Vina017118.1
Basic Information
- Insect
- Volucella inanis
- Gene Symbol
- -
- Assembly
- GCA_907269105.1
- Location
- OU026154.1:159299306-159299767[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-09 6e-06 26.9 0.0 2 36 10 44 9 51 0.89 2 2 9 1.2e+04 -2.9 0.1 17 22 74 79 73 79 0.88
Sequence Information
- Coding Sequence
- ATGCCTAAATGCAGCCACAAATACCGTGAAAATGACCTTCAAAAAGCTCTTGAAAGTGTCAGGGCGCAAGCTATATCTAAAAAGGCAGCGGCCAAATTTTATGGGGTCCCTCGAACAACGCTTATATTTCGATTAAgcgaaaaatttattaaaacaagacCAGGTCCTAGGACATTTTTAACTGCCATCGAAGAAGAAGCCTTGGAAGAATGGATAACCACATCCCAGCGAAAAGCTTTTCCTAAAAGGAAAGAGGATGTGCTCCATGCCGTTAAAGAGTTTCTCGATGGAGACAAACGGGACCATCCATTTGGGGCAGAAAACATGCCAGGGAATAGCTGGTTTAAGGCGTTTTTAAATCGACACCCTTTCATTTCATTAAGAACACCAGAACCGGTTACTTCGGCAAGTGCAACAGTGGGATCTTCGGACATACATAAGATCGTGGTTTGTTATGATTGA
- Protein Sequence
- MPKCSHKYRENDLQKALESVRAQAISKKAAAKFYGVPRTTLIFRLSEKFIKTRPGPRTFLTAIEEEALEEWITTSQRKAFPKRKEDVLHAVKEFLDGDKRDHPFGAENMPGNSWFKAFLNRHPFISLRTPEPVTSASATVGSSDIHKIVVCYD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01520903;
- 90% Identity
- iTF_01520903;
- 80% Identity
- -