATGAAATCCCAAGGGGTAACTGAAGTTTTCAAATTTACCAAATCTGTTAACGGCACTCGTAAGCCAACTGGTCTACTTTTAATGACTTTTGACATGTTTCAAGCTCCTTCTTAA
Protein Sequence: MGSSIVCRSCLTTISLEYIDLETPLYDDATFLDLLNYCTKLQAKLDDELPKNICVSCGKSLQIAYEFIKTSIEADKELRKSLSYFGDFRCAKDEENANRDMTKIIKKEIQNEDQEFNLEYIDETVDIKEEETEYFDKLEVVISNEDEINKEHSEIWSARDEENSNFATQMLEDDYSGDNANTKYDETCKCQDCDEQLSCEESLEFHRKTIHKLLRKRENYICGWCGEAFNSRSKLCKHRIVDHHGKVPSSCLTCGENCSSESDLRAHVKKAHGVPKKPVVCPYCNKEFKGIALHIKSNHPDILGIPMPDNGNAKLSKNQCPYCFRHYQSKNMLNDHLNTHTGERPYSCSICGKTYHKKVIRDRHELVVHQSKDFPKVKCDQCDFSTSNIHSLRSHKHRHGRPVEKRYLCAYCPMKFINPKMLHMHEDFKHGNAEKAFKCDICGKKFFIKRKLKEHKLCVHVKGRPHVCGMCKKTFKNDFQLKAHQKLHTDRQIDCPQCDKKFARQVDLKIHMRTHTGELPYECHLCEKRYAIKVRLTYHLQKHMGIKHKCQHCASEFNSRSKLRLHMFKHIGMPYVCDLCQMGYPNRVGSQKVADLFLKLNNIAGICPVAVKLHDKLNSTKGIVYAPCLINVPESEIISEMKSQGVTEVFKFTKSVNGTRKPTGLLLMTFDMFQAPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01522143;
90% Identity: iTF_01521416; iTF_01522143;
80% Identity: -