Basic Information

Insect: Vollenhovia emeryi
Gene Symbol: -
Assembly: GCA_000949405.1
Location: NW:386556-411305[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.96 74 3.7 1.6 2 19 152 169 152 172 0.82

2 16 3.5 2.7e+02 1.9 1.5 1 23 202 225 202 225 0.91

3 16 0.00061 0.047 13.8 1.9 1 23 609 632 609 632 0.97

4 16 0.78 60 4.0 0.3 2 23 664 685 664 685 0.95

5 16 8e-05 0.0062 16.5 0.3 1 20 711 730 711 731 0.96

6 16 0.00015 0.011 15.7 0.2 2 22 871 891 870 891 0.95

7 16 0.00021 0.016 15.2 0.1 3 23 899 920 897 920 0.92

8 16 0.33 26 5.2 7.1 1 23 930 953 930 953 0.94

9 16 0.13 9.9 6.5 1.2 2 21 982 1001 981 1002 0.92

10 16 0.043 3.3 7.9 5.8 1 23 1043 1066 1043 1066 0.93

11 16 0.0014 0.11 12.6 0.6 1 23 1113 1135 1113 1135 0.96

12 16 0.023 1.8 8.8 4.4 1 23 1141 1164 1141 1164 0.96

13 16 2.1 1.6e+02 2.6 2.4 1 23 1173 1196 1173 1196 0.87

14 16 0.0075 0.58 10.3 0.3 1 23 1225 1248 1225 1248 0.92

15 16 0.11 8.2 6.7 0.2 1 23 1568 1591 1568 1591 0.96

16 16 0.087 6.7 7.0 1.2 2 23 1614 1636 1613 1636 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.96	74	3.7	1.6	2	19	152	169	152	172	0.82
2	16	3.5	2.7e+02	1.9	1.5	1	23	202	225	202	225	0.91
3	16	0.00061	0.047	13.8	1.9	1	23	609	632	609	632	0.97
4	16	0.78	60	4.0	0.3	2	23	664	685	664	685	0.95
5	16	8e-05	0.0062	16.5	0.3	1	20	711	730	711	731	0.96
6	16	0.00015	0.011	15.7	0.2	2	22	871	891	870	891	0.95
7	16	0.00021	0.016	15.2	0.1	3	23	899	920	897	920	0.92
8	16	0.33	26	5.2	7.1	1	23	930	953	930	953	0.94
9	16	0.13	9.9	6.5	1.2	2	21	982	1001	981	1002	0.92
10	16	0.043	3.3	7.9	5.8	1	23	1043	1066	1043	1066	0.93
11	16	0.0014	0.11	12.6	0.6	1	23	1113	1135	1113	1135	0.96
12	16	0.023	1.8	8.8	4.4	1	23	1141	1164	1141	1164	0.96
13	16	2.1	1.6e+02	2.6	2.4	1	23	1173	1196	1173	1196	0.87
14	16	0.0075	0.58	10.3	0.3	1	23	1225	1248	1225	1248	0.92
15	16	0.11	8.2	6.7	0.2	1	23	1568	1591	1568	1591	0.96
16	16	0.087	6.7	7.0	1.2	2	23	1614	1636	1613	1636	0.95

Sequence Information

Coding Sequence: ATGGCTAGAGTTCAACCATTCAAAAGAGCTGTGGACGCTATAGTCATCTATACAAAACCACATGATACGGAAATCCCACATGGAGTACAGATTAAGGAAGAGCCTATGGATACAACATCAAATGCAAccgaaaattgtatattagttaaaaattattacagttTAGTCGATCACAATTATCATCAAGGTAAATTATCATTATCTAAAAATGATGCTTTGTATAAAGACataaataatacagaaaatagGCAATCATCGAATGACGATTCTATACATTTGAATGATGTAAACAAGACTATTAATACAAAGTGTAAAAGTGTAAAACCGACAAAAGAAATGCATAACACGTTAGAATTTAAGAAACGAAAATGTTCTAAAAAAGTTtctaataagataaagcaaaaTGTTACATTAGACTGTAAAACAAATATCGAGTTATCAAGAAAATTGAGACGCTGTGACATATGCTTTAGATCTTTCTCTACTGTTAAAAGTTGTGAAGCCCATAAACTATATTACGAATTAAATGATAACTTGCGAAAAAAATCTTGCGGAACAAATGATAAATTACCGTCTCTTGGTATTAACAAAGATCCATATGCATATAAGTGTAATTTTTGCATTCGTGTTTTTTGGGAGAAAGCTTTATTACAATCTCACCTGTTTCATATTCACAATGAATTAATATGTTCTAAAAACACAATTAAACGCAAGGCTTACAAATCaaagaatataaattcatCTAAAGGTGGTCCTTTAAGTTTAACTAgtaaaaatgaagaattatGTTCAAATAATCTcagcaaagataattttaaatcagAGAAGGTAAATACTATACTTATAAATAATGTCAATGAATCTTCGGACAGCAATGTGATAAATACTGAAAACTCAAAgatcaaaaaattatttaataatgaaaagttACCAACCAAAAAATTACGGCAACCAACATTAACGGAATACcttgaattttgcaaaaagaaaCGCGATCAACTCAGtccaaataaattaaatatggaaaataattttccatcatgtACATTAGATCGAGATgaacaaaaagaagaaaatccAAAGCCAAAACTTTCAAAAGGACATAATGGTAAAATTGATTCTTTACCAATAGAATCAGATAATCTCTCAAAAACAGCACATTCTATTCTGGAACAAACAACTATGAAACATGAAATATGTTCACCTAAAAAgccatttgtaaaattacatgcaGATGTCGAAATAATGAAATCTTTTCTGGAAAACCTTTCTGATATGAATGTCGAGGATCAAATGACCAAATATGAAACAAGTGACAATGATTGTGAGGTTTCATATGATCGTGCACCACCCTACAGATTGCGACGTAGACCCTGTTATTTCATGAGAGACATTAGATACGTAAGAACAAATTTGAGATCAAAGAAGAACAAAAATGTATCTAAAGAGTCTCAAATTGACATAGAATACGATACTGAAACGAAACGGAACGTTAGTGATGTAGATCCTAAGATAGATCTTAAAGATTGGAAATCTATTATGGCTTATTTTAAGTGTAAGGAGTGTACAATTCCTTTAATAAGATGTGATGCACGTCCAAAAGATCTTTATCAGATTTCTACAATTGATACCATGAAAAACACTTCCCTTGCTACTCAGTGCAATTCTACAAATTCTGGCTCTCAATGCAACTCTTTGGTTGAAGaaagtaatgtacaaaataaaataatgctcAAGGACTTAGAGGTTTCTCTGGAACGTCTAACAGCTGTTCCAATTACAGTAAAAACAGACATAAACATCGAAAACCatgataacaattattttgtgTGTAAAGTTTGTCAAGAGAGATTTTCTTCCAAATTGGACAAACGTAGACATATTAAGTCGTCTCATATAGCATATATGTCAAGCATATGTAATGCACGATATACACTAAAGCATAAGTTACTTCAGCATTACTTATGTGAACATCTATCTCAACCAAATGAGTGTTGCATTTGTTACACGTTATTACCTGATTATGAAGCGCTGAAGCAACACTTAAATGTTCACTGTCTGAAATACATTCAAAGCAAGGACAGTCAGTATCCGATAGATATTGAGTTAAAATGCACCATGTCCGAATCTTATAATTGTCTTGGTTGTAACGAAACATTTTCGTCGCAATCATCTTTAGAGTCGCATCAAAGTTgttgcataataaaaatggaaaaaaatctGGAAGATTCCATGGAAGAAGCATATCCGAAGAACATTCCTGAGATACTGCAAAAGAACATCGATGAAAATACAGTCACATGTGATAAAGAGATTAATCGAGATGATTTACGTAAACCTGCAAATAGCGACTGTGTAGCAGAAAACTTAAACAAACAGCAAGTATCGCTTTCTAGTGCAAAAGAAGCGGAAATTAATGAGGCTACTCAAAACTTTCTTGTTAATAATAACTTAACTGAGGAGAAAAGCAAGACTGTCAACAAATTACAAGACTCTGAAGGACTTTTAGAAAATAGTAATTCCACAAGTAGCAATCAGAGTGTTACAAGTAGCAATCAGAGTGTTACAAGTACACAATTGGATAACACTACAAGAGCTAAAACTTACACTCCCTGTGATATATGTGGAAAACAATTTCAAACTCTCAAGAATTTGGAGATACATAAACGCACTTTCAGCTTTATTACCGATATCTGTCCAATGTGTGGCACTGGATTCAGTTCTAAACGTTTTTTACAGACACATATCACTGCAGCACATGTACCACATATTTCAAAGACTTATAGCTTTCATTGCGTATTCTGTAATCAAGGTTTTTTCAAAAAACACGATCTTAAGTCTCATATATTACACTTGCATAATAAACAATTGCTTAGTACACTCACGCGCAATAATGATGTGAGTGCAGGGAAATCTGATCACCCATCAATTAAGCATGTCACAACATGTAACATTTGTAATTTGGCATTTGAGACTCATGATTGTTACGTAGAACACCGGATGTACTATTATGAAAACCATACATTCCAATGTTCACTTTGTGCGCAAAACTTTCAAGGAATGTACATGTTTCATCATCACAACAAACTGGTACATTGTTCACAAGATAAACGCAAGTCGTATAGATATATTTGCGACATATGCAACGAGGGATTCAATCATGAATCACATTTTCATTCTCATAGTATGCATGTTCATTCGAAAGATTTAAATTTGGGTGAATCTGCCAAAGAATGTGGAGAAAGAAATCGTTCTGATTATTCACCCAACGTCCCGGAGAagattacaaatttttctatgGATCAACAAAAGCAAAACAAACAGTTGTCCAACGAGTATATTTGCCAAATTTGTCAGTTGAAATTTACAGATACAAGTGATATGTTAAGACACAAAGAACTTCACTCCAATGACGGTGATTTTAAATGTGACAAGTGTGACAGACGATGCAAAACAATTACTTTACTTGATCAACATAGGAAATTAACTCACATTTGTCGTGATATTTATAATGGATATGAGTGTCGTATTTGTGGCGAGGTTTTGGAAACTGTTACTTCATTAAAATGCCACGAGAAACACTTTCATTcaaatattatcaataatGATACGGATAAGCGGGAAAATAATGATGAGGTATCATCTACGAAGAATACATGTCAATTAACGAAATACAATTGTTTATTCTGCGATATGAAGTTTTCCAAAGCTAGCACTGTTCAAGCACACCTTGTTAATGTCCATATGGATGATATGATAAATAAGCAAGCTATTTTAAAACTTCCTCGTCCCATTACTAATAACAATGACTTTcagaaacaatttaaaatatctgaTCCATCATTGTCATCGAAAGATAATTCAACTCAGCTTCTTCAAAGATCAACGATTCAACATGACCTTCAGAAAAAAGTTGTTGAAACTAATCCAGCATCATCACCGAAAGATAATTCAACTCAGCTTCTCCAAAAATCAGCGGCTCTACATGATCTTCAGAAACAAGTTGTTGAAACTCATCCAGCATCATCATCGAAAGATAATTCAACTCAGCTTCTCCAAAAATCAACAACTCAACATGATCTTCAGAAACAATTTGTTGAAACTAATCCAGCATCATCATCGAAAGATAATTCGCCTCAACTTGTCCAAAGATCAACGGCTCAACAATCTGTACTTGATATCCTACTAAACAAGCGGACTAGTACTCTAACGGAAGATAAAACTGCTActgaattattaaagaaatttaaaataacgaCTAAAAGCAATGAAACTACAAAAGATACTCCAATTTCTGCAATTCCATGTATTAACAAATCTAAAGATATTTCGACAATTAGTACTATTGCACCAAATGCAGCTACCTCAGTTTCTTCATTCACTGGGCCAACAATTGCTAAAACTATCGTATCAAATACTGAATCCAAAGATAATACTTCAGTTCCTTTACCTGGATCAACTAATGATCTCCGTTACAGAAAAACTTATGGAGTGTTTTCAAAATCTGGGTCAAGCAATGAATTTAAAGCTAATTCAGTCTCATTACTGAAGAGGtctataacaaataaatcCAAAACAACACCTGTATCCTCTTTATTACCTGGACCTTCATCAACTGGATCTACACTCAAAGTAATACCACAAAGCTGGAAAAGCAATGAAATTACAAATCAGAAGTCAGTGAACCATTCTAATTCTGCTTATTCATGTCCGTTATGTCCGCTAGAGTATCCAGATTTGATGTTTTTCCATGCGCATCTCAACTATGCTCATGTAGATAGTGTTCGAACTAATAAATCTATGCcgcaaataattgaaattgaaacaaTACCTATGATAGAATGTTTATTATGTCCATGTAATTTCATGGATGAGGTCACGTATAAGAAGCACTTGAGAAATTCTCATACgtattatgtgtatatgtCAAACTCTAAAGAAACGACACAAACCAAAAACGTGTTTAATCCTTCAACAACACAGAACCGCACCACTGGAGAAAGCAAAATTCCTGAAGTAATTACTGTAGATGATGATGAGAATAACGATAATATCAAGAATACATCGAATCAACAAATAGCCGAAGTAACAGCCACGCTTGATTGTggaaaacaagataataaaattggcAAATTGAGAGTGAAGCCTTTTGCAAAGATTATTGAGACTTTATCTGCGGATTCTGCGTTGTAA
Protein Sequence: MARVQPFKRAVDAIVIYTKPHDTEIPHGVQIKEEPMDTTSNATENCILVKNYYSLVDHNYHQGKLSLSKNDALYKDINNTENRQSSNDDSIHLNDVNKTINTKCKSVKPTKEMHNTLEFKKRKCSKKVSNKIKQNVTLDCKTNIELSRKLRRCDICFRSFSTVKSCEAHKLYYELNDNLRKKSCGTNDKLPSLGINKDPYAYKCNFCIRVFWEKALLQSHLFHIHNELICSKNTIKRKAYKSKNINSSKGGPLSLTSKNEELCSNNLSKDNFKSEKVNTILINNVNESSDSNVINTENSKIKKLFNNEKLPTKKLRQPTLTEYLEFCKKKRDQLSPNKLNMENNFPSCTLDRDEQKEENPKPKLSKGHNGKIDSLPIESDNLSKTAHSILEQTTMKHEICSPKKPFVKLHADVEIMKSFLENLSDMNVEDQMTKYETSDNDCEVSYDRAPPYRLRRRPCYFMRDIRYVRTNLRSKKNKNVSKESQIDIEYDTETKRNVSDVDPKIDLKDWKSIMAYFKCKECTIPLIRCDARPKDLYQISTIDTMKNTSLATQCNSTNSGSQCNSLVEESNVQNKIMLKDLEVSLERLTAVPITVKTDINIENHDNNYFVCKVCQERFSSKLDKRRHIKSSHIAYMSSICNARYTLKHKLLQHYLCEHLSQPNECCICYTLLPDYEALKQHLNVHCLKYIQSKDSQYPIDIELKCTMSESYNCLGCNETFSSQSSLESHQSCCIIKMEKNLEDSMEEAYPKNIPEILQKNIDENTVTCDKEINRDDLRKPANSDCVAENLNKQQVSLSSAKEAEINEATQNFLVNNNLTEEKSKTVNKLQDSEGLLENSNSTSSNQSVTSSNQSVTSTQLDNTTRAKTYTPCDICGKQFQTLKNLEIHKRTFSFITDICPMCGTGFSSKRFLQTHITAAHVPHISKTYSFHCVFCNQGFFKKHDLKSHILHLHNKQLLSTLTRNNDVSAGKSDHPSIKHVTTCNICNLAFETHDCYVEHRMYYYENHTFQCSLCAQNFQGMYMFHHHNKLVHCSQDKRKSYRYICDICNEGFNHESHFHSHSMHVHSKDLNLGESAKECGERNRSDYSPNVPEKITNFSMDQQKQNKQLSNEYICQICQLKFTDTSDMLRHKELHSNDGDFKCDKCDRRCKTITLLDQHRKLTHICRDIYNGYECRICGEVLETVTSLKCHEKHFHSNIINNDTDKRENNDEVSSTKNTCQLTKYNCLFCDMKFSKASTVQAHLVNVHMDDMINKQAILKLPRPITNNNDFQKQFKISDPSLSSKDNSTQLLQRSTIQHDLQKKVVETNPASSPKDNSTQLLQKSAALHDLQKQVVETHPASSSKDNSTQLLQKSTTQHDLQKQFVETNPASSSKDNSPQLVQRSTAQQSVLDILLNKRTSTLTEDKTATELLKKFKITTKSNETTKDTPISAIPCINKSKDISTISTIAPNAATSVSSFTGPTIAKTIVSNTESKDNTSVPLPGSTNDLRYRKTYGVFSKSGSSNEFKANSVSLLKRSITNKSKTTPVSSLLPGPSSTGSTLKVIPQSWKSNEITNQKSVNHSNSAYSCPLCPLEYPDLMFFHAHLNYAHVDSVRTNKSMPQIIEIETIPMIECLLCPCNFMDEVTYKKHLRNSHTYYVYMSNSKETTQTKNVFNPSTTQNRTTGESKIPEVITVDDDENNDNIKNTSNQQIAEVTATLDCGKQDNKIGKLRVKPFAKIIETLSADSAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -