Vbom029990.1
Basic Information
- Insect
- Volucella bombylans
- Gene Symbol
- SMARCC2
- Assembly
- GCA_949129095.1
- Location
- OX422140.1:336942759-336949883[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 1.6e+04 -1.5 0.0 34 43 204 213 203 213 0.87 2 2 9.2e-15 7.5e-11 44.3 0.1 3 44 640 681 638 683 0.95
Sequence Information
- Coding Sequence
- ATGGTCACTTTAGGTCCCAAAAAGGACGGCAATCCCAATGTGGAGTTTTTCCAATCCCCAGAATCTATGCAAGGTTTCGATACCATCCGAGTTTATCTAcaaaagaattataaaaaaTATTTGGCCAATAGCCCCGATCCAATAACAAGTCAATCGCTGTGCAATTTGCTAATTCAATTTCTTCAATATGTCGAGGCAAAGTTGGGCAAGAACACTACTGAACCAGCGACCACCCGGATCCCTatgcGATGTTTTCTTGACTTTAAACCGGGCGGTGGATTGTGTGTGATATTTGCCACAATGTTTAGGTTTCGAGCTGAGCAGCGTGGGAAGAAATTCGACTTCTCTATCGGCAAGAATCCACAGCGAAAGGATCCAAACATTCAACTTATGATGGAGATAGAGCAGGCGCTGATCGAAGCGGACTTGTACAGGATTCCGTATATTTACATTCGTCCGGAGGTGGACAAAGCTTTGGCGGCAAGAATCCGTGACATTTTATCGACGAGACGTGTAGAGATAGTCActgacgaggaggaggaggttaCGCATGTAATCTATCCAATAGTGGACCCCCATCCGGACGAGTATGCACGACCGATATTCAAGCGGGGCAACCATATCATGCTTCACTGGTATTGCTTTCCGGAGTCCTACGATTCATGGACACTGAATACATTTGACTTGCCAGACAATGTGCCGGAAAATCCCGAATCACCTTCTGAAAGGTGGCGAGTTTCGGCATCGTGGATACTCGATTTGGAACAATACAACGAATGGATGGCCGAGGAGGACTACGAGGTCGATGAGAGTGGAAAGAAGAAAATGCACAAGCATCGCTTATCGGTTGAAGATTTGATGTCTTGCTCAGGAGATGATAAAAAGAGATCAGGCAACAAGCAAAAACGCCGACGTTCACCGTCTCCTACTCAGAAACCTGGTAAAAGGAAGCGTTCCCCGGCAGTGTTGCATAAAAAATCACGCAGTGGCGATGGAGACGATGATGAAGATCTAACGCGAGACATGGATGATCCCATTGCTGAACCAAATATTCAGGAAGTTGTTAAAAGCTCGACTATGCAAAGTACAGCAAGCCCTGCGCCGGCTTCAAAGTCAAGGGATAACGAAATGATGCCGATTAAGGGGGGAACTATGACAGATTTGGATGAGGATATGGATCGTAGTGCTGCTGTGAGTGGGCAAGTAGTGGCCCCAGGCGAAGGTGAGAATTCTCAGACCGGAAAGACtagtgaaaatagcaatacGCAAGAGTTTACCACAAAAGAGGACATGGAAGACAATGTCACTGAGCAGACCCATCACATAATTGTGCCCTCGTATTCGGCTTGGTTTGACTACAATTCCATTCATGTCATTGAGAAGCGTGCTATGCCGGAGTTCTTCAACAGCAAAAATAAGAGTAAAACGCCTGAGATCTATATGGCTTATAGGAACTTTATGATCGACACTTATAGGTTAAATCCAACAGAATACTTAACCAGCACCGCTTGCAGACGGAATTTAGCCGGCGATGTTTGTGCAATCATGCGTGTTCATGCTTTCCTCGAACAATGGGGATTGATTAATTATCAAATCGACGCTGAGCTGCGTCCCACACCAATGGGACCACCGCCAACATCACATTTCCACATTCTAAGTGACACACCATCTGGGCTGCAATCGTTGAATCCACAAAAGACGCCACAGCCATCGGCTGCAAAGTCTCTGCTTGACTTtgacaaaaagaaagaaggcaTCAAAGAAGGTGAAGGAGAGAAGTCAATTTTGCTCACAGCAGGAGCTGCTGTTAAAGTTGAGTCCATTGAAAACGGAGGTGGtcaatttggtttaaaattGGATCAGTACACCAAAAAACCGGCTGCCATGAAGAATCGCACTGCTGCGAATATGTCACGTGAGTGGAcagaccaggaaacgcttctaCTCCTCGAAGGATTAGAAATGTACAAAGACGATTGGAATAAAGTGTGCGAGCATGTTGGCACACGCACACAAGATGAGTGCATCTTGCATTTCCTTCGCTTGCCAATCGAGGATCCCTATTTGGAAGATGATGGAGGTTTTCTGGGCCCACTTGGCTACCAACCAATTCCGTTTAGCAAGTCTGGAAATCCGATTATGTCCACTGTGGCATTTTTAGCATCTGTTGTTGACCCGCGAGTAGCTGCTGCTGCGGCTAAAGCCGCCATGGAAGAATTTGCTGCTATTAAGGATGAGGTACCTTCCTCCATAATGGACACACACTACAAAAATGTCGAGAAGCTCAATTCTGCTGGAAAGTTCGACCCCTATGCTGGTTTGTCTAATAGTGGCATTGCTGGCACTGGAGCTGACAAAGAAGATGAAGATCCAACGAAACCGCCAGCAATTTTACCACCAACGACATCCCAAGATGAAGAAATGAAGGACCTTTCCAAGAAAGAGCCGACAGCTGATTCTAGTAACCCTGAAACCCCAAATTCCGACTCTTCCCGTCCTACTACTTCAGAAGACGTAGAATCTAGTAAACCCTCTAAACCCGAATCTCTATCAGGTGTCGATgataaagaaatcaaaacggAGGAATCCTCAATGGAATCCACATCGGGCAGCACAGAAGCAACAAACGGTTCAAAGGAAAATGGTGATGGGAGCCGcaaacaaattttcaacgaaGCTAATCTTCAGACTGCAGCTGCAGCAGCTCTTGCTTCTGCCGCAGTGAAAGCCAAACATTTAGCTGCGTTAGAAGAACGCAAGATCAAGTCCCTCGTAGCGTTATTAGTGGAAACACAAATGAAGAAGTTAGAAATCAAATTGAGACATTTCGAAGAGCTAGAAACAACGATGGAAAGAGAACGTGAAGGATTGGAGTATCAGAGACAGCAGCTCATCACAGAGCGTCAGCAATTCCATTTAGAACAACTGAAAGCAGCTGAATTCCGTGCAAGGCAACAAGCTCATCATCGCTTGCAACAAGAACAACAGTGGCAAGGAAATGCCCCACAAGCACCACCCGGTGCACCAGCCGCCCCCGGTACGGCACCAATACCTGGTACTGCTGGACCAACTCCACCCTCATCAACTGGTGTAACCGCACCAACATCATCTCAACCAACAGCGCAACCAGCCGGTACAGTCCCATCTCAACCCCCAAGTGTATTGCAACCATCCACTCCGTTAgagcCACATTCCCAACAACCACCATTGCCACCAGTCGGTCCAATTGAATCCATTATGCCACACCAAGGACCACCACCACCAGTCAATGCAACAACTTTACAGCAGACACCCCCACAGCAGATACCACAACAACCACCGCAACCAGTTGTTCCGCCGAGTATTATTCCGGTCCCACCATCGCCATCGGCTCAAACCTAG
- Protein Sequence
- MVTLGPKKDGNPNVEFFQSPESMQGFDTIRVYLQKNYKKYLANSPDPITSQSLCNLLIQFLQYVEAKLGKNTTEPATTRIPMRCFLDFKPGGGLCVIFATMFRFRAEQRGKKFDFSIGKNPQRKDPNIQLMMEIEQALIEADLYRIPYIYIRPEVDKALAARIRDILSTRRVEIVTDEEEEVTHVIYPIVDPHPDEYARPIFKRGNHIMLHWYCFPESYDSWTLNTFDLPDNVPENPESPSERWRVSASWILDLEQYNEWMAEEDYEVDESGKKKMHKHRLSVEDLMSCSGDDKKRSGNKQKRRRSPSPTQKPGKRKRSPAVLHKKSRSGDGDDDEDLTRDMDDPIAEPNIQEVVKSSTMQSTASPAPASKSRDNEMMPIKGGTMTDLDEDMDRSAAVSGQVVAPGEGENSQTGKTSENSNTQEFTTKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTPQPSAAKSLLDFDKKKEGIKEGEGEKSILLTAGAAVKVESIENGGGQFGLKLDQYTKKPAAMKNRTAANMSREWTDQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPSSIMDTHYKNVEKLNSAGKFDPYAGLSNSGIAGTGADKEDEDPTKPPAILPPTTSQDEEMKDLSKKEPTADSSNPETPNSDSSRPTTSEDVESSKPSKPESLSGVDDKEIKTEESSMESTSGSTEATNGSKENGDGSRKQIFNEANLQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGNAPQAPPGAPAAPGTAPIPGTAGPTPPSSTGVTAPTSSQPTAQPAGTVPSQPPSVLQPSTPLEPHSQQPPLPPVGPIESIMPHQGPPPPVNATTLQQTPPQQIPQQPPQPVVPPSIIPVPPSPSAQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00672158;
- 90% Identity
- iTF_00312554;
- 80% Identity
- -