Basic Information

Gene Symbol
Arid2
Assembly
GCA_949129095.1
Location
OX422141.1:107530910-107541166[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-25 1.9e-21 78.6 0.0 2 89 37 122 36 122 0.95

Sequence Information

Coding Sequence
ATGTCGACAACAGAATTAATACAAGGAGCTGTACCTTTGCCTGCACAAGCCGATGAAACATGTAAAGCCGCGGCACTCAAAAAACCTAAAACTGAGTCTGACCAAGATCGCGAAACATTTTTCCGCGCTTTACAGAGTTTTCATGAATCCAGAAATACTCCAATAACGCGTCTACCCAAAATCAATGGCAAAGAGGTTGACCTGTATTTGCTTTACAACGAGGTCATTAGCCGTGGCGGCTGGCTGAAGGTTAACATTCGCAATGAATGGGATGAACTGGTACATTGTGTGGGATTTCACCAACGATGTGTCAATGCTGCAGTGGCAATTAAAACAATCTACACCCGTTACCTTGATAAGTATGAGCGGTTGCATTTCTTGGGTGAGGATCCGGACAAAATTGATGAAGTGGAAGATGATGGCCGGCCGAAAAAGTGGTCATCCAAGACATATAACTCTATTCCAATGACGTATAATTACAAGCAGCATGAAATGACTGAAGAACAAAGGAACGCAAATCGTCTATCTACGGATCTTTATAGAGAGTCAGAATATGACAAGTTACTGCTGTCGTTGGTGTCCCCACTTCCCAATGAACAGGACTTTGCCATCAATGTGTGTACGCTTATGTCGAATGAGAGTAAACACACTTTGAAGCTTGACCATTGTCCGAAGTTGTTGGATGCTCTGTTGGCGCATGCTGGAGTTTTTTGTCACTATACTATGCGCGAATTCTTCCAAGATATATATGTGCAAGTTCGCAGGCATTCGCTGCAATCATTCTGGAAGGATCTCCTCCACGATAAGCCACAAATCTTCGAGCTCTCCTTTGATGATTATTATGAAACTGTCGATCAGAAATATAATGAGAACGGTGCAGCCAGCTTGCAGCTTCTTTTGGCTGAAAAACCTTATGCCACAGATAAGTTCAAGATCAGAGGGGACGATGTTAATATGGGCGATCCAAATGATATGGATTTTTTGGCACTCGGGCGAGGACTTGGTACACAAGAATACATCGGTCAAAGGGTCCATCAAATCGCTTCTATTATAAGAAATTTGAGTTTCTACAATGAAAACGTTGCAGTCCTGGCTAAGAATCGTACATTTGTCCGATTTCTAGTAATGGGCTCTAATATTCGTTGGGGAAATTTGCATCACATGATCCTGGATGTGTTTGGCAACATTGCCACTGAATTGGAATTGCAAGACCCAACTCTAGACGACTTAACTCGATGTCTGATGTCGACAATTTGTGAGGGAATAGAAAGTACGGATCGTGGTGTTATTATTAGTTGCTTGGAGGTGCTTTATAAAATTTGCCAGCAGGATAGCAATGAGGAGCACATTCATAAATGCCTGAATCAGAGATTATACAACACTCTGTGCTTGTATCTGCCATTGAATGACATAATGTTGCTGCTTTACACCTTGGAGGCCATTTATGCTTTGAGCTCACTGGGTCACCGTTCTTGCAATTCGTTAGTTCAAGTTAAAGGTGTCATCAATTCACTGGTCTCATTGATAACAGTTGAGGCACAAACTTACGGCCCGGATGGTTGTATTCTTATGAGAGTTGTGGAAACAGTTCCTGGGAACATGTTACCAATGGTTGCGCAGAACATCGCCAACATTGCCAATCTACAGAACGCAATACAtactcaacagccacaacatcAACCAGATGCAGTATCAGCTCCACAAGGTGCTCAAATTGTGCCTCCGATACGACCGACTGCAGATGTAACTGCTCAACAAGGCACAAAATCCCCAGTTCCTTCGCAAGTACATCAACTTTCGACCAAGcaaGAACACGAGCAATTTGCTCTATCCTGGCTTAGTGCGACATTTGAACCAACTTCCTCGACAGACAGTCGAGTTGAACAACAAGAACTTTATCGAATGTATTTGTCGGCAACACAAAAATGCGGTCGGCGCGGAATTGTGTCACATACACAATTTCCTCGGATGGTTCGCACGATATTTGGTGCAAATATCGGGCCAACTATtgttaaaaaaactgaaaatggcACAGAAAGTAGTAAAATCTACTACGTATGTCTGCGTGTTCGGGCTAATCCACTGCCCATTCAAGTGAAAGCAATGTCTCCTCAAAAAGGTTTGAAGGAGATCAAACAGAAACTTGAACCAGGTTCTgtaaaaaagacaaagaaacGAATTAAATTGCAGGAACAACTAAAGGTcgaacaacaacagaaacagcaacaaacACCCGGCACCCAAAATACAGCCACTACGCCAACACCAGTTGTACAACAACAAGCTGCCTCTATACAAAATCAGCAACAAACTGTTGAAAAAGTTCAAACCGCCACCCCACAGCAAACTGTTGCTGTACAACAAAAACAGACTCCAATTGCGTCACAGTCACAATCTAATGTGTCATCGAAAGCTGAAAATCAATCAACAATTACGAATGCAACATCAAAACTTCCCTTGTCCGCACAAGTAACgaaaattTCAAACACAACACAACCCCAGTTGATTGGAAACGTTTTGGTTACACACACTCCTCAAGCTGCTTTGGTTCAACAAACTGCAACACCGATTAAAGTAACAACTATCACTGAACAACCACAAGTTGCTCAACAACAGACACAATTGCCTAGTACttctcaacaacaacagcaacaacaacaaccgcaacCGCAAACAATTACTCAACAAATAATAAACTGCACTTCAACAACCCCATCAAACGGTGGTGGTAATGGTGGTACACAACCGTCGTCGTCATTAATTAAAAGCCTACTGGCCAATAAGGTAACATCTTCTCCCACAGCTACAGCTAATACTACTGACAATACTTCTGCTACTACCAATGCCAATACCCATGCTGCTGCTGTAATCGATACGAATGCAAGTGCAGCTCAAAGTACTCCTCAAAGTTGTTTGATTACCCAAAATGTTAATTTGCATCAGGTAACATcctatgttgttgttgttctagtTGTATTGTAG
Protein Sequence
MSTTELIQGAVPLPAQADETCKAAALKKPKTESDQDRETFFRALQSFHESRNTPITRLPKINGKEVDLYLLYNEVISRGGWLKVNIRNEWDELVHCVGFHQRCVNAAVAIKTIYTRYLDKYERLHFLGEDPDKIDEVEDDGRPKKWSSKTYNSIPMTYNYKQHEMTEEQRNANRLSTDLYRESEYDKLLLSLVSPLPNEQDFAINVCTLMSNESKHTLKLDHCPKLLDALLAHAGVFCHYTMREFFQDIYVQVRRHSLQSFWKDLLHDKPQIFELSFDDYYETVDQKYNENGAASLQLLLAEKPYATDKFKIRGDDVNMGDPNDMDFLALGRGLGTQEYIGQRVHQIASIIRNLSFYNENVAVLAKNRTFVRFLVMGSNIRWGNLHHMILDVFGNIATELELQDPTLDDLTRCLMSTICEGIESTDRGVIISCLEVLYKICQQDSNEEHIHKCLNQRLYNTLCLYLPLNDIMLLLYTLEAIYALSSLGHRSCNSLVQVKGVINSLVSLITVEAQTYGPDGCILMRVVETVPGNMLPMVAQNIANIANLQNAIHTQQPQHQPDAVSAPQGAQIVPPIRPTADVTAQQGTKSPVPSQVHQLSTKQEHEQFALSWLSATFEPTSSTDSRVEQQELYRMYLSATQKCGRRGIVSHTQFPRMVRTIFGANIGPTIVKKTENGTESSKIYYVCLRVRANPLPIQVKAMSPQKGLKEIKQKLEPGSVKKTKKRIKLQEQLKVEQQQKQQQTPGTQNTATTPTPVVQQQAASIQNQQQTVEKVQTATPQQTVAVQQKQTPIASQSQSNVSSKAENQSTITNATSKLPLSAQVTKISNTTQPQLIGNVLVTHTPQAALVQQTATPIKVTTITEQPQVAQQQTQLPSTSQQQQQQQQPQPQTITQQIINCTSTTPSNGGGNGGTQPSSSLIKSLLANKVTSSPTATANTTDNTSATTNANTHAAAVIDTNASAAQSTPQSCLITQNVNLHQVTSYVVVVLVVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-