Vbom088188.1
Basic Information
- Insect
- Volucella bombylans
- Gene Symbol
- stc
- Assembly
- GCA_949129095.1
- Location
- OX422145.1:22436788-22437684[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-09 3.8e-05 26.0 8.7 1 16 36 51 36 58 0.92 2 2 2.5e-07 0.0049 19.2 12.6 1 18 68 86 68 87 0.89
Sequence Information
- Coding Sequence
- ATGTTCACCACGAAATGGTGCTTTGGGCAGCACGAACAGAGAAAAACCATTCCATGCAACCAGGAGAGCTTCAGCTGTGGCCTGGCGTGCAACAAGCCCTTAATTTGTGGTCGTCACAAGTGCATCAAATCATGTCACGAGGGTCCTTGTCAGGCGACAGGTGAAATCTGCAAGCAAAATTGCACAACAGTGAGGCCTAATTGCGGACATAAGTGCATGTCACCATGCCACGATGGGGACTGTCCGGAAACAGCGTGCAAAGAAATGGTGGAGGTAACTTGCGAGTGTGGTAATCGAAAGCAGCAGCGAGCTTGTCAGGATTTCGCCCGAGAATACCGTCGAATCGCCACCGCACAACTGGCCACCTCAATGGCCGAAGTTCAACGTGGAAACACAATCGAGTTGCGCGACATTCTTGGACCAATCAAGATGAACAACAACAAAGCCCTCGAGTGTAACGATGAATGCCGCACCATAGAACGCAATCGTCGCCTATCTATTGGTCTGCAAGTCCGCAATCCCGATTTGACACAAAAGCTACTCACCAAATATTCCGAATTAATTCGAAACTACGCCAAGAAAGATATAGTTCTTGTCAGATCCATCCATGATGCCCTAACCAATCTCGTTAAATTGGCCAAGGAAAGTAAGCAAAAGTCCCGCAGTCATTCATTTCCAACAATAAACCGCGAGAAGCGACAATTGGTGCATGAGATGTGCGAAATATTTGGAGTCGAGTCGGTGGCTTATGatgcagaacccaatcggaatgTCGTGGCTACTGCCTACAAGGAGAAGTCTTCGCCAGCACAAAGTATCATGGATGTCATACAACGTGAGAGTGGACAACGACGTGTTCCAGTGCCAAGCAACAATGCCTGGGGTTTTAAGAGATAA
- Protein Sequence
- MFTTKWCFGQHEQRKTIPCNQESFSCGLACNKPLICGRHKCIKSCHEGPCQATGEICKQNCTTVRPNCGHKCMSPCHDGDCPETACKEMVEVTCECGNRKQQRACQDFAREYRRIATAQLATSMAEVQRGNTIELRDILGPIKMNNNKALECNDECRTIERNRRLSIGLQVRNPDLTQKLLTKYSELIRNYAKKDIVLVRSIHDALTNLVKLAKESKQKSRSHSFPTINREKRQLVHEMCEIFGVESVAYDAEPNRNVVATAYKEKSSPAQSIMDVIQRESGQRRVPVPSNNAWGFKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -