Basic Information

Insect: Volucella inanis
Gene Symbol: -
Assembly: GCA_907269105.1
Location: OU026156.1:153207318-153209063[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2.1e-06 0.00035 21.9 2.2 1 23 128 150 128 150 0.97

2 12 6.4e-05 0.011 17.2 5.0 1 23 157 179 157 179 0.97

3 12 1.3e-07 2.1e-05 25.7 1.0 1 23 197 219 197 219 0.99

4 12 4.4e-06 0.00074 20.8 1.8 1 23 229 251 229 251 0.98

5 12 8.8e-06 0.0015 19.9 0.6 2 23 258 279 257 279 0.97

6 12 0.00034 0.056 14.9 4.6 1 23 285 307 285 307 0.98

7 12 7.5e-08 1.3e-05 26.4 0.6 1 23 313 335 313 335 0.95

8 12 0.001 0.17 13.4 2.8 1 23 341 363 341 363 0.99

9 12 9.6e-06 0.0016 19.8 2.6 1 23 369 391 369 391 0.98

10 12 3.9e-06 0.00066 21.0 5.5 1 23 397 419 397 419 0.99

11 12 2.5e-06 0.00042 21.6 0.9 1 23 425 447 425 447 0.98

12 12 2.9e-05 0.0049 18.3 0.7 1 23 453 475 453 475 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2.1e-06	0.00035	21.9	2.2	1	23	128	150	128	150	0.97
2	12	6.4e-05	0.011	17.2	5.0	1	23	157	179	157	179	0.97
3	12	1.3e-07	2.1e-05	25.7	1.0	1	23	197	219	197	219	0.99
4	12	4.4e-06	0.00074	20.8	1.8	1	23	229	251	229	251	0.98
5	12	8.8e-06	0.0015	19.9	0.6	2	23	258	279	257	279	0.97
6	12	0.00034	0.056	14.9	4.6	1	23	285	307	285	307	0.98
7	12	7.5e-08	1.3e-05	26.4	0.6	1	23	313	335	313	335	0.95
8	12	0.001	0.17	13.4	2.8	1	23	341	363	341	363	0.99
9	12	9.6e-06	0.0016	19.8	2.6	1	23	369	391	369	391	0.98
10	12	3.9e-06	0.00066	21.0	5.5	1	23	397	419	397	419	0.99
11	12	2.5e-06	0.00042	21.6	0.9	1	23	425	447	425	447	0.98
12	12	2.9e-05	0.0049	18.3	0.7	1	23	453	475	453	475	0.96

Sequence Information

Coding Sequence: atgttggtcaaacaAAAGACTGACGCTGAGATGATGGATGAATTGTTTGTGTCCAAGGGTGATACGAATCATTCTCGAGAGCAACAAACGAGTATAGTTAAAGTGGAGAAAACTTTTGACGATTATGAAGATAAGTTAAGAACttgtaCCCTGGAAGCTACCCATGAATTGAATCCCCACAAAACTAATGGAGATGCGGCATTGAAATTTGAACTTAACGCAATTAAGGATAGCATACAAATCGCTAAGGAGTATTCAGATAGTAGTATGAGTTTCAACGGTGGCAATGATGAGGATGCGAAGAGTGAAATAGAAATTATTCTCGACGCATTGGATACCGAGATTGAAAaGCCGAACCCCCGCAACAAGCGTAATGCTTGTTTTAATTGTGAAGCTTGTGGAAAATCATTTGACCGTCAACATCGTCTAAATCGCCATATGAATGTTCACAAAGTCGAAGGCCGCCCTCATGAATGTAAACAATGCAAAAGGCGTTTTTCCAAAGAAGCACACCTACAACGACACGCAATTACTCACGAGAAGaacttccaagaaaaaacccAACAATGTAAACAAAATCCAGATGGCTATAAATGCCCTGAATGTCCACGAAAATTCTTCAAGCAAGAATCATTGGCCTCTCATATGCGGACGCATCGTAAAAGCACGGATCCATCGAAAAATTACCAATGTGATATTTGCTCGAAGGTGTTCGAACGATTGTACCGACTTACAAGGCACCGAAAGCTGcatgaggaaaaccgaaaactgGTCTGCGATCTTTGTGGAAAGACCTTTGGCTTAAGCTCACACCTTATTGATCATCTGAATAAGCACAGTGGCATAAAACCACATGTTTGTAatttctgtgataaatCTTTTTTGCAGGCGTGCACTCTTAAAGATCACATACGAACACACACTGGGGAGCAACCATTTCTTTGTTCTGAATGTGGAAAAGCATTTAACAATGCCAGCAACTTGCGACAACATCAGCTACGGCACACAGGAATCAAGAGATACCAGTGTTCAGAGTGTCCTAGTAAGTTTTCTTGCAAAAGTGGCCTCTCCTCACACATGAGTACACATCGCGATCAAAAGCCATATGTTTGTGATATTTGCGGGTCACGATTTACAAAACACTATTCCTTGAAAAAACACGAGCGTATACATACTGGCGAAAGACCATACAAGTGCGACTATTGTGAAATGAGATTCAACTCTTCGGATCACATGAAGCGCCACAGACGGACGCACACTGGAGAGAAACCATATGCATGTAGATATTGTGATCGGACATTTGCTCAATCAAATGATATGATTAAACATTTACGATCGCATGTTGGAGAAAACGTTTATAAATGCGAGCAATGTGACGCATCATTCCGCTTAAATACAGAGCTTAAAAGGCACGTAACAGAacattataaatttgaaaaggcTAAAATGAAAAGTGATCTCTGA
Protein Sequence: MLVKQKTDAEMMDELFVSKGDTNHSREQQTSIVKVEKTFDDYEDKLRTCTLEATHELNPHKTNGDAALKFELNAIKDSIQIAKEYSDSSMSFNGGNDEDAKSEIEIILDALDTEIEKPNPRNKRNACFNCEACGKSFDRQHRLNRHMNVHKVEGRPHECKQCKRRFSKEAHLQRHAITHEKNFQEKTQQCKQNPDGYKCPECPRKFFKQESLASHMRTHRKSTDPSKNYQCDICSKVFERLYRLTRHRKLHEENRKLVCDLCGKTFGLSSHLIDHLNKHSGIKPHVCNFCDKSFLQACTLKDHIRTHTGEQPFLCSECGKAFNNASNLRQHQLRHTGIKRYQCSECPSKFSCKSGLSSHMSTHRDQKPYVCDICGSRFTKHYSLKKHERIHTGERPYKCDYCEMRFNSSDHMKRHRRTHTGEKPYACRYCDRTFAQSNDMIKHLRSHVGENVYKCEQCDASFRLNTELKRHVTEHYKFEKAKMKSDL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01522828; iTF_01521328;
90% Identity: iTF_01521328;
80% Identity: -