Vbom031058.1
Basic Information
- Insect
- Volucella bombylans
- Gene Symbol
- -
- Assembly
- GCA_949129095.1
- Location
- OX422140.1:353465957-353467360[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-08 2e-05 26.6 0.0 2 40 15 53 14 56 0.89 2 2 6.7 5.1e+03 -0.4 0.1 2 12 166 176 165 178 0.86
Sequence Information
- Coding Sequence
- atgccttgcagcaaggaaggtgttaaaagaactcctttggatgaaaatgccttacaggaagctatcaacgatgttctctacaataaggaaacaatcggcagagctgcaaaagaccacggtatttccaaaacaactttgttgcgtcatcttcaaatgcatcggaaatctggcgatgcaacgttcaaataccattcagaaattgcacacaaaaaagtgcttaatgatgaagaagaacttgccttggttgaataccttaccacagcagcaaagctgcagtatggattatcgaaaattgatacaaccaaattggcctttagttttgcaaaagcaaatggaaaaattcttccggagtcgtggataaagaacgaagcagctggcaaagaaatttacaatcttgacgaaactggaaattcaacggttcacgtcccaccgaaagttttagctgccaaaggtgaaaaacaaataggaagcatgacctcgggagaaagaggaataaatgccactatggtcgcggctattaatgcaataggaaatcatgttccgccgatgttgatattccccagagttcatttcaaggaacatatgcttaagggtgctccagcagggtgtattggtggtgctaatccttccggctggtcaaacgagcaactgtttattgagttcctcgtacattttatagcacattcaaagccaacaccagatgaaaaagttttgcttataatggacaaccatgatagccacatatctctgcaggccattgatctcgccagaaaacatggagttgttcttttgactctgacgccgcatacttcccacaaaatgcagcctctggatagaacgcacaaattgtcggccaggcttatccgaaagcaaaacatcgttaaaggatttaaagtaacaggaatatatcccttcaatcacgatattttcaacgaagatgaattccttagtagcttcgtaacggatcgaccatgtcctgaaaaaccagctgctatgcccaccgaaaatgcaaatgaccttataattgcagatgaacaaagaccaggaacatccacagcgacctctgcagtattggttccttcgataaatttcgtatcaccagagcaaataaggccatttccaaaagctgcaccaagaaaggatcctattgcacgtggaagaaagaggggaagaactaggattcttacggacactcctgagaaggaagaaattgctacaggaagctcgaaagtcaattcattttaa
- Protein Sequence
- MPCSKEGVKRTPLDENALQEAINDVLYNKETIGRAAKDHGISKTTLLRHLQMHRKSGDATFKYHSEIAHKKVLNDEEELALVEYLTTAAKLQYGLSKIDTTKLAFSFAKANGKILPESWIKNEAAGKEIYNLDETGNSTVHVPPKVLAAKGEKQIGSMTSGERGINATMVAAINAIGNHVPPMLIFPRVHFKEHMLKGAPAGCIGGANPSGWSNEQLFIEFLVHFIAHSKPTPDEKVLLIMDNHDSHISLQAIDLARKHGVVLLTLTPHTSHKMQPLDRTHKLSARLIRKQNIVKGFKVTGIYPFNHDIFNEDEFLSSFVTDRPCPEKPAAMPTENANDLIIADEQRPGTSTATSAVLVPSINFVSPEQIRPFPKAAPRKDPIARGRKRGRTRILTDTPEKEEIATGSSKVNSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -