Basic Information

Gene Symbol
XBP1
Assembly
GCA_949129095.1
Location
OX422141.1:154152644-154152982[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.41 1.7e+03 1.4 0.6 17 25 44 52 43 56 0.77
2 2 8.7e-12 3.7e-08 35.6 8.7 2 35 59 92 58 104 0.91

Sequence Information

Coding Sequence
ATGACTACGCCCGTTTTTATGACTGTCCCTAAGTACGTTGCAATTTCCCCGAATTCTATGACCAGAATTTCTTCTTTATCCATGGCAACTAATTACAACTGTGACTCTTCGTCTTCCTTGGATGAGCCCAGTGCTTGCCGCAGAAAAAAACGACGTCTGGATCATTTATCATGGGAGGAAAAGCtccaaaggaaaaaattaaagaaccgTGTGGCAGCGCAAACTTCTCGCGATCGTAAAAAGGCCCGCATGGAAGAAATGGAGAAAACCTTCAAACGAACTCACAGAACGGACAGAAATTCTGCAAAACAAATGCGACAGCCTTCAGGCTATAAATGA
Protein Sequence
MTTPVFMTVPKYVAISPNSMTRISSLSMATNYNCDSSSSLDEPSACRRKKRRLDHLSWEEKLQRKKLKNRVAAQTSRDRKKARMEEMEKTFKRTHRTDRNSAKQMRQPSGYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-