Basic Information

Gene Symbol
mier1
Assembly
GCA_907269105.1
Location
OU026158.1:39312259-39314902[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7 5.7e+03 -1.4 0.0 15 30 247 262 246 264 0.86
2 2 1.1e-07 0.00023 22.2 0.3 4 46 406 449 403 449 0.93

Sequence Information

Coding Sequence
atggaTGTAACAACCAAACAAACATCCGACAAACAAACAGCGACGCCAAGTCGGAAAAGGAATTCAACCAATAACAATGGCACTGTTGTAATATCAGCAGCAGTTAGTTTGCTTGATAGTTATCAACATGATTATCAACAACAACCAGCCTCACCAGCTTCGTCATCCACATCGCAAACAACAGGGGATACCACATttgagccatctattgacatgatggttaatgattttgatgatgAACAAACTCTAACTGAAGAAGAAGCTTTAGCTGAGCTTGAAGCTCAGGACCCAACGGATGAGATATCTACCTTGCAAAAAGAAAGTGAAATTCCATTAGAAGAGCTACTCGCACATTATAAACAGCATGTTGAACAAGATTATCAACAAAggcgacaaaaaagaaaaaaatctgcgaaaaaaaatcgatcaaaaaagcagtcgaaaaaaaattcttcccaCCTAGTTACAACAGAGACTGGAAATATATTACCAATTACTGCAATTGATGAAGTCATTGTAATTGAAGAAAGTGACGATGAAGTAGAGATCTTTAAAACGGAACAAGCTGACACGGATAATGGAGAGGATTGCCTTGTATCGGATACACAAAGTAACTATCACCGAGTCTGTGAAGATGAAGATGCTGATGACGAAGGAGCTGATATATGTGAAGAAGATGAAATCGAAGCCGATACTATGTTTTCGGGTAGAACGGTTGATTTTAGTAAACGATCACATTTATTAGAATTATATCCAGAAAAATTCTCTCGAATTCAACATAAATTAGACGATGGCTTCtctgaagatgatgatgatgaagacgaCGATGATTCAGACTATGCAAAACGAACCATTATGGTGGGGTCCATCTATCAAGCGATTATACCAGTTGGCTTATCGAAATATGGTGATGTTCTGCCATATGAAAATGAAGACAAACTCATATGGGAACCATCGCAAGTAAGCGAACAAGAAGTCGAGGAATATCTTATGCGAGTTAAGGAAATTAAATCATCGTCTTCAACAACACAAGATGAAGACATTCCTTCATCATCGGCCTCTGTTACATCCGAATCGGATCAGGGACTCGGCAGCAGTTTAGTTAAAGATGATGAACAGGCCTTACATCTTTTAGTACAATGTGGTTATAATTTTAAGGAAGCCCTAAGACGTAATCGATTAAACGCCGTCCCTCTAATTGGCTCTATGAGTCTATGGTCTGAAGAAGAATGTCGTAATTTTGAAGATGGCATACAGAAATTTGgtaaagattttcgaaaaattcgtCAGAATCAAGTGCGAACGCGTTCAATACGTGAATTGGTACAATTCTATTATCTATGGAAGAAAACCGATCGAAGAGATCAGGACTTCATAGATTCTGATACAGTTGACCATATGGATCAATACTTAGATTTTGACGAACGTGACACTGGTTCTAACGGCGGACCAAAACATGTTTCTTCATCACTATCTAGTGAAAATTTGGGATCGAGTAAGTTTACATATATTggcttgtag
Protein Sequence
MDVTTKQTSDKQTATPSRKRNSTNNNGTVVISAAVSLLDSYQHDYQQQPASPASSSTSQTTGDTTFEPSIDMMVNDFDDEQTLTEEEALAELEAQDPTDEISTLQKESEIPLEELLAHYKQHVEQDYQQRRQKRKKSAKKNRSKKQSKKNSSHLVTTETGNILPITAIDEVIVIEESDDEVEIFKTEQADTDNGEDCLVSDTQSNYHRVCEDEDADDEGADICEEDEIEADTMFSGRTVDFSKRSHLLELYPEKFSRIQHKLDDGFSEDDDDEDDDDSDYAKRTIMVGSIYQAIIPVGLSKYGDVLPYENEDKLIWEPSQVSEQEVEEYLMRVKEIKSSSSTTQDEDIPSSSASVTSESDQGLGSSLVKDDEQALHLLVQCGYNFKEALRRNRLNAVPLIGSMSLWSEEECRNFEDGIQKFGKDFRKIRQNQVRTRSIRELVQFYYLWKKTDRRDQDFIDSDTVDHMDQYLDFDERDTGSNGGPKHVSSSLSSENLGSSKFTYIGL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01522591;
90% Identity
iTF_01522591;
80% Identity
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