Basic Information

Insect: Volucella inanis
Gene Symbol: ush
Assembly: GCA_907269105.1
Location: OU026157.1:68149107-68159063[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.012 2 10.1 0.0 1 20 210 229 210 231 0.90

2 9 0.00023 0.039 15.4 0.8 1 23 273 295 273 295 0.98

3 9 0.025 4.2 9.0 1.0 2 21 320 339 320 340 0.92

4 9 0.041 6.8 8.4 2.9 2 21 708 727 707 728 0.93

5 9 0.0073 1.2 10.7 0.0 3 21 765 783 763 784 0.92

6 9 1.4 2.3e+02 3.6 0.1 1 23 829 851 829 851 0.71

7 9 0.012 2 10.1 1.3 1 23 857 879 857 879 0.99

8 9 0.00015 0.026 16.0 0.6 1 23 956 979 956 979 0.96

9 9 0.2 34 6.2 1.4 2 20 1107 1125 1106 1127 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.012	2	10.1	0.0	1	20	210	229	210	231	0.90
2	9	0.00023	0.039	15.4	0.8	1	23	273	295	273	295	0.98
3	9	0.025	4.2	9.0	1.0	2	21	320	339	320	340	0.92
4	9	0.041	6.8	8.4	2.9	2	21	708	727	707	728	0.93
5	9	0.0073	1.2	10.7	0.0	3	21	765	783	763	784	0.92
6	9	1.4	2.3e+02	3.6	0.1	1	23	829	851	829	851	0.71
7	9	0.012	2	10.1	1.3	1	23	857	879	857	879	0.99
8	9	0.00015	0.026	16.0	0.6	1	23	956	979	956	979	0.96
9	9	0.2	34	6.2	1.4	2	20	1107	1125	1106	1127	0.91

Sequence Information

Coding Sequence: ATGTTGGCCGTAACTGCGGCTAACATAGTCAATGCTGAAGTTCTTATTTTCGATGACGCGTTCGAGCATAACAAGTGGTGGTTGACCAATGACTTGAGCAATGTTGGCCTCCAATTCCTTAATCAAGCGAAAGAACTTAGCCCAAGCGATTTGAATGAACAAAGCGATGCGGCATCGGCGGATATAGATCAATCAGTCGGACCGAGAACCCCATTTACAACGGAATCCCTGATGGAGGAGAACCGGCCATCGTCTGGAACGCCTCGGACTTTATCACCACCATCAGAACCGGAAGCTGATGAGCATCGTTCGCTTTCGGTTCGATCGGATTTACAATCAGAGCCAAACTCACCCACAGATCATGATGATTCGACTATAGTTCCTGTTCCTGTTATTGCAACTCCTAAGCTGCGACTTAATGCGCTATTAGCATCTGATCCTGCTCTTAATCCAGATGctagaaatttgaaaattctccATGAAGAATCGACTAAAAACCATCATCAGGACGAAAGTATTGTTGCAGTGTCTACTGCATCGATAGTAATTGCACCAGCAGTCGATTCAAAAGTTGTAGTTAAAAATTCAACACAGACCGTTGTAGACAATACACAACGAGTTAAGGTGTTTATGTGTCTTCCTTGTGGCATTGGATTCTCATCTAGATCAACATTGGAGGCACATCAAGCGTACTACTGTTCCCACAGAAAAGAGGTGGAGGAAGATGCTGGAGCCGGCAGTGCTTCGTCTGGTGATAAGAATTCAACTATAACTTCTAGTGAGCCATCAGCGAAATCTATTAAGACTGGCAAACAATACGCTTGTACGCAATGCTCTTACAGTGCCGACAAGAAGGTCTCGTTAAATCGTCATATGCGTATGCACCAAAGCTCACCAGCGCCAAGTTCGAACGCCTCGAATGGTGGCGATGATAGTTCTAGTCAACAAATCGATCGTTACTGCTCTGAATGTGATATTAGATTCTCGAATGTGAAAACGTATCGGGCGCATAAGCAACACTATTGTAGTTCCAGACGCAATGATGGtcAAACGACACCAAAATTAGGAGAAACTATTGTTAAAACTAGCGGAGGATCGGTAAGTCCACCACAGGCTCGAACTAAAACACCAACACCAGCTGCTGTAGTAGCAGCTGCAGCGGCAGCAGCAGCCGCTGTTGCACCACAACCATTTATTGCATTACCAACAAACCCCATCCTTATAATTCCATATTATCTTATACGGGCGGCTAGTATGATACCGGGACCCTTAACGTCGATATCATCTGGTATTTCAAATCCCGAAAGTACATGTTTCTCACTAGAAAACGGATCTCTAAAACCAATGGCCACCGCATTAAACACAAGTAGCATTTCGAACAACCAAATTTCACATGTAGATTCCACAAATCGATCGCATCCTCCACCGCCAAGTACACCATCAAATGTCGAGACGAGCGCAGCTCCACCACTTTTAACAGAGAAAAATACACGTTCTGCATCTGCTAACAGTGATACTATCAAGCAGAGCCGAAAAGATGGTACTATTAGaGATTTTGCTCCTCTGGATCTTTCATTGCGACGTTCTCCCATTCAGAGGAGTCAACGTGTCCGATCAGTTTCAAGTTTTATGCCACCAATAGACGATCGTATTGATATCGAGACGATGATGGAAGGAAAAGAGAACTTGTCCATTGACAGCGGCAGTATGACACCCGAACAAATTGTATGTGCTCCATCGCTACCAAATAGCCCTTCCATGAGTCCATCGCCTAAGAGACGAACTCTTAGTCCCCGATGTAGCAGTGCCGCTTCCATATCACCAGTTCCACCATCTGTAATGGATCATTTACCATTAAGACCGATTCTTCCTCCTGACATTGCCATGAAACTGACTGAGTCCAATATAATTTCACCGCTGATTGCAAAGCAGAACCTAGAATTGGCCTTTAAATTATCCTCTGCTGCAGCAGCGGCCGCTTCGGTTAATAGCAAACAGAGCGATTCCGGGAAGGCAACAATGAGTAGTAATTCTCTTTTGGGTCTTCCGGGAGCACCAATTAGTGTGGGAGCTGCTCCTTCTAGCGGACAACCGCAAATTTTCGTCAAACAAGGTGTCTCCAAGTGTAAGGAATGCAATATTGTATTCtgtaaatatgaaaattatCTAGCACACAAACAACATTACTGTTCGGCTAGAAATCAAGAAGATGCCGAGAACAAGATAAGCACTCCTCCATCAGCATCCAATCCAGGTGTGGATACCAATCCAATTGCATACCAGCAGTTGATTTGTGCTGCATGTGGTATAAAATATACTTCGCTAGACAATTTAAGAGCTCATCAGAAGTTTTACTGTCCTAAAGGTGGTGGTGATGCTACAGCGGCACCACCTGttgcaaaagaaaaatgcacaaaatgTAAAGTTTTACATGAAGTTGGTCAAGCCTGTCCTCCGATTCCAGCAACCGCACAACAAGGTTCATACAAATGTCCAGTGTGTGATGTGATCAgtttaacagctgctgaaagTCGAAAACATCTTGAGACACATGGTAGCGTCAAAGCATTCCGCTGTTCTATCTGTCGCTACAAAGGAAACACATTGCGtgGAATGAGAACACATATTCGAATGCATTTTGATAAGAAGACTTCTGACTTTAACGAAGAAAGCTAtatgtcttgcattcttgaagaTGACGGCTTAGAGCTTCCAAGTCCAGCGGCTATGAATCAGGAACAACTCTCGCAATTCGCATCTgctcaacaacaacagcagcaacaacaacagttacttcaacaacaacaacagcagtcaTCGACACAACAGCAATCTCAGCACTCACCACAGCAGAGCCAGCAAATATTCAATTGTGAGATTTGTAACTATTCTTCTTCCTACAAAGGCAATGTGATGCGTCACATGAAACTAGTGCACTCACAAGCTGGTGCATCACCTTCAATATCTCCCGAGATGATCATAGACGAAAGTGAAACGATTTCTCGGAGTGTAAACGGCGACAATTGCAGCAATCTATCCGAAAGttTCACTATTAAAACGGAACCATTAGAAATAACTGCCAcaaagaataataacaattccACATTgaatcaccatcaccatcaatTAGACGGGTCAACACAAATTAAATCAGAGCCAATGGAAGTTACAGAGAGTGTTATTAGATCACTTCCATCACCATTATCAGTTCCACCGACATCAATAAATTCATCATCGCCTCTGTCGGGAGATGAAAATACACTTTTAAGGAATACTGCTTCAATTGGTCCCGGCAGTGGTATGCCATTCAATCAGAAATACTGTCATACGTGCGATATATCATTTAACTATATGAAAACGTACTTAGCGCATAAGCAGTTctattgcaaaaataaaactcgGGGAGATGCGGATAGTCCAAGTCCAGTTCCGCCAGTGCAATCACCAACAATGTTGAATAAGAACAAGGAGAATTTGGAAGCGGCAATGTTATAG
Protein Sequence: MLAVTAANIVNAEVLIFDDAFEHNKWWLTNDLSNVGLQFLNQAKELSPSDLNEQSDAASADIDQSVGPRTPFTTESLMEENRPSSGTPRTLSPPSEPEADEHRSLSVRSDLQSEPNSPTDHDDSTIVPVPVIATPKLRLNALLASDPALNPDARNLKILHEESTKNHHQDESIVAVSTASIVIAPAVDSKVVVKNSTQTVVDNTQRVKVFMCLPCGIGFSSRSTLEAHQAYYCSHRKEVEEDAGAGSASSGDKNSTITSSEPSAKSIKTGKQYACTQCSYSADKKVSLNRHMRMHQSSPAPSSNASNGGDDSSSQQIDRYCSECDIRFSNVKTYRAHKQHYCSSRRNDGQTTPKLGETIVKTSGGSVSPPQARTKTPTPAAVVAAAAAAAAAVAPQPFIALPTNPILIIPYYLIRAASMIPGPLTSISSGISNPESTCFSLENGSLKPMATALNTSSISNNQISHVDSTNRSHPPPPSTPSNVETSAAPPLLTEKNTRSASANSDTIKQSRKDGTIRDFAPLDLSLRRSPIQRSQRVRSVSSFMPPIDDRIDIETMMEGKENLSIDSGSMTPEQIVCAPSLPNSPSMSPSPKRRTLSPRCSSAASISPVPPSVMDHLPLRPILPPDIAMKLTESNIISPLIAKQNLELAFKLSSAAAAAASVNSKQSDSGKATMSSNSLLGLPGAPISVGAAPSSGQPQIFVKQGVSKCKECNIVFCKYENYLAHKQHYCSARNQEDAENKISTPPSASNPGVDTNPIAYQQLICAACGIKYTSLDNLRAHQKFYCPKGGGDATAAPPVAKEKCTKCKVLHEVGQACPPIPATAQQGSYKCPVCDVISLTAAESRKHLETHGSVKAFRCSICRYKGNTLRGMRTHIRMHFDKKTSDFNEESYMSCILEDDGLELPSPAAMNQEQLSQFASAQQQQQQQQQLLQQQQQQSSTQQQSQHSPQQSQQIFNCEICNYSSSYKGNVMRHMKLVHSQAGASPSISPEMIIDESETISRSVNGDNCSNLSESFTIKTEPLEITATKNNNNSTLNHHHHQLDGSTQIKSEPMEVTESVIRSLPSPLSVPPTSINSSSPLSGDENTLLRNTASIGPGSGMPFNQKYCHTCDISFNYMKTYLAHKQFYCKNKTRGDADSPSPVPPVQSPTMLNKNKENLEAAML*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223805;
90% Identity: iTF_01521507; iTF_01523001;
80% Identity: -