Veme007491.1
Basic Information
- Insect
- Vollenhovia emeryi
- Gene Symbol
- -
- Assembly
- GCA_000949405.1
- Location
- NW:1013171-1026107[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 5.3e-07 0.00029 20.4 4.7 3 43 8 46 7 47 0.97 2 15 6e-05 0.033 13.8 0.3 13 44 67 99 55 99 0.89 3 15 3e-06 0.0017 18.0 4.3 13 42 119 150 110 151 0.86 4 15 1.6 8.7e+02 -0.3 1.6 17 41 191 217 183 219 0.70 5 15 4.7e-05 0.026 14.1 0.1 2 38 239 273 238 277 0.94 6 15 0.045 25 4.6 1.6 13 29 297 313 289 329 0.72 7 15 0.026 14 5.4 0.1 14 42 357 387 347 389 0.80 8 15 8.3e-06 0.0046 16.5 1.7 12 42 415 447 407 448 0.86 9 15 0.023 13 5.5 0.2 14 27 464 477 454 481 0.77 10 15 8.6 4.8e+03 -2.7 0.0 3 11 487 495 486 505 0.83 11 15 0.56 3.1e+02 1.1 1.9 15 28 521 534 511 551 0.72 12 15 0.00033 0.18 11.4 0.5 14 32 580 601 568 614 0.77 13 15 0.00086 0.48 10.1 1.5 12 42 637 669 630 669 0.86 14 15 0.0061 3.4 7.4 0.3 16 40 701 727 694 732 0.86 15 15 0.019 11 5.8 1.5 15 42 760 789 753 789 0.87
Sequence Information
- Coding Sequence
- ATGACGTTAGTTGAAGAATGGTTGTGGAAACATTACACAAAAAAAACTTTtgacataataatatgtaatcaTTGCGAAGAAGTTTTTTCCAAACAAAATAGACTGCAAATCTTAAAACATCACTTATACGATAAACATGAAATAACGGAATTAGACGAACATCCAGACCGTGACAATATAcagcaaaattacaaaataacaaGTCTAACGGCAACATGCAACCATTGTATGAAAAGAATTGATCTTGCAATTATTGGTGTgagcattttattaattcatttaaaacTTAAGCACTCagacaaatataatttaaaagagagaaaaatatcacaTATATGGAACAGATACGATGAAAAGGGCGACAATGTAATGTGCAAAGTATGtaagaaaacaataaaattaaatagtaaaCATTTAACATCAGGTTTACGCCGACACTTAATTCATTGTCGAGGGACCAAAAATGATGATTTGGACGTACATAAGTTAATGGAAGTGCAAACAAGATCGCACGTACAATGGACGGAGTGGAAAACGTCCTTACGTAAGAAGTACATCACAACATTCACAACAACGTGCAATCGATGCAAAAAACCaataacaatttattgtaGATATCCAGCATTAAGTTTAAAAGCACACTTACGTAGTTGTCCAGCATCTACAAATAATCTTTTGGAGAAACATAAGTTAAAGAAGAAATccagaataaaagaaatatggaATTATTATGATGTAATTGACGACATGACGGTATGCAAAAGATGTAAGAGACCAATAAAAGCAGATGATAGAGTTACCTCAAACTTACACACCCACGCTCGTATTTGTGGTAATATTGAGAAGAGGAAACGAAAAGTAACACAAATATTGGACAAATTTGATATAACGGGCGACAAGGCGAAATGCAAAGGATGTAGGAAAACATTAAAAGTATGTGGTAAATATCCAGCACCAAATTTAGCTAACCACTTAAAATATTGTCGGCCACCTAAGTTCGATGAGTTTGgaagagaaataaaggaaagtttaaaaatatcacaccTATGGGACGAATACGATATAACGGGCGACCAGGCGACATGCAAAGGATGTAAGAAAATAGTAAAAGTAAATAGTAAATTTCCAAGATCAAATTTATTCCGACACTTTCGCAGTTGTCCCCGGGTAGAAGTTGATTTGCTAAAGAAAGATGAGGTGAAAACGATACGAAGACTGTCGCAAATATGGGAAAAGTTTGATGAAGACGGAGACATGATGATATGCAAACAATGTAAAAAAGCAATAAAAATGTCTAATGCAAAGACAACATCAAGTTTACACAGTCACCTTCGTCACTGTCGGCAGACACCAGAAAAAACAAACATATGGGACAATTTCGATGTAACAGGCGACAAGGCGACATGCAAAGGATGTAAGAAaacaataaaagtaaatagTAAATATCCAAGAGTCAGTGTATACAGACACTTTAATAGCTGTCCgTTAGTAAATAAAGAACCGAATAaattagagaaaaaaagaatactcTCAAAACTATGGGAGAAGTACAATATAATAGGCATAGCGACATGCAAACAATGTAAGAAAACAGTAGAAGTAAACAATAAATGTCCAAAAATAAGTTTAAAGCAGCACTTACGTTACTGTCAGTCATCTACAAGTGATCAATCGGATAAATGTAAAtcaaagaaaaaacaaaaaatcttAAAACTACGGGACAAGTACGATATAATATACAAGACAGCGACATGCATACattgtaacaaaataataaaattaaaacaaagaaaattgaatAGTAAAACTATAACATCAGCTTTAAACCTACACTTCCGTATTTGTCGtgtaagTGAAGATGGATTAAAGAAGATACGAAGAAGATCACAATTATGGGATAAGCTCAATGTAACGGGCAACAAGGCGACATGCAAAGGATGTAATAAAACAGTAAAAGTAACTAGTAGATTTCCAACAAGAAACATAGCCAGTCACTTGAAGCATTGTCCGGTATTTGCATATAATCGATTGGATACACGTAAACCAGAGGTAACACGACAAATCTCAGAACCATGGGACAAGTACGATGTAACGGGCGACACAGCGACATGCAAAGGATGTaaggaaacaataaaattaaatagtgAAACTCCAACAGCAAATTTAAACGAACACTTAGAATATTGTCGGTCATCTGAAAATAATGATATGGATAAATATAAGTTAGAGAAGATACGCAGAAAATCAATACTGTGGACCAAGTTCGATGTAACGGGTGACAGAGCAGTGTGCAAACAATGTAAGAAATCGGTAAAAGTAAATGCTAAACTGCCAACAGTTAATTTAAACCATCACTTTCGTTGTTGTCAGTTAAAGAAGGAACTAAAGTATATGATGTGA
- Protein Sequence
- MTLVEEWLWKHYTKKTFDIIICNHCEEVFSKQNRLQILKHHLYDKHEITELDEHPDRDNIQQNYKITSLTATCNHCMKRIDLAIIGVSILLIHLKLKHSDKYNLKERKISHIWNRYDEKGDNVMCKVCKKTIKLNSKHLTSGLRRHLIHCRGTKNDDLDVHKLMEVQTRSHVQWTEWKTSLRKKYITTFTTTCNRCKKPITIYCRYPALSLKAHLRSCPASTNNLLEKHKLKKKSRIKEIWNYYDVIDDMTVCKRCKRPIKADDRVTSNLHTHARICGNIEKRKRKVTQILDKFDITGDKAKCKGCRKTLKVCGKYPAPNLANHLKYCRPPKFDEFGREIKESLKISHLWDEYDITGDQATCKGCKKIVKVNSKFPRSNLFRHFRSCPRVEVDLLKKDEVKTIRRLSQIWEKFDEDGDMMICKQCKKAIKMSNAKTTSSLHSHLRHCRQTPEKTNIWDNFDVTGDKATCKGCKKTIKVNSKYPRVSVYRHFNSCPLVNKEPNKLEKKRILSKLWEKYNIIGIATCKQCKKTVEVNNKCPKISLKQHLRYCQSSTSDQSDKCKSKKKQKILKLRDKYDIIYKTATCIHCNKIIKLKQRKLNSKTITSALNLHFRICRVSEDGLKKIRRRSQLWDKLNVTGNKATCKGCNKTVKVTSRFPTRNIASHLKHCPVFAYNRLDTRKPEVTRQISEPWDKYDVTGDTATCKGCKETIKLNSETPTANLNEHLEYCRSSENNDMDKYKLEKIRRKSILWTKFDVTGDRAVCKQCKKSVKVNAKLPTVNLNHHFRCCQLKKELKYMM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -