Basic Information

Insect: Volucella bombylans
Gene Symbol: -
Assembly: GCA_949129095.1
Location: OX422143.1:6849688-6860290[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.018 7.7 9.5 0.5 2 20 791 809 790 810 0.92

2 15 0.049 21 8.1 0.4 1 23 818 840 818 840 0.97

3 15 0.0017 0.71 12.8 3.2 1 23 844 866 844 866 0.98

4 15 3.2e-06 0.0013 21.3 2.0 1 23 872 894 872 894 0.97

5 15 3.5e-05 0.015 18.1 0.4 1 23 900 922 900 922 0.98

6 15 0.00079 0.34 13.8 1.2 1 23 928 950 928 950 0.99

7 15 0.00075 0.32 13.9 1.9 1 23 956 978 956 978 0.95

8 15 3e-06 0.0013 21.4 2.0 1 23 984 1006 984 1006 0.98

9 15 0.00014 0.058 16.2 2.4 2 23 1348 1369 1347 1369 0.97

10 15 0.011 4.7 10.2 1.3 1 23 1375 1397 1375 1397 0.97

11 15 0.0047 2 11.4 0.3 1 23 1405 1427 1405 1427 0.98

12 15 0.0018 0.79 12.6 2.5 1 23 1433 1455 1433 1455 0.96

13 15 8.6e-06 0.0037 20.0 1.2 2 23 1462 1483 1462 1483 0.97

14 15 0.00015 0.064 16.1 2.8 1 23 1489 1511 1489 1511 0.99

15 15 0.04 17 8.4 0.2 2 23 1515 1536 1514 1536 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.018	7.7	9.5	0.5	2	20	791	809	790	810	0.92
2	15	0.049	21	8.1	0.4	1	23	818	840	818	840	0.97
3	15	0.0017	0.71	12.8	3.2	1	23	844	866	844	866	0.98
4	15	3.2e-06	0.0013	21.3	2.0	1	23	872	894	872	894	0.97
5	15	3.5e-05	0.015	18.1	0.4	1	23	900	922	900	922	0.98
6	15	0.00079	0.34	13.8	1.2	1	23	928	950	928	950	0.99
7	15	0.00075	0.32	13.9	1.9	1	23	956	978	956	978	0.95
8	15	3e-06	0.0013	21.4	2.0	1	23	984	1006	984	1006	0.98
9	15	0.00014	0.058	16.2	2.4	2	23	1348	1369	1347	1369	0.97
10	15	0.011	4.7	10.2	1.3	1	23	1375	1397	1375	1397	0.97
11	15	0.0047	2	11.4	0.3	1	23	1405	1427	1405	1427	0.98
12	15	0.0018	0.79	12.6	2.5	1	23	1433	1455	1433	1455	0.96
13	15	8.6e-06	0.0037	20.0	1.2	2	23	1462	1483	1462	1483	0.97
14	15	0.00015	0.064	16.1	2.8	1	23	1489	1511	1489	1511	0.99
15	15	0.04	17	8.4	0.2	2	23	1515	1536	1514	1536	0.95

Sequence Information

Coding Sequence: atgcaAAGTACTAGCGGAGATACTCCATTTAAGCCAAAACTGTGGTACTTCGAATTGATTTCTTTTATTGGAGAAAAGAGTAGTGATATTGAgAAAATACCTGATTCTAAGAACGGGGCCGAACAGAGTTTATTTTCTGAAACAAACGTTTCTGATGATGATAAgTCCTCAGACTCAGCAACAGAACATCCAGctccagaaataaaaaaagaaaagcgcGACAGACCCAATTGCAAAATATTGAGCGAACCCATAATAATAGCGGATATTATTAGTCAATATAAGAAGTATCCCTTTTTGTGGGACCAGACGGCGTCTCTCTACAACGATAAGTACGCTCGTAAGGATGCAttcaaacaaataacaaatttcaTCAACAATAAATTCCATAAAAATGTTACGGATAAAGAAATGAGGAAGCAAGTTGTGAATCTTCGAAGCGGATATAGACGGGCCCAACGAAAAAAGCACAACACTGACTATCGCATCAGCTTGTGGTATTACGACGAATTATCATTTATCGATAGAAAATCTGAACAAGTAGAATGTACTGATAAGgATCAAAAAGGTGATTCAACAAACGAAATATCTAAAGATGAAACAAATACTGCAGACGACACCCAGGATTCAATCAAGCCAGATAAATTAGATCAAGCCCCCAATTGTgagATAGATCCAGAATCTACCGATGAAGATGACGATTCTGAAAATGATGTCGAGGAAAGTCTGTCTAGTCGTCGAAAGAGTGATAAAAAGCTAATCCTTGGTCTAATAGAGGAATATAAACAGCACCCTTGCTTATGGAAAAACTACGACTACAAGACCAGCGGGCGTCAGAATCGCTGTAAAGCTTTTAAAACAATAGCTAGGGCTATCAATTCGCAACATAAGACAAACTTCAGTGATATAGAAATTCGAAACAAGCTTGTTCAATTAAGAAGCAGCTACAGGCGAGTTTTGCGCAATAAGGAAGCATTTGAAAAGAAACATGCTAATGCGAAAAGAATATTTTACCCGCAACTGTGGTATTTTGATAAAATGACATTTATTGGACAAAAAGAGAGCGATTTCTCAGTTAGTCGAAGAAAGAAACGGAAAGAAGAATCTGTACAACAAcataaagaagagaaaaacgataaaaataaaggaaatagtGATAAGGATTATGATTCAAGCTCTGAAGAATCCTCTGCTAGTTCTGTGCCTGGTTCCCCACCCGATTCTACATATAATTCTCAATCAGGTTCTAAATCCGATTCTCCACAAGCAGATACGAGTAACTTGATTGAAACAGAGGAATCATCAGAAAGCGAAGAAATCGAAATTGAAGAGCCTAAGATGAAAAAAAAACCTATAActaaaattactaaaaacaaGGAACTACTGACCGCTATCAtagaggaatataaaaaattacccTGCCTTTGGGCAGTGAAATATTACACTAATGATAACTTAACTCatCTAAGTCTTGAAATTATTAAGCTTCGATCCACATACAAACGTTTGATGCGCCGAAAACAAGAGAATCCAGATGGCGATTTCAAGACGAAAATTTGGTACGCTGACCTGCTCTCCTTTATCGAGAAGAAGCAAGGTTCGGATTGTTTAAATGTTAATCACCCAAAAGAGTCGTTATCTCTTGAAAACGATGAAGAGATGTACGAGGGAAGTGGCAAACTTAAAAGCAAGGAGCATGTCTTTGAAATCATAGAGCTCTACAAATCTGCGCCAATTCTTTGGGACCCAAATCATCCGCAGACTATGTTATGGAGCGAACgtaagaaaactattgaaaaaCTTGTGACAACTCTTAGTCGAGATCACGGTTGTCATCTTACCGCTGAAGAATTCCGGTATCAAGTTCGGTTTTTACGAGAATCGTATTATCGTGCTGCGAAACAAGAGAGCGGTTCGAAACATGGAGATTCCAGCAAATGTGCGGACAAGCCCTTTTTTTACGATCGTATGTCTTTCCTTGAACCGTACATTGAGAGAAAAGGACATATGACTGCTCCAGAATTATCgctggagaaaaaaaagaattcaaatgaggaattttcatttctcattgATAACAGGCAtttaatgatgaatttcatagaGCTTTACAAAGCTCATGGTTGCTTATGGGATCCAAATCATAAAGACAAAGGCAATACAGCAATGCAGTCAAATGCTTACGACAAAATAATGAATATGTTTTTACAAAATGACATAATTTTCTCGCAAGAACAAGTCATATCCGCAATAGGATTCTTACATTCAACTGTATCAAATACACAAAGAGCCTCTAAAATCAATGAAACACCAGTTTGGTTCTACGAAAATCTTCAGTTCCTTAGCAATCTTTCTCAAAACAATGATAAGTACTGCAGTCATTGTGATCAGGTGTTTAGTAGTGTAGCAGAATACGAGACGCACAAACTTGATATCGCTGGCGATTATCCTTATAAATGTGCTGTATGCAATGCGGGATTTGTATCAAGATCTAAATATGCTTTCCATCAGATAACGCATAAAGAACCGCATAAGTGTGATCAATGTGGCTTTCAAGCATACGATAGATATAACTTCAATATTCATATGCGTCGCCATAAAGGAATACGAGCGTTCGCTTGCGAACACTGTGAAAAGAGATTCGTTACCTCTGCCGAACTAAATCGGCATAAACGAATGCACACAGGCGAGAAGCCATTTATTTGTGATGTTTGTGGTAAGGCATTGGCGACGAACTTTGAATTTCGTCAGCATATGAAACGTCATAAGAATGAACGGGATTACAAGTGTCACATGTGTGAAAGTGCATATTACACATCAAGAGCTTTACGAGAACATATAGCAACACATTCAGCAGAGCGACACCATGTGTGCGAAGTCTGTGGTGCGGCATTTAAACGTAAAAATACATTACATCAGCACAAGGCGCTGCATTTGGAGAAAAAGAAGCATCAATGCCGAATTTGTGGCAGGTTATTTGCTCAAAAATCTGGCCTCAATACTCATATGAAAACGCATGGCGAATGTGAAAGTTTGACGGACGATGTTCCAATTATTGATCAGCCTAATTTAGCGGTGAGTACTGAGGATGGGGAAGAGGCATTTCACGATCTTATCGAGTACACAAATAGCGATGATCTCGCtactgaaattgaaaatattttggaaacctGCGAAAATAGCTCTACCGAGAACTATTTACTTCCGGAAATCGAGTGTCATTTATTTCAAGAGGTGGAACAACTAAATGTCAATGAAAACGCTTACATTGTAGATACATTTgtACCTGTACTTAACTATGAAATTACAGAACATGAATCAAATGTGAGAGAAGAAGTCAAGAGCGACCAAGGAGCTAATCAAGGAGATGAGCTAGCAGCAAATGACCCCTTTACAACGCGAATAATAGAAATGTACAGATTTAATGAATGCCTCTGGAACAAGGGACACCCGGATTATCACAATCGTGCAGAACGCAACGAGATCTTTCAAAAAATGGTGGATGATTTAAATAAGGAATTCAAGTGCTGTTTAGCTGTTCAGGAACTTAACTATAAACTCAACAAGCTTCGTTACGCATTCTATAGAGAACTGcgtaaaatgaaaacatttcaaTCGAATAACAATAATATCAATGAGAAATTCATTTCCAATCTATGGTATTTTGATCACTTAACGTTTCTAAAGGGAAACACGAGTGCTCTACTTGAGGTACCAAAATCTCAAATCCTCCTCGACATAATAGATGGCTTTCATAGATGTCAATGTCTTTGGGATAAATCTCATCATGATTTTCGTAATCGACGTGTACGTCATGCAGCCTACGATGCCATTGCCACAACTATAGAGATTAAATATGCAATTCGAACAACTCGTCGGTCGGTTATTTTACAAATTAAGAAACTACAAGCACTCTATTCGCAGTCGCTACGATCAGAAGGAGAAATGCAAGCAGAAAATAAAGAATCAAATCCTCTAAGAACACTTCTCCTTAAGAAATTAGCTTTTCTAAAGGGTAAAATACGAGGATGCAAAGAAATCAAATGCAGTTACTGCGATGAAACATTTTACTCGAACTCCAAGTACAAATTACACTATCAAAAGCATACCGGAGACCTGCCGTACGCCTGTAGAATATGCAACAAACAGTTTCTTCACAAACCAAGTTTGAAGGCACATGAAGACACCCATTTGGATGTTAAAGATCGAGCATTTACTTGTGAATTTTGCGGGGTAAAAATCGCCAATCGCGCTAATTATAGAGTGCACGTGCAAAGGCACAAAGGAGATCTGCGACACGAATGTAAACTTTGTACTAAACGATATGGAACAACGACCGAATTAAAGAACCATATGCTGGATCATACCGGTGAGAAACCCAATGTTTGCGACAAATGTGGCAATCAGTATAAATCGAAGAGCGAATTAACTAGACATATGCGACTACATGCCGCTAGAAGGGAATTTAAGTGTGGCTATTGTGTCAAGGCTTTCCATTTTCAATCGCAGTTGGATCAACACATGTTGACCCATTTTTCACAGCCCTGCGATATTTGCGGGAAGGAGATAAATGGAAGAAGGGCATTTATGAGACATAAAAAGGAACATAACTAA
Protein Sequence: MQSTSGDTPFKPKLWYFELISFIGEKSSDIEKIPDSKNGAEQSLFSETNVSDDDKSSDSATEHPAPEIKKEKRDRPNCKILSEPIIIADIISQYKKYPFLWDQTASLYNDKYARKDAFKQITNFINNKFHKNVTDKEMRKQVVNLRSGYRRAQRKKHNTDYRISLWYYDELSFIDRKSEQVECTDKDQKGDSTNEISKDETNTADDTQDSIKPDKLDQAPNCEIDPESTDEDDDSENDVEESLSSRRKSDKKLILGLIEEYKQHPCLWKNYDYKTSGRQNRCKAFKTIARAINSQHKTNFSDIEIRNKLVQLRSSYRRVLRNKEAFEKKHANAKRIFYPQLWYFDKMTFIGQKESDFSVSRRKKRKEESVQQHKEEKNDKNKGNSDKDYDSSSEESSASSVPGSPPDSTYNSQSGSKSDSPQADTSNLIETEESSESEEIEIEEPKMKKKPITKITKNKELLTAIIEEYKKLPCLWAVKYYTNDNLTHLSLEIIKLRSTYKRLMRRKQENPDGDFKTKIWYADLLSFIEKKQGSDCLNVNHPKESLSLENDEEMYEGSGKLKSKEHVFEIIELYKSAPILWDPNHPQTMLWSERKKTIEKLVTTLSRDHGCHLTAEEFRYQVRFLRESYYRAAKQESGSKHGDSSKCADKPFFYDRMSFLEPYIERKGHMTAPELSLEKKKNSNEEFSFLIDNRHLMMNFIELYKAHGCLWDPNHKDKGNTAMQSNAYDKIMNMFLQNDIIFSQEQVISAIGFLHSTVSNTQRASKINETPVWFYENLQFLSNLSQNNDKYCSHCDQVFSSVAEYETHKLDIAGDYPYKCAVCNAGFVSRSKYAFHQITHKEPHKCDQCGFQAYDRYNFNIHMRRHKGIRAFACEHCEKRFVTSAELNRHKRMHTGEKPFICDVCGKALATNFEFRQHMKRHKNERDYKCHMCESAYYTSRALREHIATHSAERHHVCEVCGAAFKRKNTLHQHKALHLEKKKHQCRICGRLFAQKSGLNTHMKTHGECESLTDDVPIIDQPNLAVSTEDGEEAFHDLIEYTNSDDLATEIENILETCENSSTENYLLPEIECHLFQEVEQLNVNENAYIVDTFVPVLNYEITEHESNVREEVKSDQGANQGDELAANDPFTTRIIEMYRFNECLWNKGHPDYHNRAERNEIFQKMVDDLNKEFKCCLAVQELNYKLNKLRYAFYRELRKMKTFQSNNNNINEKFISNLWYFDHLTFLKGNTSALLEVPKSQILLDIIDGFHRCQCLWDKSHHDFRNRRVRHAAYDAIATTIEIKYAIRTTRRSVILQIKKLQALYSQSLRSEGEMQAENKESNPLRTLLLKKLAFLKGKIRGCKEIKCSYCDETFYSNSKYKLHYQKHTGDLPYACRICNKQFLHKPSLKAHEDTHLDVKDRAFTCEFCGVKIANRANYRVHVQRHKGDLRHECKLCTKRYGTTTELKNHMLDHTGEKPNVCDKCGNQYKSKSELTRHMRLHAARREFKCGYCVKAFHFQSQLDQHMLTHFSQPCDICGKEINGRRAFMRHKKEHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -