Vbom013557.1
Basic Information
- Insect
- Volucella bombylans
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949129095.1
- Location
- OX422140.1:159595150-159634537[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-13 1.8e-10 42.7 0.1 1 44 367 411 367 412 0.92 2 2 1.4e-17 1e-14 56.3 0.0 1 43 902 945 902 947 0.95
Sequence Information
- Coding Sequence
- ATGGGTGGTATTGCTATCAAAAAGGATGTCATTTATAGGAGCTTCCCTTGtggcTTAGAACGGCTTGCTGAGGAGCTGATGGGACGCAGGAAATGGAAGCAATATCAAGAAGCTTTAACGCGTTCCCAATTAAGTGCAGATATTACAAATCTGGATCAAACCGATATCATAAGTAAATctttcttccaaaacacattTCTGCTCAAATTaacagcaaacattttttgGACAGGTCAGAAATACGAAGCCGAACAAAAACTGGAGAAGATCAAGGAAAATTCACATCAACAGCAGCCgccgcaacaacaacagcaaccattCGAAAACGACGTTCCAAAAATCAAAACCGAAGTTTTCGACGCGAACGAAAGAACTTTGAGTTCACCTCACATAAAAAGAGaaaacttCGAAAACAGTTCAGATATAACGGAGGGAGggattataaaacttaataataatacaaCTACATCACATAgtattcataataataataattgtaaaaaggaTAAGGAGGAATTGCTGCCACCACCTACTACTACCCCAAGTCCGTcgccaccaccaccaacacccATCGATTGGAAACCGAAtgaaaagtgtaatttttgtgttGACGGTAAACTCCTCACAGTGAACGAGAAGGGTGAATTAGTGGCTGAGTCAAGCCCGGCCTTGTCCGAGGCAGATCTCGCCAATAGAcCACCAGGGGATACGGATAGCGATTCCAGCGATAGTGTGGTACCAGATGCTAGAGCCAATGCGGGCAAAGCACTAACATCACGCCTAAGAGATTCATTTCCACCGAATATGACCTCATTGGAGTCAATGGCAGCACAATGGAGTTTAATACCGTTTACTTATCCAAGTATACTTTACAATCTAAATCAGCATGTGAACTCGGCCACACCAACTACCTCAGAGACATCGGGCGCCGCTATAAGTCCCTCACTTAAGGATTCTCCCAGTCCCAGTGATTTAACGGGTGAACAGCCATTAGATCTTAGTTCAAAACCATCACCAAATTCCTCAATTGTCGGAGATGCAAGGCATGTGCACagAGCGAAACCTCGTGTAACACCATGTACCGGCCGACGAGCTTACACCGAGGAAGAACTAAACAGTGCACTGCAAGATATCATGAGTGGTAGGCTAGGTACACGTCGTGCAGCCGTACAATATAACATTCCACGTTCCACATTACGTAATAAAGTGTACAAAATTTCATCGGGGGCAAAACGTGAAACAACTACATCACTCCCTCATCTAGCAAGTCTTGAGGATTTAGACGATGTTAATGAGGAAAGGCAAGATTTATCAGCAGATGAAGAAGATAGTAGTGGTGATAAGATTCTAAGTAGTTCCTTAGTGTCACATGGAGGAGATGATCTTGCCAATCGTTTTAGCGATGCTAATTTGGTAGCCAATATACAAAAGATCTGCGCCGAACAAAATACCCTAACTTCACAGCAgcatcatcagcagcagcaacaacaacagcagcaccagcaacaacaccatcaTCAACCGCATAGTGATATTTCGCATCAAAATAAACCGACAACATCACTTGAGTCACAGTCAAAGTGTAAAGCCTCAACTACACCGCAACCTCCGCCGTCACAAACATCTCCGATCGCACAGAATGCGTTGCAAAGTGTATTACTACAAAGTTTGCTACTATCTGGCGGTCTTCCCATACAAAATGTTGAAGAAACTTTTCAATTTCTAAATGCCTTTTTCATGAAGCAGGATCCAAGTTTGATAAATCCTCAGTTATTGATGCAATTACAACagcaatcacaacaacaatCGTCACAGTCCacacagcaacagcaactgcatcagcagcagcatcagcatcagcagcaacaacatcaacatcaacagcagccacaacaacaacagagtCAACATCTGCATCAGAATGCAGCAGTACATTCATCAGCTGTGGCAGCggcggcagcagcagcagccgcTGCGGCCGCATCCTTTCAAAATCGCCAACCAAAGTCTGAAACACCAGAAACTGCATCTTCAGTGGACCTAAACGAGACGCTAGGTGATGATCCATCAGTTATTCTAAAAATTCCGTCCTATAAACCGGTAGCTGGATCCTCAACTTCATTAACTGCAGCTGTTGCAGCCGCGGCACTATGTAACAATAAAAACGGTGAAAATCTACCATCAAATTCACCAAAAATTCCCACACCATCATCACTGTTGGGTGCCAATACTTCAACGCAACAAATGCATCACCATCATCACCCGCATCAGCATCACAATCCATCGGCGTCATCTTTAAATAATATTCCCGGTATATCACCACCATTGATACGTCACACAAGTGGCGAATCAGAATCACCGCCAACACTTTCACTACGTGACGTTATCGCCAATAGTATAAGCCGAACATTTAGTCAGCAGGCCAGCCGTGACAATACAAGTCCGAGTCCTGCTCACTCATCTTCATCGGCAATGGATCAAAATGATCAGTACAAACGGCCTAGCATATCAGTGATTAAGAATATCGGCGGCACCGATACAACACGCTTTGCAACCGCTCCAAATTTACTCGGCAGTCATCACAATTCTAATCACCATCATCAACAgcaccatcatcatcagcatcacaGCCAAAATGCGGCAAGCAACAATTTGGTAGGTGGTAAAGGCACACGACCGAAACGTGGTAAATATCGTAATTACGATCGTGATAGCCTTGTCGAAGCGGTTAAGGCCGTGCAACGTGGTGAAATGTCCGTGCATCGTGCTGGTAGTTACTATGGTGTGCCTCATTCAACACTTGAATACAAGGTTAAAGAACGTCATTTGATGCGACCTCGAAAACGTGAACCGAAACCACAACCTACATCGTTGGACGATCGAACGGGAGGTAGTTCATCGAGTGGCAATATCTCTGGTTCATCGGTGAATCCTTCAAAAAACTCTAACATTCCAGGTCTATCGGCTGTAAATAGTTTAGATAAATTGAGTAAGAGCAGCGGTGGTccgactggtattagtatcaacCAAAAACAGTCTGCCGCTGGCAAGAGTAACCCACCATTCCCTACGACATCACCAAATGGTATGAAAATACCACCGGCGCTGTTTGAGCCAAGCTTAGCCGTACCCCTACAATATCAACAATCAATGTTTTGGCATGGCGGTTTCGGTTCTCTCCAAATGGATTATCCACGATCACAAGCTGCAGCGGCAGCTGTAGCTGCTGCAGCTGCTGCCGGTGGAGTACCAACTAATGCCACATTTGCTGCTAATGCTGAATTATTTAAATCCCAAATTATGCAAAGATTTCATGAGGGACGAGGGGCATCTACTGCCATTGGTAGTCCACCAGCGCCTGCAAATTTATCCAActccaacaacagcagcagcaataacaataatagtaaaagtgtacgagaaattgcTGAGAATCTTTACGACACAACCGGTGCGAATGGTTCCTTCTTAGATGGCATCATTCGCAAGTCATTAGACCGCAAAAGTTCCGATATATCACAAGGCGCCTTATTAGACCAATTGGCTAAAAATAGTAAACCACCTCTGCCGCGTCATATGATCAATAATGAACGTTCAACGTGCGATTTATCAAATCGTAAACGTTCTGCCAGTCCGATGCAATATCATCCAGCGATGGAGATTAAACGTGAACGTGCCAGCCCCACATCAGACTCTTCAAATAGTGACTCAGAACGTAATCATCGGCGTGACTCTGATTCAGAACCATCAACACAACATCATCCGATAGGACTGCATCATGCTCTTTTAAGTGCTAGTGGTGATTTAAATGGCGCTCAACATGGACTCTCCTCCTTAATTGGCGGTGGAGTTGGCGGTGGTGGTGTTGATCAATTGACGAGTTCGGAAAATAATCTAGCCACTTCATCGTCAGGGGTCACCACCAGTATTCTGCATGAGAAATTAGGACAAATCAAGTCCGAAGCAGAAGATAGTTTATAG
- Protein Sequence
- MGGIAIKKDVIYRSFPCGLERLAEELMGRRKWKQYQEALTRSQLSADITNLDQTDIISKSFFQNTFLLKLTANIFWTGQKYEAEQKLEKIKENSHQQQPPQQQQQPFENDVPKIKTEVFDANERTLSSPHIKRENFENSSDITEGGIIKLNNNTTTSHSIHNNNNCKKDKEELLPPPTTTPSPSPPPPTPIDWKPNEKCNFCVDGKLLTVNEKGELVAESSPALSEADLANRPPGDTDSDSSDSVVPDARANAGKALTSRLRDSFPPNMTSLESMAAQWSLIPFTYPSILYNLNQHVNSATPTTSETSGAAISPSLKDSPSPSDLTGEQPLDLSSKPSPNSSIVGDARHVHRAKPRVTPCTGRRAYTEEELNSALQDIMSGRLGTRRAAVQYNIPRSTLRNKVYKISSGAKRETTTSLPHLASLEDLDDVNEERQDLSADEEDSSGDKILSSSLVSHGGDDLANRFSDANLVANIQKICAEQNTLTSQQHHQQQQQQQQHQQQHHHQPHSDISHQNKPTTSLESQSKCKASTTPQPPPSQTSPIAQNALQSVLLQSLLLSGGLPIQNVEETFQFLNAFFMKQDPSLINPQLLMQLQQQSQQQSSQSTQQQQLHQQQHQHQQQQHQHQQQPQQQQSQHLHQNAAVHSSAVAAAAAAAAAAAASFQNRQPKSETPETASSVDLNETLGDDPSVILKIPSYKPVAGSSTSLTAAVAAAALCNNKNGENLPSNSPKIPTPSSLLGANTSTQQMHHHHHPHQHHNPSASSLNNIPGISPPLIRHTSGESESPPTLSLRDVIANSISRTFSQQASRDNTSPSPAHSSSSAMDQNDQYKRPSISVIKNIGGTDTTRFATAPNLLGSHHNSNHHHQQHHHHQHHSQNAASNNLVGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPTSLDDRTGGSSSSGNISGSSVNPSKNSNIPGLSAVNSLDKLSKSSGGPTGISINQKQSAAGKSNPPFPTTSPNGMKIPPALFEPSLAVPLQYQQSMFWHGGFGSLQMDYPRSQAAAAAVAAAAAAGGVPTNATFAANAELFKSQIMQRFHEGRGASTAIGSPPAPANLSNSNNSSSNNNNSKSVREIAENLYDTTGANGSFLDGIIRKSLDRKSSDISQGALLDQLAKNSKPPLPRHMINNERSTCDLSNRKRSASPMQYHPAMEIKRERASPTSDSSNSDSERNHRRDSDSEPSTQHHPIGLHHALLSASGDLNGAQHGLSSLIGGGVGGGGVDQLTSSENNLATSSSGVTTSILHEKLGQIKSEAEDSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01521798;
- 90% Identity
- iTF_01522466; iTF_01521798;
- 80% Identity
- -