Basic Information

Insect: Volucella zonaria
Gene Symbol: -
Assembly: GCA_963966105.1
Location: OZ014530.1:39629928-39631418[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.32 1.1e+02 5.5 0.4 1 23 84 106 84 106 0.95

2 13 0.0012 0.42 13.1 0.4 1 23 159 182 159 182 0.98

3 13 0.00037 0.13 14.7 5.1 2 23 191 212 191 212 0.97

4 13 1.4e-06 0.0005 22.3 0.9 1 23 218 240 218 240 0.99

5 13 5.4e-05 0.019 17.4 0.2 1 23 246 268 246 268 0.98

6 13 8.2e-05 0.028 16.8 4.7 2 23 274 295 273 295 0.96

7 13 0.00012 0.041 16.3 3.5 1 23 301 323 301 323 0.98

8 13 1e-06 0.00036 22.8 1.4 1 23 329 351 329 351 0.99

9 13 1.8e-05 0.0061 18.9 2.6 1 23 357 379 357 379 0.99

10 13 9.8e-06 0.0034 19.7 0.6 1 23 385 407 385 407 0.98

11 13 0.00046 0.16 14.5 0.2 1 23 413 435 413 435 0.97

12 13 1.1e-05 0.0037 19.6 1.8 1 23 441 463 441 463 0.98

13 13 2.6e-06 0.00089 21.5 0.3 1 23 469 492 469 492 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.32	1.1e+02	5.5	0.4	1	23	84	106	84	106	0.95
2	13	0.0012	0.42	13.1	0.4	1	23	159	182	159	182	0.98
3	13	0.00037	0.13	14.7	5.1	2	23	191	212	191	212	0.97
4	13	1.4e-06	0.0005	22.3	0.9	1	23	218	240	218	240	0.99
5	13	5.4e-05	0.019	17.4	0.2	1	23	246	268	246	268	0.98
6	13	8.2e-05	0.028	16.8	4.7	2	23	274	295	273	295	0.96
7	13	0.00012	0.041	16.3	3.5	1	23	301	323	301	323	0.98
8	13	1e-06	0.00036	22.8	1.4	1	23	329	351	329	351	0.99
9	13	1.8e-05	0.0061	18.9	2.6	1	23	357	379	357	379	0.99
10	13	9.8e-06	0.0034	19.7	0.6	1	23	385	407	385	407	0.98
11	13	0.00046	0.16	14.5	0.2	1	23	413	435	413	435	0.97
12	13	1.1e-05	0.0037	19.6	1.8	1	23	441	463	441	463	0.98
13	13	2.6e-06	0.00089	21.5	0.3	1	23	469	492	469	492	0.96

Sequence Information

Coding Sequence: ATGGCTGGCGAAATGACACAAATCGAATTCTCTGATATGGTCAAGGACGGCAATTGCACCTTCTCCGAGTGGCcagacgaagacgaagacgatGATAGCAACAATTATGGAATACTTCTCACCGAAGATATGATTAAGCAAGAGCCCGAGTTCATAATCGGCTCAGACGATGTGGAGGAAGAGCAGAAAATCCGTGCCTTCCTAAAGAAGGCCAACATTGACGAAGAGGAGAGACAACAATTGAACTGGTACACTTGTATGTTGTGTGAAGAGCGCTTTTTATCGACCAAAGAATTATCCTTGCATGTGCAGGATCATGCAAAGTCCTCACTGAAGGAAGAAACAGACCCAATGATGCCTCCTAAGGAGCTAACTTATCGGCAGGCACCGAAGACGCCATACACTGGCTTCTCGAAGCAAGAACTTTTCCAAGACTACATCAATATTAGCGTCGAGTTGGATGGCAAACCGACGTACACCTGTAAGTTGTGTCCCAACAAGATCTATGCACGGCAAGTGTCCATAAGGAATCACATGCGAATTCACGAGAATCCAACGTACAAAGAACGCTCGTGTCATGTTTGTCACAAGACATTCCTTCGACGCGACACACTTTTAGTGCATCTTCGCACTCATAGCAACGAGCGAAACTACAAGTGCGATGTTTGCGATGCTGCTTTCACACATTCCAGTTCATTAGTGTCACATAAGCGCATACACACCGGCGAGAAGCCCTACATCTGCTATATCTGTGCAAAGGCTTTCCGTGAATCCGGTCAACTCACGGCCCACAAGAAGATCCACTTTGATAAACTCCTCCAATGCCCCAAGTGTGAAAAGAAATTTACTTCAAACAAAACGCTTCGAGTCCATTGCCGAACACATACTGACGAGCGTCCGTATGCATGCACCTATTGTGGAAAGATGTTCCGTTGCACTACAAGCCTGACCACTCACCTGCGGGTACACACAGGCGAAAAACCGTACAAATGTGAGATTTGCTCCTACGCAACCAAGCAGTCGGGTTACCTGCGCACGCACATGCGGACTCATACTGGCGAGCGTCCATACAAGTGCACCTACTGCGAGAAAGCCTTCTCCGAGAAGAAACGCTTAGTGACCCATACTCGAAGCCATACGGGAGAACGTCCGTACAAATGCATCTATTGTGATGCCGGGTTCGCCCGCAACGACAACCTCAAATATCATTTGCGAACGCACACCGGCGAAAAGCCATACGCGTGCAATGTTTGCGGTAAGCGTTTCGCTCAGGGAACAGCTCGCAGTGTTCATCAGAAGATTCACACTGGTGATAAACCATACTCTTGCCCACATTGCACAATGAAATTTCGACAAAGTGGAACGTTGGTTACTCATTTACTGATGCATACCAACGAGCGACCGTTTAAATGCGATCTCTGCGAGAAGGGTTTTCGACAGAAGGCTTTACTGAAGCGGCACGTTGCCAGTGCCCATAGCGGTTTGATATAG
Protein Sequence: MAGEMTQIEFSDMVKDGNCTFSEWPDEDEDDDSNNYGILLTEDMIKQEPEFIIGSDDVEEEQKIRAFLKKANIDEEERQQLNWYTCMLCEERFLSTKELSLHVQDHAKSSLKEETDPMMPPKELTYRQAPKTPYTGFSKQELFQDYINISVELDGKPTYTCKLCPNKIYARQVSIRNHMRIHENPTYKERSCHVCHKTFLRRDTLLVHLRTHSNERNYKCDVCDAAFTHSSSLVSHKRIHTGEKPYICYICAKAFRESGQLTAHKKIHFDKLLQCPKCEKKFTSNKTLRVHCRTHTDERPYACTYCGKMFRCTTSLTTHLRVHTGEKPYKCEICSYATKQSGYLRTHMRTHTGERPYKCTYCEKAFSEKKRLVTHTRSHTGERPYKCIYCDAGFARNDNLKYHLRTHTGEKPYACNVCGKRFAQGTARSVHQKIHTGDKPYSCPHCTMKFRQSGTLVTHLLMHTNERPFKCDLCEKGFRQKALLKRHVASAHSGLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01395957;
90% Identity: iTF_00241666;
80% Identity: -