Basic Information

Gene Symbol
Kdm5
Assembly
GCA_907269105.1
Location
OU026158.1:42257888-42263443[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.8e-24 3.2e-20 73.3 0.0 2 89 169 252 168 252 0.95

Sequence Information

Coding Sequence
aTGTCAGCCAACACTTCTAGTGACAATAAAATTGGGACCAGTGTGGATCATTGCCCTCAATCCACACATAGATTTGCAACATATTCAATACAGTGGCCTCCAACATCATCAACTGCAGGGGCACCAACTCCCGGTGAAAGTGGTCATATAATACCATCTTCCTTAAGCAACCCAACTAGGGACGATGAACAAGGAGGAAATAACATTGTTGGTATCAAGACTTACCCGCAACATCCGCATAGCTCTTcgacattttcacaaaataaaaacgagGAATATGAGTTTGAAAAACCATCCGAATGTCCCGTATTTAGGCCAAATGACGAAGAGTTTAAAAATCCTCTGACTTATATAAGTAAAATTCGACCAATCGCAGAGAAATATGGGATTGCAAAAATTCTTCCAccaaagACGTGGACACCACCATTCACTGTTGATGTGGACAAGCTCAAGTTTACACCACGCGTGCAAAGATTGAATGAATTAGAAGCTAAAACTCGTGTCAAATTGAACTTCTTAGAtcaaattgcaaaattttggGAGTTGCAGGGCTCCTCCTTAAAAATTCCGATGGTAGAAAGGAAAGCATTAGATTTGTATTCCTTGCATAGAATTGTTCAAGAGGAAGGTGGTCTTGAGCAGGCAACAAAAGAGCGAAAGTGGTCAAGAGTTGCTCATCTTATGCAATATCCTTCAGGCAAAAGTATAGGAGCAATACTTAAAGGTCACTATGAACGAATTCTTCACCCTTTTGATATATACACATCTGGTAAAGTAATCGATATAAAGTTAGAGTCTGAAAGTGACGATAAGGACTACAAACCGCATGGCATCGTTTCGAGACAACAAATAACTCCACCTAATGAAACGACGGCCCGTCGTTCCAAACGATTTGCTAATATGAACGCAAGCAAAGAATCAGCATGTGGCTTAGGCACTTTTTCAGCGAGCATAAAATCCGAGACTGAGGAcgaaaataagttttcaaaCACGTTGAATGCTAGGCAAGGGCGTACAAGATTTGTTCGTCCAGCTACTCCGGCTCCCCTAATAAGTAACGATCCTTTGGCAAAATACATATGTCATATTTGTAATCGTGGAGACGTTGAAGAAGCAATGCTTCTTTGTGATGGTTGTGATGACAGCTATCATACATTTTGTTTACTTCCACCATTACACGATATTCCAAAAGGAGATTGGCGTTGTCCACGTTGCGTCGTAGAAGAAGTTAGTAAGCCAACCGAGGCATTCGGCTTCGAGCAAGCTCAGCGAGAATATACCTTACAACAGTTTGGTGAGATGGCCGATCAGTTTAAGGCGGACTATTTCCGTCGACCAGTGCATCTTGTTCCAACCGAACTAGTTGAACGTGAATTTTGGCGAATTGTTTCTTCAATTGACGAGGACGTTACAGTTGAGTACGGTGCTGATTTGCACACCATGGACCATGGGTCAGGATTCCCAACAAAAAGTTCTTTATATTTATTGCCGGGTGACCAGGAATATGCTGAATCTAGCtggaatttaaataatttgccCCTACTCGAAGAATCGATTTTGGGTCATATAAATGCCGACATAAGTGGCATGAAAGTCCCCTGGATGTATGTTGGTATGTGTTTCGCCACATTCTGTTGGCATAATGAAGACCACTGGAGTTATTCTATAAATTATCTTCACTGGGGAGAGCCTAAAACTTGGTATGGAGTGCCTGGAAATAAAGCGGAAGTGTTTGAAAAAACTATGAAAAGTGCGGCTCCAGAGCTTTTCGCTTCGCAGCCAGATCTTTTACATCAACTTGTTACTATAATGAACCCGAATATACTTATGAAAAATGATGTTCCGGTCTATCGCACTGATCAACATGCTGGAGAGTTTGTTATAACTTTTCCACGTGCATACCACGCAGGTTTTAACCAAGGTTACAATTTTGCTGAAGCTGTTAACTTTGCTCCAGCAGATTGGCTGAAAATGGGGCGGGATTGCATTAATCATTACTCAACATTGCGTCGTTTCTGTGTATTTTCACATGATGAGCTCGTGTGCAAGATGGCACTAGAACCAGACAAACTTAACTTTTCTATTGCTACTGCATGTTATATGGACATGGTAAAAATGGTAGATTCCGAAAAGAAACTTCGGAAAAGTTTACTAGAGTGGGGTGTTACAAGAGCAGAACGTGAGGCATTTGAGCTCATTCCGGATGATGAAAGACAATGTGAAGTCTGTAAAACAACATGTTTTTTATCAGCAGTTTCATGTCAATGTACAAAGCAAATTGTGTGTCTACGTCACTATTCAGAACTATGCGATTGTAAGCCAGAGAATCATAGTTTACAGTACCGCTATACTTTAGATGAAATGcctttaatgttaaaaaaattacaaaccaAAGCACAAAGTTTTGAGGTATGGGCAACAAAGTGCCGTGACGTGATAGATCCTCCAAGCTCCgcaaacaaaataactttagaAGACCTCCAAGAACTAGTTTTTGAAGCAGATAGAAAGAAGTTTCCCAGTTCTATGTTAATAGATCGCTTAAACTCAGCTGTTTTAGAAGCTGAAAAATGTGTAACAGTTATCCAGCAATTGGATATTAACAAAGTTCGAACCCGCACTCGTCATTCCAACGATTCCACAAAATACAAACTAACCATGGATGAGCTCGAATTGTTCGTTGAAGAAATAGATAACTTATGCTGTGTCATTAAAGAAGGACAGAGTGTTAGAGATCTTCTCACCTTTGGCAAATGCTTTGTTGCGTCTACGGAAGCGATGctttgtaagaaaataaataaattagatgaAAAATCTATAGAAAAATTGATTGATGAAGGATCGTCGCTTTGTattgaattaaatgaattaagGAACCTTCGTATGCGTCTGGATCAAGTAAATTGGTACAATCGATCGCGGCGTTTCAGAAATGCTGCTACAAAACTTCAGTTAGTTGACCTTAATCGCTATATAAAGGAAGGTTTGGGTCTCGTTCCAGACGCGCTTATTGAGAAAGAAATAGCAATATTACAAAATATAGTATTATCTGTGGAAAATTGGGAAAAAGCAGCTAAAAGCTGTTTTCAGTCAAATTGTCCGCATGATTTAACAGAAATTGAATTGTTATTAGAGGCAGCTGACAAAATCCAAGCAGAAGTACCAACGAAACCGATACTGAAAGAAGCattgaaaaaagcaaaagactGGTTAAACACTGttgaaatattacaaaaaaatgaacACTATCCTTACTGTCATACTTTAGAATCCGTAGTAAATCGTGGAATAAATATTCCACTTAAGCTTGAGGAGCTCGATCGCATGAAAAAACATTTAGATTCAGCTCGAGAATGGAAAGAAAAGACAGCAAAAGCTTTTCTTCGTAAGCATTCCCAGTTTACACTATTGGACGTGTTGTCTCCACGTATTAGTGCTGTGATGATTGGGAACAGTATAACAAAAAGAACCCCAGCAGAAGAACAATTTACAGAGAGTTTAAGTCCTGCTCAGATGGTAGATGCCTTTAAGAAggcagaagaaaaagaaattcgaGATATGCGTGAACTTAGACgcacaaatatgaaaagaatcCCACTTGAAGAcaaattttgcttttgcaaaGGAAAATTCTCTGGCACAATGTACTTATGTCAACTTTGTTTAGATTGGTTTCACAAGGAATGTGTGCCTGTTTTATCGACGAAAGAAACTGGATCTACTATACAAAttaaatcttcaaaatatttatgccCATCTTGTATGAGATCGCGTCGTCCACGCCTTGAGGCTATTTTATCCTTACTTGTTTCTTTGCAACGGCTACCAATTCGATTGCCCGAAGGTGAAGCTTTACAGTGTTTAACAGAACGTGCTATGAATTGGCAAGACCGTGCGCGTCAAGCGTTCGCAGCTGAAGAAATTGCGACTGCCTTAGCTGCATTATCTTCATTAtctcaaaagaaatttaaagaaactaaaaacGACGAAGACAACGAACAGAAGACGTCTGAAATTGAAACTGATGAAGTAGGTGAAGGGAACCTTACGGATTCAGACATTGATGGCAGTTGTGAAGAActttcaaatataattttttcgcaTAGTGAACACGATGATGAATTACAACTAAGCAAAGAAATAGGAAGCCCTGAGGTGAATCAGGATGAAAATTCGTGCACACGAACAGACGAAGATGCTAACAACGATGTGGAGCCTAACAAATCtcaaaaaaacaactcaattcCAAATGAAATCGAACACGCATATTCGGTGCCTACAGCAACTTTAAACTCAACACAATTACCCAATAGTGAACAAACGACCAAACCCCATTTAGCAAAGAAACCACCAGCTATCGTGATAGAACTGAAAAAATCTACTCGAGAATTATTAGAGAATCTTATGCTAGAAGGTGATTTATTAGAAGTATCGCTGGATGAAACCAGCCTAATATGGAAAATTCTCCATACAGCCAAATCATCTAACACTGACATGACTCCTGTTGAACAGATGTGCGAGTTATTCCCAAAAGCATGCGAATCAAAGCAAATAAACCAATTCGGTACAGTTGCACGAGTATTCAAAAAACGTCAGATTAGTGATTGCGTAACTAGCCTTCCAGCAAAACGGCTTTGGAGAGGTCCCGATGGAAATCGTAAAATATCGATTAAGcgcgataaaaaaaacaaagatctgACGGGAGATACCGAAAAATTAAGCGACGTAGATATATTAAATCCAAAATCATCCTCGGTTGGAGGTATAACGAATGTGCGCAAGAGGAAACGAGCTACTAAGTTGTTAGCTAAAAATGACCAGCCTCTGTTGAATTCAATATCTGATGACGATGAGGAGTGCCGTGCACAAAATTGTCATAAGCCTTCAGGGCGGGAGGTCGACTGGGTTCAATGTGATGGAGGATGTAATGAATGGTTTCATATGTTTTGTGTCGGGCTtgatagaaaacaaattaaacctGACGATGATTACATATGCAAGCGatgtatgaaaaataatttagattCTAATAGTACACAGCAGCAATCAAAACCCTCAAATAACGAGACCATTTTACCAGctgaattcaaagaaaaatctgaCGTAATCGTTGGTTTATTGTCAGAATTAGCAACAACATCTAAAGAGAATGTATTATCTACTCCAATCACTACTGCAATTACAACCACAAGTACAAAACCCAACAAAGAGAACGTAAGTTAG
Protein Sequence
MSANTSSDNKIGTSVDHCPQSTHRFATYSIQWPPTSSTAGAPTPGESGHIIPSSLSNPTRDDEQGGNNIVGIKTYPQHPHSSSTFSQNKNEEYEFEKPSECPVFRPNDEEFKNPLTYISKIRPIAEKYGIAKILPPKTWTPPFTVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYSLHRIVQEEGGLEQATKERKWSRVAHLMQYPSGKSIGAILKGHYERILHPFDIYTSGKVIDIKLESESDDKDYKPHGIVSRQQITPPNETTARRSKRFANMNASKESACGLGTFSASIKSETEDENKFSNTLNARQGRTRFVRPATPAPLISNDPLAKYICHICNRGDVEEAMLLCDGCDDSYHTFCLLPPLHDIPKGDWRCPRCVVEEVSKPTEAFGFEQAQREYTLQQFGEMADQFKADYFRRPVHLVPTELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGNKAEVFEKTMKSAAPELFASQPDLLHQLVTIMNPNILMKNDVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRDCINHYSTLRRFCVFSHDELVCKMALEPDKLNFSIATACYMDMVKMVDSEKKLRKSLLEWGVTRAEREAFELIPDDERQCEVCKTTCFLSAVSCQCTKQIVCLRHYSELCDCKPENHSLQYRYTLDEMPLMLKKLQTKAQSFEVWATKCRDVIDPPSSANKITLEDLQELVFEADRKKFPSSMLIDRLNSAVLEAEKCVTVIQQLDINKVRTRTRHSNDSTKYKLTMDELELFVEEIDNLCCVIKEGQSVRDLLTFGKCFVASTEAMLCKKINKLDEKSIEKLIDEGSSLCIELNELRNLRMRLDQVNWYNRSRRFRNAATKLQLVDLNRYIKEGLGLVPDALIEKEIAILQNIVLSVENWEKAAKSCFQSNCPHDLTEIELLLEAADKIQAEVPTKPILKEALKKAKDWLNTVEILQKNEHYPYCHTLESVVNRGINIPLKLEELDRMKKHLDSAREWKEKTAKAFLRKHSQFTLLDVLSPRISAVMIGNSITKRTPAEEQFTESLSPAQMVDAFKKAEEKEIRDMRELRRTNMKRIPLEDKFCFCKGKFSGTMYLCQLCLDWFHKECVPVLSTKETGSTIQIKSSKYLCPSCMRSRRPRLEAILSLLVSLQRLPIRLPEGEALQCLTERAMNWQDRARQAFAAEEIATALAALSSLSQKKFKETKNDEDNEQKTSEIETDEVGEGNLTDSDIDGSCEELSNIIFSHSEHDDELQLSKEIGSPEVNQDENSCTRTDEDANNDVEPNKSQKNNSIPNEIEHAYSVPTATLNSTQLPNSEQTTKPHLAKKPPAIVIELKKSTRELLENLMLEGDLLEVSLDETSLIWKILHTAKSSNTDMTPVEQMCELFPKACESKQINQFGTVARVFKKRQISDCVTSLPAKRLWRGPDGNRKISIKRDKKNKDLTGDTEKLSDVDILNPKSSSVGGITNVRKRKRATKLLAKNDQPLLNSISDDDEECRAQNCHKPSGREVDWVQCDGGCNEWFHMFCVGLDRKQIKPDDDYICKRCMKNNLDSNSTQQQSKPSNNETILPAEFKEKSDVIVGLLSELATTSKENVLSTPITTAITTTSTKPNKENVS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01520754;
90% Identity
iTF_01522349; iTF_01520754;
80% Identity
-