Veme007492.1
Basic Information
- Insect
- Vollenhovia emeryi
- Gene Symbol
- -
- Assembly
- GCA_000949405.1
- Location
- NW:1047069-1050260[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00017 0.092 12.4 0.7 3 43 7 45 6 46 0.94 2 10 0.011 6.4 6.5 3.8 17 44 70 98 59 98 0.88 3 10 0.0022 1.2 8.8 1.8 12 41 116 147 110 149 0.78 4 10 0.00082 0.46 10.2 2.5 12 42 164 196 155 196 0.88 5 10 0.024 13 5.5 0.7 10 27 214 228 205 247 0.77 6 10 3.7e-06 0.0021 17.6 0.5 10 39 274 303 269 309 0.83 7 10 0.013 7.3 6.3 0.7 16 40 337 363 334 367 0.86 8 10 1.7e-05 0.0095 15.5 0.2 7 41 391 424 385 425 0.81 9 10 0.0074 4.2 7.1 0.2 15 40 456 482 446 486 0.85 10 10 9.6 5.3e+03 -2.9 0.1 13 20 508 515 501 515 0.75
Sequence Information
- Coding Sequence
- ATGGAACTCGCAGAATGGATATGGAAATATTACACACAAGAAGGTCCTAATACAGTGACGTGTAACCgttgtcttgaaattttacctaATCATAACAGACTGCAAATCTTAAAATACCACTTATATGATAAACATGGAATAACAGAATTAGATGGGCATCCAGAACGTGACATCATacaggaaaattttaaaataacatgtCTAACAGCAACGTGTAATCATTGTAAAGGAAAAAGTAACCTTGCCATTTAtggtgtacatattttaataattcatttaaGAACTATTCATTcggataaatataatttaaacaagAGAAGGTCAGGTATATGGGCAAAGTACGATATAACAGACAACAAGGCAATATGCAAACAAtgcaaaagaataataaaaataaatagtaaaaaacctcaaagaaatttatatcttcACCTACATCGTTGTCGGTtcaagaagataaaaatatcacacaTATGGGACAAGTTTAACGTAAAAGAAAGCAAGGTTACGTGCAAAGAATGTAAAGGaacaataaaagtaaatagtaaaatacctacgaaaaatttaaatgttcaTCTACGTCATTGTCGGCTAAAGATGAGACGAAAAATATCACACCTATGGGACAAGTTCAATGTGATAGAAAACAAGGCTACATGcaaagaatgtaaaagaacaatattaataaatcgtGAATATATGAGAGTAGAATTAACACAacatttaatactttattgTCAttactttaataattactaCCTGGACAAATGTAAGTTAAAAGAGATGCAAAGGAGATTACGCATATGGGACAAGTACGAGGTAACTAACACCAAAGCAACATGCAGGAAATGTAAAGAAGCAATAACAATAAACCGTGACACTCCTGCAACAAATTTAAGCGAACACTTACTTCAATGTCGctACTCAAATATTGACGACCTAAGTATAGGCTCATTAACGAACTTTCGAAAACCACACGCTTGGGAAAAGTTTGTTTATTATGGAGACAGAGCGATATGCAAGCGATGTTATAAAAACCTGGAACTAAGTGGTACACGACCAATAGCACGTTTACGGAGTCACTTAAAATATTGTCGCCGCTTAAGTCTTGGTGAACTGAATAAAGATGCGTTAAAGAAGTTATGTAAAAGATCAGAAATATGGAAGAAGTTTGATGTAGATGGAAACAAGGCGATATGCCAGAAATGTAAAAAGGCACTGTCAATAAGTGGTAGAAAACCATTAGAAAATTTACGGGCTCACGTAACATCTTGTCGCGGTTTCAATATTAATGATTTAAGTAAAGATGAGTTGAAAGAATTACGAAAACAATCACAGGTATCGAAGCAGTTTGATGAAGTTGGAAACAGAGCGACATGCaagtgtaataaaattctgtCACTAAATGGTATGCAGCCATCAGCAAATTTCCGGAATCACTTAACATGGTGTcgtggaCTGAATAAAGATGAGCTAAAGAAGTTACGAAGAAACTCAGTAATATGGCAGAAGTTTGATGTAGAGGAAAACAAGGCGATATGCAAGGATCCGCCACCAAAAACAggacaaatttaa
- Protein Sequence
- MELAEWIWKYYTQEGPNTVTCNRCLEILPNHNRLQILKYHLYDKHGITELDGHPERDIIQENFKITCLTATCNHCKGKSNLAIYGVHILIIHLRTIHSDKYNLNKRRSGIWAKYDITDNKAICKQCKRIIKINSKKPQRNLYLHLHRCRFKKIKISHIWDKFNVKESKVTCKECKGTIKVNSKIPTKNLNVHLRHCRLKMRRKISHLWDKFNVIENKATCKECKRTILINREYMRVELTQHLILYCHYFNNYYLDKCKLKEMQRRLRIWDKYEVTNTKATCRKCKEAITINRDTPATNLSEHLLQCRYSNIDDLSIGSLTNFRKPHAWEKFVYYGDRAICKRCYKNLELSGTRPIARLRSHLKYCRRLSLGELNKDALKKLCKRSEIWKKFDVDGNKAICQKCKKALSISGRKPLENLRAHVTSCRGFNINDLSKDELKELRKQSQVSKQFDEVGNRATCKCNKILSLNGMQPSANFRNHLTWCRGLNKDELKKLRRNSVIWQKFDVEENKAICKDPPPKTGQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -