Basic Information

Gene Symbol
ARID2_1
Assembly
GCA_963966105.1
Location
OZ014531.1:120719956-120751759[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-25 2.4e-21 77.9 0.0 2 89 37 122 36 122 0.95
2 2 7 7.5e+04 -13.0 14.2 21 62 758 797 738 825 0.43

Sequence Information

Coding Sequence
ATGTCGACAACAGAATTAATACAAGGAGCTGTACCTTTGCCTGCACAAGCCGAGGAAACATGTAAAGCCGCGGCACtcaaaaaaccgaaaacagaGTCTGACCAAGATCGCGAAACATTTTTCCGCGCTTTACAGAGTTTTCATGAATCCAGAAATACTCCAATAACGCGTCTACCCAAAATCAATGGTAAAGAGGTTGACCTGTATTTGCTTTACAACGAGGTCATTAGCCGTGGCGGCTGGCTGAAGGTTAACATTCGCAATGAATGGGATGAGCTGGTACACTGTGTGGGATTTCACCAACGATGTGTCAATGCTGCAGTGGcaattaaaacaatttacacCCGTTATCTGGATAAGTATGAGCGATTGCATTTTTTGGGTGAGGATCCGGATAAGATCGACGAAGTGGAAGATGATGGCCGGCCGAAAAAGTGGTCATCCAAGACATATAACTCTATTCCAATGACGTATAATTACAAGCAGCATGAATTGAGTGAGGAACAAAGGAACGCAAATCGTCTATCGACGGATATTTATAGAGAGTCAGAATATGATAAGTTACTGCTGTCGTTGGTGTCCCCGCTTCCCAATGAACAGGACTTTGCCATCAATGTGTGTACGCTTATGTCGAATGAGAGTAAACACACTTTGAAACTTGACCATTGCCCGAAGTTGTTggatgctctgttggcgcatgCTGGAGTTTTTTGTCACTATACTATGCGCGAATTCTTCCAAGATATATATGTGCAAGTTCGAAGGCATTCGCTGCAATCATTCTGGAAGGATCTCCTCCACGATAAGCCACAAATCTTCGAGCTCTCGTTTGATGATTATTATGAAACTGTCGATCAGAAATATAATGAGAACGGTGCAGCCAGCTTGCAGCTTCTTTTGGCTGAAAAACCTTATGTCACAGATAAGTTTAAGATCAGAGGGGACGATGTTAATATGGGCGATCCAAATGATATGGATTTTTTAGCACTCGGACGAGGACTTGGTACACAGGAATACATCGGTCAGAGGGTCCATCAAATCGCCTCTATTATAAGAAATTTGAGTTTCTACAATGAAAACGTTGTAGTCCTGGCTAAAAATCGTACATTTGTCCGATTTCTAGTAATGGGCTCTAATATTCGTTGGGGAAATCTGCATCACATGATCCTGGATGTGTTTGGCAACATTGCCACTGAATTGGAATTGCAAGACCCAACTCTCGACGACTTAACTCGATGTTTGATGTCGACAATTTGTGAGGGAATAGAAAGTTCGGATCGTGGTGTTATTATCAGTTGCCTGGAGGTGCTTTATAAAATTTGCCAGCAGGACAGCAATGAGGAGCACATTCATAAATGCCTGAATCAGAGATTATACAACACTCTGTGCTTGTATTTACCATTGAATGACATAATGCTGCTGCTCTACACCTTGGAGGCGATTTATGCTTTGAGCTCGTTGGGTCACCGTTCTTGTAATTCGTTGGTTCAAGTTAAAGGTGTCATCAATTCACTGGTGTCACTGATAACAGTTGAGACAACTCCAATGAAAGTTGGGCAAACTACTATTAAACCTATCAGTAGCAGCAGTAATAGCGGTGTGGACAAGAAGACTGCAGTCATCAGCAGTGAAAACTCAGATAATTCCAATTGGGATCCCATCCCGCCAATGGCACCACTAAGTAATTCTAGTTCATCGTTAATTCGCTCAAACGTTATTCTCCAACAGCAAGTGCTTTCGGCAAACGATGATTCTAGTTCTGCTTCGGTTGCGTCGAGTATCATAAGCTCGTCCCAAATCGAAGGTGACTTTTCTAGTTTCGAAGGTTTGCTTATGTCAAAGTCAGGTGGTAAGACTATTAGCACATTTATTATTGAAGATGATAGCTCTAAAGATTCATTGAGTCGTGGCTCTAAAGATAGTGGCCGGCAAGTTATAATTGCAAATCAAATGCTTGTCGATTTGTTGGATAAAAAGTCTCCGGATCCTCCAGTTTCAGCTAAACGAAAACATGATGATGATTCTGAAGAGTCAGATGGGAAAAAACTTCTTCTTGAGACTGAGCCAAAAATCACAGCTTCCAAGAATGCAGCCAATCTGTATGCTGAAATGGCAGCGTCAATTCTTGAAGATGAAGATTTAGAAGAGGAACCCCCAGCAACCATTATTCAGCAGACAAAATTGCCAGTACAAAATCAACCTAAACCaattcaacaacaacagcttcaacagcaacaacaacatcaacatcaacaacatcaacaacaacagcagcagcagcagcagctacAGCAACAACAGCTTCAGCAACAACAGCTTCAACAGCAACAGCTTCAGCAgcaacaacttcaacagcaacagcaacaacttcaacagcaacagcaacagcttcaacaacagcaacttcaacaccaacagctACAGCAACAGCAACTACACCAACAACAAGAGTCTCAAAATCAAGTGATTACAGTGCCCGTAAATATGCAGCGCCAACTCATCGTTAATCCGAATAACCCCCATCAGATGATTTTATCACAGAGTGCTCCACAGGCAACTATTCCCACTGCTACAGCAACAATTAAAACCGACCAGGGCTTACAAACGGTGCCGGTAATTTTACAGAAGAATTCGATGGGCCAACAAATTATTCAGCCAGTGATTCAACAACAGCCACCGCCCCAGCAACAAACACAATATGTTTTAGCTACAAATCCACAAGGACAGACGTATCTTGTGGCTCAACAGACTCAGCCACAACAACAAACCCAGCGTCTGTTAGTGACTCAAACACCTCAGCAACAAGTGTCCGGAACAAAGACTATCATAATTCTTCAGCAACAAGGTGCTCCTACACAAGCTGTTGGGCAACAGCAAATGATAACAACATCTCAGCAACCGCAAAAAGTAATAATGACCACACCACAAGGTCAGCAAATGATTGTGACACAAATGCCGCGCCCAGTCCAACATCAGATCTACATGAATGCAAGTGGGCAAAATGTCATTCAAGCTGCACCCATGCAAACAATTCAAATGGCACCTCAACAGCAgattattcaaaaacaaataccGATACAAGGCCCGCAGCAGAATCCGAATATACTTTCGCAACTCTCTCATATTCCAGCTACAATAAAAATTCATCAGACTTCCGCGCCAATGATAACTGCTTCGATTTCACAACCTATTTCAACGACGGCTACTTCAACAATTCCACGTTTGGGGAAATCCGTATCCATTGTTCAACAACAAGGAATTCCTCCACCTCAGACACAAGTTACTCCAACTGTCATGCAAGCACAAATTGTGCAGCACACGGGTACTCCCGGCTCCACTGAGAAGCGACAAGTTATCATATCCGGGGGAAGGACAATTGAGCTTGCCGAGTCGAATCAGCCGGCTCAACAAGTCGTGAGAATGATACAACCTTGTCCACCAAAGCAACAAAAACAGACTATGCCCATTCAAAAACCAGTGGTGCGACCACAAGTCAACGTAGCTCAACAACAACCAAATACAACACCAGCTCAAGCGACAGTGAAAACGTCTACGCCCCCTCCACAAGCAGCAGCTGTAATTACTTCCTCGACGTCAACTACGGTCTCAACTTCAACTTCCACTTTggcttcaacttcaacttcaacttctgCTATGGTAAAATCCCAGGTCAAAGCCAAACAAGAAGTAAAGCCAGAAATTAAAATCGAACCTAAGCCAGAGCCTAAGATTGAAACTAAACcggaaaaattggaagaagatCCACCTGTTGATCCTAGCTGGTTATTCTTATGCGATTGGCGTAATTGCCCACGAAAGAAATTTAAGTCAATAGCAGATCTGCATCATCATAGCTGTCTTGTTCATTGTCCTGAACATTTAGATGCCGGCGCTGAAATATTTTGTCAATGGGGTCCTGGTCCTGGGCTTTGTGATGGTGTTCCACGAAAGCGTTTCTCGCTGATGACACACATTTTAGATCGACACTTGACTATAGACagccttaaaacagcagtcCAACGACGTCTGTCCGGTGGTCCACAACCTTCGAATTCAGGACAACCTgttacaattataaaaaatgcaGCAGCTGTTGCTGCACAGCAGCAGTCACAACAACCAGTAGATAGTACCCGTGGTACGGCTTCACCGGCCCTTTCAACATCGTCGAATGGATCGATGCCATCAACTGGCAGTGCTGCAATGCACGCAATAAAGCGCCACTCATCGGATTTTGTTAATCCAAAGGAATTAATGGATGAGAACGAGGGTCCAGTGACCAAGAGTATTCGATTGACGGCTGCTTTGATCTTAAGGAACCTGGTTACGTATACACCAGTAGCTAAAAGGACACTTCGTCAGTATGAACCGCATTTGGCAAGTGTTGCTCTAAGCAATGTCGAGTCCAGTGGAACCATATCTCAGATTTTGTTTGAGCTAAACAACTAA
Protein Sequence
MSTTELIQGAVPLPAQAEETCKAAALKKPKTESDQDRETFFRALQSFHESRNTPITRLPKINGKEVDLYLLYNEVISRGGWLKVNIRNEWDELVHCVGFHQRCVNAAVAIKTIYTRYLDKYERLHFLGEDPDKIDEVEDDGRPKKWSSKTYNSIPMTYNYKQHELSEEQRNANRLSTDIYRESEYDKLLLSLVSPLPNEQDFAINVCTLMSNESKHTLKLDHCPKLLDALLAHAGVFCHYTMREFFQDIYVQVRRHSLQSFWKDLLHDKPQIFELSFDDYYETVDQKYNENGAASLQLLLAEKPYVTDKFKIRGDDVNMGDPNDMDFLALGRGLGTQEYIGQRVHQIASIIRNLSFYNENVVVLAKNRTFVRFLVMGSNIRWGNLHHMILDVFGNIATELELQDPTLDDLTRCLMSTICEGIESSDRGVIISCLEVLYKICQQDSNEEHIHKCLNQRLYNTLCLYLPLNDIMLLLYTLEAIYALSSLGHRSCNSLVQVKGVINSLVSLITVETTPMKVGQTTIKPISSSSNSGVDKKTAVISSENSDNSNWDPIPPMAPLSNSSSSLIRSNVILQQQVLSANDDSSSASVASSIISSSQIEGDFSSFEGLLMSKSGGKTISTFIIEDDSSKDSLSRGSKDSGRQVIIANQMLVDLLDKKSPDPPVSAKRKHDDDSEESDGKKLLLETEPKITASKNAANLYAEMAASILEDEDLEEEPPATIIQQTKLPVQNQPKPIQQQQLQQQQQHQHQQHQQQQQQQQQLQQQQLQQQQLQQQQLQQQQLQQQQQQLQQQQQQLQQQQLQHQQLQQQQLHQQQESQNQVITVPVNMQRQLIVNPNNPHQMILSQSAPQATIPTATATIKTDQGLQTVPVILQKNSMGQQIIQPVIQQQPPPQQQTQYVLATNPQGQTYLVAQQTQPQQQTQRLLVTQTPQQQVSGTKTIIILQQQGAPTQAVGQQQMITTSQQPQKVIMTTPQGQQMIVTQMPRPVQHQIYMNASGQNVIQAAPMQTIQMAPQQQIIQKQIPIQGPQQNPNILSQLSHIPATIKIHQTSAPMITASISQPISTTATSTIPRLGKSVSIVQQQGIPPPQTQVTPTVMQAQIVQHTGTPGSTEKRQVIISGGRTIELAESNQPAQQVVRMIQPCPPKQQKQTMPIQKPVVRPQVNVAQQQPNTTPAQATVKTSTPPPQAAAVITSSTSTTVSTSTSTLASTSTSTSAMVKSQVKAKQEVKPEIKIEPKPEPKIETKPEKLEEDPPVDPSWLFLCDWRNCPRKKFKSIADLHHHSCLVHCPEHLDAGAEIFCQWGPGPGLCDGVPRKRFSLMTHILDRHLTIDSLKTAVQRRLSGGPQPSNSGQPVTIIKNAAAVAAQQQSQQPVDSTRGTASPALSTSSNGSMPSTGSAAMHAIKRHSSDFVNPKELMDENEGPVTKSIRLTAALILRNLVTYTPVAKRTLRQYEPHLASVALSNVESSGTISQILFELNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-