Vina025827.1
Basic Information
- Insect
- Volucella inanis
- Gene Symbol
- hang
- Assembly
- GCA_907269105.1
- Location
- OU026156.1:95442138-95454318[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.04 6.7 8.4 1.3 3 23 257 278 256 278 0.93 2 18 0.016 2.6 9.7 2.7 1 23 448 471 448 471 0.91 3 18 4.3 7.3e+02 2.0 2.2 3 23 512 533 510 533 0.90 4 18 0.0015 0.25 12.9 1.7 2 23 578 600 577 600 0.95 5 18 0.0037 0.63 11.6 0.1 1 23 608 631 608 631 0.95 6 18 2.8e-05 0.0046 18.3 0.1 2 23 729 750 728 750 0.97 7 18 1.9e-05 0.0032 18.8 2.5 2 23 794 816 793 816 0.96 8 18 0.0041 0.69 11.5 0.3 2 23 825 847 824 847 0.95 9 18 0.00072 0.12 13.9 0.2 1 23 860 883 860 883 0.97 10 18 0.00031 0.052 15.0 1.0 1 23 913 935 913 935 0.99 11 18 0.0013 0.22 13.1 0.9 1 23 943 966 943 966 0.96 12 18 0.023 3.9 9.1 0.1 2 22 974 994 973 994 0.92 13 18 5.1e-05 0.0085 17.5 0.8 3 23 1063 1083 1062 1083 0.98 14 18 2.3e-05 0.0039 18.6 0.1 1 23 1118 1140 1118 1140 0.98 15 18 0.00026 0.043 15.3 0.3 2 23 1165 1187 1164 1187 0.93 16 18 0.12 19 6.9 0.3 2 19 1207 1224 1206 1226 0.93 17 18 0.0052 0.88 11.2 0.5 3 23 1242 1262 1242 1262 0.98 18 18 0.0081 1.4 10.6 0.2 2 23 1407 1428 1406 1428 0.96
Sequence Information
- Coding Sequence
- ATGACAGAAGAATCAATACTACGTGCACGTCAAAATTGCTGTCGCTTGTGCTTGGCTCCGGACAGTGAATGTATTTCGATTTTTAACAGCTATGCGGCTGATAAGGAGCCTTTGGCTACCAAAATTCAATCATGTGTCAATATTAAGATATCTCCGATTGACAAGCTCTCGCTGCGAATATGTCACGCTTGCATCAGTTACTTAAACTCATGGCAGAGTTTCAAGAATCGCTGTGTGGCATCACAGAACAAACAACGCAGTTGGTTGGAGATAtccaaaaaaatggaaagaaagcAAATAAGTTCTGCTATTTCAATATCAACAGTTGTAGATGgcggaggaggaggaggaggaataGGAGTAGGAAGAATAACAACTCATGATATAGAGGACCAAGAAAATAGCCAGCTCGCTAGCTCTATACTGGAAGGAATATCATCACTCAAGAAGAGACGTTCCTTAACTGTCTACCCAATTCCGGTGAGTATCAAGGATGAGCCAATGGAAGATGACGACTATGATCCAAAACATGATGAATCAGATATCGATCCAACACTATTTTTGGACCGCACTGAGGAGGAGGGCTCGGATAATTTGTCACAGAAAGAACAACATTTGGCTTCATTGGGGTTGAAGCAAGCTACCGGTCCTGTACATCCATTGAGCTATTTGgctgaCTACAGTTTCGAGGGAGAAAGGAGTTCTCATATGCCAACAGATAAATCCCTGGAAATCATCACTGCCAGCAGTGAAGTAAAAGAGGCCTCATGTCGTGCTTGTAATCTTAAATTTTCCACAAGAGCAAATGCGCGCCGTCATGAGCGCAACCTACATCCGCATTTATTCACAAGTATTCCACATAGTACAACAACATCCAAAGGGCTCACTGTAATAAATCCCTTGGCACCTGGCGTCAAAGGAGGACAAGTAATACGCCCTGTAATTCAGACCGAATATCTTGGTCATTTTGATTATGATCAACCGGAAAAGTATCAGCATCTCCTCTCGGaggataaaattttatttatgcagCGACATGATGACTTTCTCCAACAGTATCAAAATATGACGTGTAACTGCTGTTTACGTACGCATGCAACATATAAAAACTTTATGGCACACATGCGGAAGAAGTACCATACTCTGCCACGTAATCTTTGCTTCAAATGCCTCAAACAAAACGACTCGAAAGCACTATTCATATCGCATCTGAAGAAACGAAACTGTATTAATTTGTATAAGGTTTATCATAGTCTAATTGATGCAGGTGTACTAAAAAAAGACGCGTATAGCTGTTTACCTGACAAGCTGCGTGCTAAAGAACTACTGGTTAACAAAATCTATGAATGTAAGATATGTTCCAAACATTTCCGGTTGAAGCTGGAGTTTCGCAGTCATGTTTATGAAGAACATGCTGAATACCAGAAGAAAGATGTTTCACCGGGTCATTGTGGCTTTTGTGGGTTAGAAATTGAAGATCCTTTCGAACGTAAACGTCACTACAACAATATGGATTGCATAGTAATCCTGAGATGCATTACATGTGACGAAAAATTCGATAACCATCAGAAATTTTTGGATCATGTATACACAAAGCACTTGGCGAAcaataatgaaatacaaaagaGTAATCTGATGAAAGAGCTTTCTTCTGCAACGTCTACAGAAAGTTCGCCTTCGAAGAAATCTGAAACAACTTCAAAACCGCAGTTCTTTTCACGTTTACCTCAGAGTTGTAATATTTGCGGTCAACAttacaataattacaataatgTTTTGCGTCATATGGAGTCGAAACATCCAGATCAGCTGCCCCAAACGTACAAATGCACACGGTGTTTGGTGGGTTTTCCACGTCTGATGAATCTTCGTGAGCACATGATTGAAGTACATGGAATGAAAGTCGATAAAGTGCGCAATAATAGTTTCGATTATATTGTGGATTCACCAACTGTACAAGGAGGTACTCAACGGGGACCAGAAAAGATATCCGCTGATGCATATAGTGGTCGGTACGATTACGTGATGAAAGACTTGATGTCGATAACAAACGGTGGCACAATGGGTGCCGACAATGCCAATGAAAATGAAGACGATGACAATCTGTCCGACTCGTCGAATGCAAAGAAACTGAAACTTGACAGTGGTGGCACTATAATGGCTGTTGGCACTGCAAGTTTAAAAGAATGCCCCATCTGCAGTGCTGTCTTTAACAACAATATTGGTCTTTCCAATCATATGCGTACTCATACTATGGGCGAAGGTGGTGTAGAGATTACCCTGCCAGAGGAGGACAGCGTTGTTACAGAAAAGAAATCGATGGATCCTCTATTTAAGAGAAGTTTAGAACTAGCAGCAGATCGACGATTCCGTCGTATGCGATGTAGAATATGTCAAAAACGTTTTTCATCTAAAAAAAGCTACCGTCGCCATATGCTAATCGATCATCAAATTCGAAACGTGCAGTTTATCAAATGCAAACTGTGCAACGCTGAGTTTGCCTACGAAAAGGGCCTCAAAGTGCACATGTTCAAAATTCATAACACGTTGCTGAAGGATGAGATGATTGTTAAGCAATACGAATGCGACATTTGTTCTATCGTGTATCGGACCGAGGAACAGTTGCTTATGCATAAGAAGTCAGTACATGGAAATGAATGCGCTCACGCTGAAGATGAACTTCCGCCATCAGTGGAACAAAGTATGGAAGCAACCGCAACAGCACCGTTATATTGGTATCAGTGCCGATATTGCCCGTCGAATTTTAACACGAACAAGAAACTTGCCATTCACATAAACTCTCATTATGAGTTTGATTCGAATGATTACTCCTGTAAGGACTGTGGTAATGTGTACAGCGGTAGGAAGAGTCTTTGGGTACATCGCTACAAGAAACATCCTCCTGTGGCTGATCCGTCTCCGTGTTTGGTTTGCAAGAAGATATTCTTTGATAAACAAATGCTGGAGAATCATGCACAGACATGTGTTAAAAAAGGTAGTGCTGGTGGCCCACTTGAATCTGAGGTATCCACTTTCTTCCAACATAGAACAGgcgatgatgaagatgatgagaATGATttacagcagcagcagcaaaaacagcaacagcagcagcagcagcaatcaCATGTTGCTTCCGAAGAAAGTACGACgacgaatttaaaaattaaattacccGAAGTCGCCTGTACGATTTGTTCGCAAAAATTCACTGATCAGGAGCTCTTCACAAAACACATTCAGATGCACGAAATGGAATTGTACACCGACAATCCGCTGGCGGCTATGTTCGACACAGGACCAGCTGatccaaatcaattttatttggattGTGTCAATGACAATGGGGAGTACGTTTGCGATATTTGCAATAAGGCATTTGCTCAAATGACAGCGCTTAAAGTCCACCGCAAGTGGCATTTTCGAGGTGATAGCAAACAGATCCCAGCCGATGTAAACGCGCCAAAAACAGTGAAACGCAAACGTGAACTTAAATGCGATTATTGTCCATCGACATTCATCAGTACAAACAACCTTAGACGTCACATAGCTGAACTGCACAAATCTGAAATATCTAATTGGCCAGAACCACCAAAAATTGAAACCGAAAAGTACCTCCAATGTAGCAAATGTGAACTGAAATTTGATACCAAGAAAGATTGGATAGAGCATAAAGTAAatgaagccaaaattaccaaaCCGTTTGGACCATTCCAATGGGGTTGTGACATTTGCGGTGTGTATTTGTCGCGCCGAGAGAAGCTCATACATCACATGATGGCACACATGAAAGAAACAAACGGTCAATTGAGCGTAGAAGGTGAAAATTTCCTTGGGGAGAGTAATTCACAGGATTCCGAGTTGTTTAGTCATCAAGAAACATCTCAACAACGTCAAAtcgacgaagaagaagatgatgaggaagaagaagaagagtatGACGGAGATGGGGATGGAGATGGAGACGGTAATGGAGATGTAGATGAAGAGGACGCCGAAGAAACCGTCAACACAGTCAATCATGACGATAACGCAAATGATGGGCAAAATGACGAAGATACGGAGCAGATGTTCCACCTAAAAGAGCGGCTTGAACGTGAGTCGAACGACGACAGCAGTCGTGACTCCAGTGACCAGAGCTCAGACTCTGATGAttcctcatcagatgaagaCGATCAGGAAGCTCATTCTCCCCAGGAAGAACTACAAAAACGCTCTTCATGTGACCTTTGTCAAGTTTACTTTGGCACATCAGCGGAGCTACAGCGCCACGTCACTAGTCATTTCGTTAATGGACCGGGTTCTGTAACACTCACCAGCATAACCAATAACAAGGccgaaatatcaaaaattcataCAAAAGATAATGaagacgacaacgacaacgacaatgacaatgacaatgacaatgacaatgacaacgacgacgatgacgacgatgatgatgacatgACCGAAGCAGATGGACTAGAGTCTTAA
- Protein Sequence
- MTEESILRARQNCCRLCLAPDSECISIFNSYAADKEPLATKIQSCVNIKISPIDKLSLRICHACISYLNSWQSFKNRCVASQNKQRSWLEISKKMERKQISSAISISTVVDGGGGGGGIGVGRITTHDIEDQENSQLASSILEGISSLKKRRSLTVYPIPVSIKDEPMEDDDYDPKHDESDIDPTLFLDRTEEEGSDNLSQKEQHLASLGLKQATGPVHPLSYLADYSFEGERSSHMPTDKSLEIITASSEVKEASCRACNLKFSTRANARRHERNLHPHLFTSIPHSTTTSKGLTVINPLAPGVKGGQVIRPVIQTEYLGHFDYDQPEKYQHLLSEDKILFMQRHDDFLQQYQNMTCNCCLRTHATYKNFMAHMRKKYHTLPRNLCFKCLKQNDSKALFISHLKKRNCINLYKVYHSLIDAGVLKKDAYSCLPDKLRAKELLVNKIYECKICSKHFRLKLEFRSHVYEEHAEYQKKDVSPGHCGFCGLEIEDPFERKRHYNNMDCIVILRCITCDEKFDNHQKFLDHVYTKHLANNNEIQKSNLMKELSSATSTESSPSKKSETTSKPQFFSRLPQSCNICGQHYNNYNNVLRHMESKHPDQLPQTYKCTRCLVGFPRLMNLREHMIEVHGMKVDKVRNNSFDYIVDSPTVQGGTQRGPEKISADAYSGRYDYVMKDLMSITNGGTMGADNANENEDDDNLSDSSNAKKLKLDSGGTIMAVGTASLKECPICSAVFNNNIGLSNHMRTHTMGEGGVEITLPEEDSVVTEKKSMDPLFKRSLELAADRRFRRMRCRICQKRFSSKKSYRRHMLIDHQIRNVQFIKCKLCNAEFAYEKGLKVHMFKIHNTLLKDEMIVKQYECDICSIVYRTEEQLLMHKKSVHGNECAHAEDELPPSVEQSMEATATAPLYWYQCRYCPSNFNTNKKLAIHINSHYEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPPVADPSPCLVCKKIFFDKQMLENHAQTCVKKGSAGGPLESEVSTFFQHRTGDDEDDENDLQQQQQKQQQQQQQQSHVASEESTTTNLKIKLPEVACTICSQKFTDQELFTKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDCVNDNGEYVCDICNKAFAQMTALKVHRKWHFRGDSKQIPADVNAPKTVKRKRELKCDYCPSTFISTNNLRRHIAELHKSEISNWPEPPKIETEKYLQCSKCELKFDTKKDWIEHKVNEAKITKPFGPFQWGCDICGVYLSRREKLIHHMMAHMKETNGQLSVEGENFLGESNSQDSELFSHQETSQQRQIDEEEDDEEEEEEYDGDGDGDGDGNGDVDEEDAEETVNTVNHDDNANDGQNDEDTEQMFHLKERLERESNDDSSRDSSDQSSDSDDSSSDEDDQEAHSPQEELQKRSSCDLCQVYFGTSAELQRHVTSHFVNGPGSVTLTSITNNKAEISKIHTKDNEDDNDNDNDNDNDNDNDNDDDDDDDDDMTEADGLES*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01522849;
- 90% Identity
- iTF_01522849;
- 80% Identity
- -